Somatic pathogenic variants in the normal mammary gland of sporadic breast cancer patients
This dataset contains .fastq files generated by targeted DNA sequencing of 542 cancer-associated and cadidate genes (52 individuals), and targeted duplex sequencing of PIK3CA and TP53 genes (4 individuals).
- 156 samples
- DAC: EGAC00001002391
- Technologies: HiSeq X Ten, NextSeq 550
In line with the Data Processing Agreement.
In line with the Data Processing Agreement.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001005698 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005687456 | fastq.gz | 755.2 MB | ||
| EGAF00005687457 | fastq.gz | 763.7 MB | ||
| EGAF00005687459 | fastq.gz | 567.4 MB | ||
| EGAF00005687460 | fastq.gz | 575.7 MB | ||
| EGAF00005687461 | fastq.gz | 798.0 MB | ||
| EGAF00005687462 | fastq.gz | 803.4 MB | ||
| EGAF00005687463 | fastq.gz | 609.8 MB | ||
| EGAF00005687464 | fastq.gz | 627.3 MB | ||
| EGAF00005687465 | fastq.gz | 645.1 MB | ||
| EGAF00005687466 | fastq.gz | 659.4 MB | ||
| EGAF00005687467 | fastq.gz | 623.8 MB | ||
| EGAF00005687468 | fastq.gz | 634.7 MB | ||
| EGAF00005687469 | fastq.gz | 369.0 MB | ||
| EGAF00005687470 | fastq.gz | 398.3 MB | ||
| EGAF00005687471 | fastq.gz | 160.4 MB | ||
| EGAF00005687472 | fastq.gz | 162.9 MB | ||
| EGAF00005687473 | fastq.gz | 626.3 MB | ||
| EGAF00005687474 | fastq.gz | 636.7 MB | ||
| EGAF00005687475 | fastq.gz | 893.8 MB | ||
| EGAF00005687476 | fastq.gz | 908.8 MB | ||
| EGAF00005687477 | fastq.gz | 754.6 MB | ||
| EGAF00005687478 | fastq.gz | 769.8 MB | ||
| EGAF00005687479 | fastq.gz | 365.0 MB | ||
| EGAF00005687480 | fastq.gz | 372.3 MB | ||
| EGAF00005687481 | fastq.gz | 788.2 MB | ||
| EGAF00005687482 | fastq.gz | 803.9 MB | ||
| EGAF00005687483 | fastq.gz | 886.5 MB | ||
| EGAF00005687484 | fastq.gz | 902.8 MB | ||
| EGAF00005687485 | fastq.gz | 729.8 MB | ||
| EGAF00005687486 | fastq.gz | 743.2 MB | ||
| EGAF00005687487 | fastq.gz | 794.0 MB | ||
| EGAF00005687488 | fastq.gz | 818.3 MB | ||
| EGAF00005687489 | fastq.gz | 771.2 MB | ||
| EGAF00005687490 | fastq.gz | 787.7 MB | ||
| EGAF00005687491 | fastq.gz | 850.2 MB | ||
| EGAF00005687492 | fastq.gz | 865.4 MB | ||
| EGAF00005687493 | fastq.gz | 718.3 MB | ||
| EGAF00005687494 | fastq.gz | 728.8 MB | ||
| EGAF00005687495 | fastq.gz | 679.9 MB | ||
| EGAF00005687496 | fastq.gz | 689.3 MB | ||
| EGAF00005687497 | fastq.gz | 640.5 MB | ||
| EGAF00005687498 | fastq.gz | 684.8 MB | ||
| EGAF00005687499 | fastq.gz | 647.7 MB | ||
| EGAF00005687500 | fastq.gz | 664.8 MB | ||
| EGAF00005687501 | fastq.gz | 539.1 MB | ||
| EGAF00005687502 | fastq.gz | 584.5 MB | ||
| EGAF00005687503 | fastq.gz | 835.3 MB | ||
| EGAF00005687504 | fastq.gz | 869.1 MB | ||
| EGAF00005687505 | fastq.gz | 824.9 MB | ||
| EGAF00005687506 | fastq.gz | 839.7 MB | ||
| EGAF00005687507 | fastq.gz | 594.6 MB | ||
| EGAF00005687508 | fastq.gz | 661.4 MB | ||
| EGAF00005687509 | fastq.gz | 724.8 MB | ||
| EGAF00005687510 | fastq.gz | 737.7 MB | ||
| EGAF00005687511 | fastq.gz | 5.2 GB | ||
| EGAF00005687512 | fastq.gz | 5.7 GB | ||
| EGAF00005687513 | fastq.gz | 735.1 MB | ||
| EGAF00005687514 | fastq.gz | 749.7 MB | ||
| EGAF00005687515 | fastq.gz | 3.6 GB | ||
| EGAF00005687516 | fastq.gz | 4.0 GB | ||
| EGAF00005687517 | fastq.gz | 4.1 GB | ||
| EGAF00005687518 | fastq.gz | 4.7 GB | ||
| EGAF00005687519 | fastq.gz | 446.1 MB | ||
| EGAF00005687520 | fastq.gz | 456.3 MB | ||
| EGAF00005687521 | fastq.gz | 5.4 GB | ||
| EGAF00005687522 | fastq.gz | 6.1 GB | ||
| EGAF00005687523 | fastq.gz | 539.2 MB | ||
| EGAF00005687524 | fastq.gz | 548.5 MB | ||
| EGAF00005687525 | fastq.gz | 641.3 MB | ||
| EGAF00005687526 | fastq.gz | 656.6 MB | ||
| EGAF00005687527 | fastq.gz | 913.2 MB | ||
| EGAF00005687528 | fastq.gz | 924.6 MB | ||
| EGAF00005687529 | fastq.gz | 765.3 MB | ||
| EGAF00005687530 | fastq.gz | 780.6 MB | ||
| EGAF00005687531 | fastq.gz | 920.9 MB | ||
| EGAF00005687532 | fastq.gz | 944.9 MB | ||
| EGAF00005687533 | fastq.gz | 761.0 MB | ||
| EGAF00005687534 | fastq.gz | 775.3 MB | ||
| EGAF00005687535 | fastq.gz | 706.2 MB | ||
| EGAF00005687536 | fastq.gz | 717.4 MB | ||
| EGAF00005687537 | fastq.gz | 506.9 MB | ||
| EGAF00005687538 | fastq.gz | 518.3 MB | ||
| EGAF00005687539 | fastq.gz | 583.8 MB | ||
| EGAF00005687540 | fastq.gz | 600.6 MB | ||
| EGAF00005687541 | fastq.gz | 495.4 MB | ||
| EGAF00005687542 | fastq.gz | 506.6 MB | ||
| EGAF00005687543 | fastq.gz | 241.5 MB | ||
| EGAF00005687544 | fastq.gz | 248.1 MB | ||
| EGAF00005687545 | fastq.gz | 479.0 MB | ||
| EGAF00005687546 | fastq.gz | 493.0 MB | ||
| EGAF00005687547 | fastq.gz | 593.9 MB | ||
| EGAF00005687548 | fastq.gz | 614.1 MB | ||
| EGAF00005687549 | fastq.gz | 383.8 MB | ||
| EGAF00005687550 | fastq.gz | 404.3 MB | ||
| EGAF00005687551 | fastq.gz | 804.0 MB | ||
| EGAF00005687552 | fastq.gz | 826.1 MB | ||
| EGAF00005687553 | fastq.gz | 578.6 MB | ||
| EGAF00005687554 | fastq.gz | 613.3 MB | ||
| EGAF00005687555 | fastq.gz | 797.0 MB | ||
| EGAF00005687556 | fastq.gz | 831.4 MB | ||
| EGAF00005687557 | fastq.gz | 656.1 MB | ||
| EGAF00005687558 | fastq.gz | 793.1 MB | ||
| EGAF00005687559 | fastq.gz | 621.3 MB | ||
| EGAF00005687560 | fastq.gz | 665.2 MB | ||
| EGAF00005687561 | fastq.gz | 602.6 MB | ||
| EGAF00005687562 | fastq.gz | 614.6 MB | ||
| EGAF00005687563 | fastq.gz | 664.8 MB | ||
| EGAF00005687564 | fastq.gz | 682.9 MB | ||
| EGAF00005687565 | fastq.gz | 545.0 MB | ||
| EGAF00005687566 | fastq.gz | 556.5 MB | ||
| EGAF00005687567 | fastq.gz | 691.4 MB | ||
| EGAF00005687568 | fastq.gz | 703.5 MB | ||
| EGAF00005687569 | fastq.gz | 79.2 MB | ||
| EGAF00005687570 | fastq.gz | 81.8 MB | ||
| EGAF00005687571 | fastq.gz | 766.1 MB | ||
| EGAF00005687572 | fastq.gz | 780.3 MB | ||
| EGAF00005687573 | fastq.gz | 835.7 MB | ||
| EGAF00005687574 | fastq.gz | 890.7 MB | ||
| EGAF00005687575 | fastq.gz | 917.3 MB | ||
| EGAF00005687576 | fastq.gz | 941.7 MB | ||
| EGAF00005687577 | fastq.gz | 838.4 MB | ||
| EGAF00005687578 | fastq.gz | 863.7 MB | ||
| EGAF00005687579 | fastq.gz | 635.4 MB | ||
| EGAF00005687580 | fastq.gz | 647.7 MB | ||
| EGAF00005687581 | fastq.gz | 96.0 MB | ||
| EGAF00005687582 | fastq.gz | 98.9 MB | ||
| EGAF00005687583 | fastq.gz | 602.4 MB | ||
| EGAF00005687584 | fastq.gz | 614.4 MB | ||
| EGAF00005687585 | fastq.gz | 827.9 MB | ||
| EGAF00005687586 | fastq.gz | 851.1 MB | ||
| EGAF00005687587 | fastq.gz | 790.6 MB | ||
| EGAF00005687588 | fastq.gz | 814.2 MB | ||
| EGAF00005687589 | fastq.gz | 449.3 MB | ||
| EGAF00005687590 | fastq.gz | 455.6 MB | ||
| EGAF00005687591 | fastq.gz | 675.6 MB | ||
| EGAF00005687592 | fastq.gz | 691.3 MB | ||
| EGAF00005687593 | fastq.gz | 823.3 MB | ||
| EGAF00005687594 | fastq.gz | 839.9 MB | ||
| EGAF00005687595 | fastq.gz | 676.1 MB | ||
| EGAF00005687596 | fastq.gz | 694.4 MB | ||
| EGAF00005687597 | fastq.gz | 952.0 MB | ||
| EGAF00005687598 | fastq.gz | 975.9 MB | ||
| EGAF00005687599 | fastq.gz | 951.6 MB | ||
| EGAF00005687600 | fastq.gz | 981.2 MB | ||
| EGAF00005687601 | fastq.gz | 896.5 MB | ||
| EGAF00005687602 | fastq.gz | 913.4 MB | ||
| EGAF00005687603 | fastq.gz | 968.4 MB | ||
| EGAF00005687604 | fastq.gz | 989.9 MB | ||
| EGAF00005687605 | fastq.gz | 1.1 GB | ||
| EGAF00005687606 | fastq.gz | 1.1 GB | ||
| EGAF00005687607 | fastq.gz | 1.1 GB | ||
| EGAF00005687608 | fastq.gz | 1.1 GB | ||
| EGAF00005687609 | fastq.gz | 982.4 MB | ||
| EGAF00005687610 | fastq.gz | 1.0 GB | ||
| EGAF00005687611 | fastq.gz | 1.0 GB | ||
| EGAF00005687612 | fastq.gz | 1.1 GB | ||
| EGAF00005687613 | fastq.gz | 881.5 MB | ||
| EGAF00005687614 | fastq.gz | 898.8 MB | ||
| EGAF00005687615 | fastq.gz | 968.5 MB | ||
| EGAF00005687616 | fastq.gz | 989.8 MB | ||
| EGAF00005687617 | fastq.gz | 909.0 MB | ||
| EGAF00005687618 | fastq.gz | 928.5 MB | ||
| EGAF00005687619 | fastq.gz | 948.4 MB | ||
| EGAF00005687620 | fastq.gz | 967.6 MB | ||
| EGAF00005687621 | fastq.gz | 7.0 GB | ||
| EGAF00005687622 | fastq.gz | 7.9 GB | ||
| EGAF00005687623 | fastq.gz | 1.1 GB | ||
| EGAF00005687624 | fastq.gz | 1.1 GB | ||
| EGAF00005687625 | fastq.gz | 3.9 GB | ||
| EGAF00005687626 | fastq.gz | 4.4 GB | ||
| EGAF00005687627 | fastq.gz | 7.5 GB | ||
| EGAF00005687628 | fastq.gz | 8.5 GB | ||
| EGAF00005687629 | fastq.gz | 1.1 GB | ||
| EGAF00005687630 | fastq.gz | 1.1 GB | ||
| EGAF00005687631 | fastq.gz | 5.7 GB | ||
| EGAF00005687632 | fastq.gz | 6.4 GB | ||
| EGAF00005687633 | fastq.gz | 789.3 MB | ||
| EGAF00005687634 | fastq.gz | 810.1 MB | ||
| EGAF00005687635 | fastq.gz | 636.8 MB | ||
| EGAF00005687636 | fastq.gz | 643.2 MB | ||
| EGAF00005687637 | fastq.gz | 724.1 MB | ||
| EGAF00005687638 | fastq.gz | 744.5 MB | ||
| EGAF00005687639 | fastq.gz | 740.9 MB | ||
| EGAF00005687640 | fastq.gz | 765.4 MB | ||
| EGAF00005687641 | fastq.gz | 1.7 GB | ||
| EGAF00005687642 | fastq.gz | 1.7 GB | ||
| EGAF00005687643 | fastq.gz | 644.6 MB | ||
| EGAF00005687644 | fastq.gz | 678.7 MB | ||
| EGAF00005687645 | fastq.gz | 543.0 MB | ||
| EGAF00005687646 | fastq.gz | 558.8 MB | ||
| EGAF00005687647 | fastq.gz | 405.8 MB | ||
| EGAF00005687648 | fastq.gz | 413.2 MB | ||
| EGAF00005687649 | fastq.gz | 493.3 MB | ||
| EGAF00005687650 | fastq.gz | 507.4 MB | ||
| EGAF00005687651 | fastq.gz | 511.1 MB | ||
| EGAF00005687652 | fastq.gz | 531.0 MB | ||
| EGAF00005687653 | fastq.gz | 542.5 MB | ||
| EGAF00005687654 | fastq.gz | 547.2 MB | ||
| EGAF00005687655 | fastq.gz | 582.7 MB | ||
| EGAF00005687656 | fastq.gz | 594.2 MB | ||
| EGAF00005687657 | fastq.gz | 633.1 MB | ||
| EGAF00005687658 | fastq.gz | 644.8 MB | ||
| EGAF00005687659 | fastq.gz | 598.9 MB | ||
| EGAF00005687660 | fastq.gz | 608.0 MB | ||
| EGAF00005687661 | fastq.gz | 591.6 MB | ||
| EGAF00005687662 | fastq.gz | 608.8 MB | ||
| EGAF00005687663 | fastq.gz | 699.9 MB | ||
| EGAF00005687664 | fastq.gz | 705.1 MB | ||
| EGAF00005687665 | fastq.gz | 522.3 MB | ||
| EGAF00005687666 | fastq.gz | 532.4 MB | ||
| EGAF00005687667 | fastq.gz | 596.3 MB | ||
| EGAF00005687668 | fastq.gz | 605.9 MB | ||
| EGAF00005687669 | fastq.gz | 791.9 MB | ||
| EGAF00005687670 | fastq.gz | 811.9 MB | ||
| EGAF00005687671 | fastq.gz | 438.3 MB | ||
| EGAF00005687672 | fastq.gz | 446.6 MB | ||
| EGAF00005687673 | fastq.gz | 476.3 MB | ||
| EGAF00005687674 | fastq.gz | 486.3 MB | ||
| EGAF00005687675 | fastq.gz | 622.4 MB | ||
| EGAF00005687676 | fastq.gz | 637.3 MB | ||
| EGAF00005687677 | fastq.gz | 558.1 MB | ||
| EGAF00005687678 | fastq.gz | 569.8 MB | ||
| EGAF00005687679 | fastq.gz | 933.8 MB | ||
| EGAF00005687680 | fastq.gz | 964.5 MB | ||
| EGAF00005687681 | fastq.gz | 501.6 MB | ||
| EGAF00005687682 | fastq.gz | 513.3 MB | ||
| EGAF00005687683 | fastq.gz | 539.8 MB | ||
| EGAF00005687684 | fastq.gz | 553.4 MB | ||
| EGAF00005687685 | fastq.gz | 466.6 MB | ||
| EGAF00005687686 | fastq.gz | 477.1 MB | ||
| EGAF00005687687 | fastq.gz | 619.4 MB | ||
| EGAF00005687688 | fastq.gz | 626.8 MB | ||
| EGAF00005687689 | fastq.gz | 524.8 MB | ||
| EGAF00005687690 | fastq.gz | 539.0 MB | ||
| EGAF00005687691 | fastq.gz | 539.1 MB | ||
| EGAF00005687692 | fastq.gz | 549.6 MB | ||
| EGAF00005687693 | fastq.gz | 607.9 MB | ||
| EGAF00005687694 | fastq.gz | 624.5 MB | ||
| EGAF00005687695 | fastq.gz | 547.4 MB | ||
| EGAF00005687696 | fastq.gz | 561.0 MB | ||
| EGAF00005687697 | fastq.gz | 374.6 MB | ||
| EGAF00005687698 | fastq.gz | 384.4 MB | ||
| EGAF00005687699 | fastq.gz | 606.7 MB | ||
| EGAF00005687700 | fastq.gz | 758.7 MB | ||
| EGAF00005687701 | fastq.gz | 608.2 MB | ||
| EGAF00005687702 | fastq.gz | 618.7 MB | ||
| EGAF00005687703 | fastq.gz | 319.8 MB | ||
| EGAF00005687704 | fastq.gz | 328.9 MB | ||
| EGAF00005687705 | fastq.gz | 745.9 MB | ||
| EGAF00005687706 | fastq.gz | 757.4 MB | ||
| EGAF00005687707 | fastq.gz | 414.8 MB | ||
| EGAF00005687708 | fastq.gz | 428.7 MB | ||
| EGAF00005687709 | fastq.gz | 494.3 MB | ||
| EGAF00005687710 | fastq.gz | 510.1 MB | ||
| EGAF00005687711 | fastq.gz | 141.3 MB | ||
| EGAF00005687712 | fastq.gz | 147.5 MB | ||
| EGAF00005687713 | fastq.gz | 649.7 MB | ||
| EGAF00005687714 | fastq.gz | 672.6 MB | ||
| EGAF00005687715 | fastq.gz | 629.9 MB | ||
| EGAF00005687716 | fastq.gz | 649.5 MB | ||
| EGAF00005687717 | fastq.gz | 621.1 MB | ||
| EGAF00005687718 | fastq.gz | 642.5 MB | ||
| EGAF00005687719 | fastq.gz | 904.7 MB | ||
| EGAF00005687720 | fastq.gz | 931.1 MB | ||
| EGAF00005687721 | fastq.gz | 662.7 MB | ||
| EGAF00005687722 | fastq.gz | 683.8 MB | ||
| EGAF00005687723 | fastq.gz | 560.7 MB | ||
| EGAF00005687724 | fastq.gz | 574.4 MB | ||
| EGAF00005687725 | fastq.gz | 546.4 MB | ||
| EGAF00005687726 | fastq.gz | 561.8 MB | ||
| EGAF00005687727 | fastq.gz | 691.6 MB | ||
| EGAF00005687728 | fastq.gz | 712.4 MB | ||
| EGAF00005687729 | fastq.gz | 617.4 MB | ||
| EGAF00005687730 | fastq.gz | 636.0 MB | ||
| EGAF00005687731 | fastq.gz | 633.4 MB | ||
| EGAF00005687732 | fastq.gz | 650.6 MB | ||
| EGAF00005687733 | fastq.gz | 552.6 MB | ||
| EGAF00005687734 | fastq.gz | 567.3 MB | ||
| EGAF00005687735 | fastq.gz | 585.1 MB | ||
| EGAF00005687736 | fastq.gz | 606.6 MB | ||
| EGAF00005687737 | fastq.gz | 764.2 MB | ||
| EGAF00005687738 | fastq.gz | 787.9 MB | ||
| EGAF00005687739 | fastq.gz | 672.1 MB | ||
| EGAF00005687740 | fastq.gz | 687.1 MB | ||
| EGAF00005687741 | fastq.gz | 621.5 MB | ||
| EGAF00005687742 | fastq.gz | 638.6 MB | ||
| EGAF00005687743 | fastq.gz | 645.0 MB | ||
| EGAF00005687744 | fastq.gz | 659.7 MB | ||
| EGAF00005687745 | fastq.gz | 621.6 MB | ||
| EGAF00005687746 | fastq.gz | 636.7 MB | ||
| EGAF00005687747 | fastq.gz | 536.4 MB | ||
| EGAF00005687748 | fastq.gz | 547.8 MB | ||
| EGAF00005687749 | fastq.gz | 496.3 MB | ||
| EGAF00005687750 | fastq.gz | 511.8 MB | ||
| EGAF00005687751 | fastq.gz | 584.4 MB | ||
| EGAF00005687752 | fastq.gz | 597.9 MB | ||
| EGAF00005687753 | fastq.gz | 658.4 MB | ||
| EGAF00005687754 | fastq.gz | 676.2 MB | ||
| EGAF00005687757 | fastq.gz | 707.5 MB | ||
| EGAF00005687758 | fastq.gz | 719.3 MB | ||
| EGAF00005687759 | fastq.gz | 596.9 MB | ||
| EGAF00005687760 | fastq.gz | 695.7 MB | ||
| EGAF00005687761 | fastq.gz | 687.7 MB | ||
| EGAF00005687762 | fastq.gz | 696.3 MB | ||
| EGAF00005687763 | fastq.gz | 610.0 MB | ||
| EGAF00005687764 | fastq.gz | 615.9 MB | ||
| EGAF00005687765 | fastq.gz | 775.8 MB | ||
| EGAF00005687766 | fastq.gz | 787.1 MB | ||
| EGAF00005687767 | fastq.gz | 5.4 GB | ||
| EGAF00005687768 | fastq.gz | 6.0 GB | ||
| EGAF00005687769 | fastq.gz | 584.7 MB | ||
| EGAF00005687770 | fastq.gz | 613.7 MB | ||
| EGAF00005687771 | fastq.gz | 3.3 GB | ||
| EGAF00005687772 | fastq.gz | 3.6 GB | ||
| EGAF00005687773 | fastq.gz | 5.2 GB | ||
| EGAF00005687774 | fastq.gz | 5.7 GB | ||
| EGAF00005687775 | fastq.gz | 606.0 MB | ||
| EGAF00005687776 | fastq.gz | 613.7 MB | ||
| EGAF00005687777 | fastq.gz | 6.3 GB | ||
| EGAF00005687778 | fastq.gz | 7.1 GB | ||
| EGAF00005687779 | fastq.gz | 594.4 MB | ||
| EGAF00005687780 | fastq.gz | 601.1 MB | ||
| EGAF00005687781 | fastq.gz | 2.2 GB | ||
| EGAF00005687782 | fastq.gz | 2.5 GB | ||
| EGAF00005687783 | fastq.gz | 673.4 MB | ||
| EGAF00005687784 | fastq.gz | 681.1 MB | ||
| EGAF00005687785 | fastq.gz | 1.5 GB | ||
| EGAF00005687786 | fastq.gz | 1.7 GB | ||
| EGAF00005687787 | fastq.gz | 2.3 GB | ||
| EGAF00005687788 | fastq.gz | 2.6 GB | ||
| EGAF00005687789 | fastq.gz | 804.4 MB | ||
| EGAF00005687790 | fastq.gz | 811.9 MB | ||
| EGAF00005687791 | fastq.gz | 2.6 GB | ||
| EGAF00005687792 | fastq.gz | 3.0 GB | ||
| EGAF00005687803 | fastq.gz | 843.7 MB | ||
| EGAF00005687804 | fastq.gz | 861.1 MB | ||
| 336 Files (356.9 GB) | ||||