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Single nuclei sequencing of early, late-term, and early-onset pre-eclamptic decidua and villi.

Hypertensive disorders in pregnancy, of which the multisystem syndrome pre-eclampsia is the most severe, leading to preterm delivery, maternal mortality, and life-long complications. To elucidate early disease dynamics, we present the first spatio-temporal study comparing single-nuclei transcriptomes of human preterm pre-eclamptic placentae and healthy controls, contextualizing this in a comprehensive study including early and late gestational placentae. This study includes early placentae samples from the fetal part (villi; n=10), maternal part (Decidua; n=3), late placentae samples from healthy pregnancies, villi (n=6), decidua (n=4), and late placentae samples from early-onset preeclamptic pregnancies, villi (n=5) and decidua (n=5).

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Impaired cell interactions at the pre-eclamptic maternal-foetal interface.

The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. The User institution shall handle and store the Data in accordance with all applicable laws, governmental regulations, and guidelines pertaining the import, export, storage, use and disposal of data. 1. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 2. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 3. The Data are de-identified and cannot be used to re-identify the Research Patient. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that Data has been formally granted to the User Institution or is freely available without restriction. 4. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorized Personnel. The User Institution will not transfer or make available the Data in whole or in part for any secondary distribution to any person other than those within the Principal Investigator’s research group and for the declared and agreed use. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 5. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 6. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analyzing these Data. 7. The Data remain the property of the Data Producers. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. The Data remain the property of the original publishers. 8. The User Institution can elect to perform further research that would add intellectual and resource capital to these Data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005): https://www.govinfo.gov/content/pkg/FR-2005-04-11/pdf/05-7247.pdf in conformity with the Organization for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) : http://www.oecd.org/science/biotech/36198812.pdf . 9. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 10. The User Institution will notify MDC within 30 days of any changes or departures of Authorized Personnel. 11. The User Institution will notify MDC prior to any significant changes to the protocol for the Project. 12. The User Institution will notify MDC as soon as it becomes aware of a breach of the terms or conditions of this Agreement. 13. MDC may terminate this Agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 14. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this Agreement from time to time, including but not limited to specific provisions relating to the Data required by Data Producers other than MDC. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the Agreement. 15. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this Agreement. 16. The User Institution agrees to distribute a copy of these terms to the Authorized Personnel. The User Institution will procure that the Authorized Personnel comply with the terms of this Agreement. 17. This Agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this Agreement or its formation) shall be construed, interpreted and governed by the laws of Germany and shall be subject to the exclusive jurisdiction of the German courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005560966 1634570760079 6.8 GB
EGAF00005560967 1634571240068 18.5 GB
EGAF00005560968 1634570220467 4.4 GB
EGAF00005560969 1634585160017 15.6 GB
EGAF00005560970 1634569860366 4.3 GB
EGAF00005560971 1634571360087 14.8 GB
EGAF00005560972 1634570160428 4.6 GB
EGAF00005560973 1634570820090 15.9 GB
EGAF00005560974 1634570341109 4.2 GB
EGAF00005560975 1634572140077 14.7 GB
EGAF00005560976 1634570220467 7.7 GB
EGAF00005560977 1634571480342 20.5 GB
EGAF00005560978 1634570100204 4.7 GB
EGAF00005560979 1634571120097 12.9 GB
EGAF00005560980 1634570220467 3.9 GB
EGAF00005560981 1634571060054 13.6 GB
EGAF00005560982 1634569740251 2.8 GB
EGAF00005560983 1634571360087 10.3 GB
EGAF00005560984 1634569860366 1.5 GB
EGAF00005560985 1634570341109 5.4 GB
EGAF00005560986 1634570160428 3.7 GB
EGAF00005560987 1634571360087 13.0 GB
EGAF00005560988 1634570940120 6.2 GB
EGAF00005560989 1634571060054 16.1 GB
EGAF00005560990 1634570760079 7.9 GB
EGAF00005560991 1634584680031 7.8 GB
EGAF00005560992 1634569860366 1.3 GB
EGAF00005560993 1634570282001 4.2 GB
EGAF00005560994 1634570820090 5.4 GB
EGAF00005560995 1634570160428 2.9 GB
EGAF00005560996 1634570640356 6.9 GB
EGAF00005560997 1634572440053 18.2 GB
EGAF00005560998 1634570520220 15.8 GB
EGAF00005560999 1634571060054 9.0 GB
EGAF00005561000 1634570040133 3.9 GB
EGAF00005561001 1634571000189 13.8 GB
EGAF00005561002 1634570160428 3.9 GB
EGAF00005561003 1634571180099 13.8 GB
EGAF00005561004 1634569800367 1.5 GB
EGAF00005561005 1634570820090 5.4 GB
EGAF00005561006 1634571180099 8.2 GB
EGAF00005561007 1634572380080 22.5 GB
EGAF00005561008 1634570341109 6.0 GB
EGAF00005561009 1634571600157 16.4 GB
44 Files (401.1 GB)