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DIPG MEK inhibition WES

Whole exome sequencing of Diffuse intrinsic pontine gliomas, primary patient derived DIPG cell cultures and isogenic trametinib resistant clones

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ICR_pHGG_Data_Access_Policy

HUMAN GENETIC DATA ACCESS AGREEMENT FOR INSTITUTIONSBetween:(1) The Institute of Cancer Research: Royal Cancer Hospital of 123 Old Brompton Road, London SW7 3RP, UK (“ICR”); and(2) [ please insert the legal name and address of your institution ] (the “Recipient”).In response to the Recipient's request for access to the Data (as set out in Appendix A), ICR and the Recipient agree as follows:1Definitions1.1“ICR sequencing” shall mean the project undertaken by ICR to identify genetic sequence variants and mutations in paediatric High Grade Gliomas;1.2 “Data” shall mean all and any human genetic data obtained from ICR sequencing including the age, sex and tumour pathology of a Data Subject. Explicitly, Data does not include samples or biological materials;1.3 “Data Subject” shall mean the person (irrespective of state of health) to whom Data refers and who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto;1.4 “Intellectual Property” means (i) patents, designs, trade marks and trade names (whether registered or unregistered), copyright and related rights, database rights, know-how and confidential information; (ii) all other intellectual property rights and similar or equivalent rights anywhere in the world which currently exist or are recognised in the future; and (iii) applications, extensions and renewals in relation to any such rights;1.5 “Registered User” shall mean a Researcher (or an individual conducting Research under the direct supervision of that Researcher) that is employed by the Recipient and is bound by confidentiality and non-use obligations in respect of Data and who has signed this Agreement and has received acknowledgement of its acceptance. For the avoidance of doubt, “Registered User” may also include students of the Recipient, visiting academics, contractors, sub-contractors or independent consultants provided that any such individual is bound by confidentiality and non-use obligations no less onerous then those binding the Recipient’s employees;1.6 “Research” shall mean research undertaken by the Recipient that seeks to advance the understanding and treatment of cancer and closely related diseases, and work on statistical methods that may be applied to such Research as set out in ;1.7“Researcher(s)” shall mean an individual or individuals carrying out Research who:(a) in the case of an individual seeking access to Data held solely under the control of ICR, has authored a relevant peer-reviewed article that ICR can locate on PubMed and who is still working in the field; or(b) in the case of an individual seeking access to Data held as part of a wider consortium, is a successful applicant to the consortium data access committee.2Purpose2.1The Recipient agrees to use Data only for Research.3 Confidentiality3.1 The Recipient agrees to preserve, at all times, the confidentiality of Data pertaining to identifiable Data Subjects. In particular, the Recipient undertakes not to use, or attempt to use the Data to deliberately compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. Recipient or Registered Users will not use Data either alone or in conjunction with any other information in any effort whatsoever to establish the individual identities of any Data Subject from whom Data were obtained.4 Data Protection4.1 The Recipient agrees that it, and its Registered Users, are covered by and shall comply with the obligations contained in the Data Protection Act 1998 as amended from time to time, or equivalent national provisions no less onerous then those contained in the Data Protection Act. In particular, the Recipient shall be responsible for ensuring that Registered Users understand and will comply with their duties under such legislation in relation to the handling, storage and use of Data and the rights of Data Subjects.4.2 The Recipient agrees that it, and its Registered Users, shall not analyse or make any use of the Data in such a way that has the potential to:(a) lead to the identification of any Data Subject; or(b) compromise the anonymity of any Data Subject in any way.5 Access and Governance5.1 The Recipient agrees that it shall take all reasonable security precautions to keep the Data confidential, such precautions to be no less onerous than those applied in respect of the Recipient’s own confidential information.5.2 The Recipient agrees to only give access to Data, in whole or part, or any material derived from the Data, to a Registered User. The Recipient agrees that before it gives any Registered User access to Data, it shall first show the Registered User a copy of this Agreement and shall inform the Registered User that he or she must comply with the obligations contained in this Agreement and sign up to the provisions of this Agreement in the form set out at the end of this Agreement. The Recipient shall provide ICR with a copy of the Registered User’s acceptance form within thirty (30) days of the date of acceptance by the Registered User.5.3 The Recipient agrees that it shall only give Registered Users that are not Researchers (including but not limited to students or new researchers to the field) access to the Data if they are supervised by a Researcher who will take responsibility for such Registered Users’ use of the Data.5.4 ICR reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that pertaining in the European Economic Area (EEA).6Errors6.1The Recipient agrees to notify the CGP of any errors detected in the Data.7Data reissue7.1 The Recipient accepts that Data will be reissued from time to time, with suitable versioning. If Data is reissued at the request of sample donors and/or as the result of other ethical scrutiny, the Recipient agrees to destroy all earlier versions of the Data.8Intellectual Property8.1The Recipient recognises that nothing in this Agreement shall operate to transfer to the Recipient or its Registered Users any Intellectual Property rights in or relating to the Data.8.2The Data shall at all times remain the property of ICR or of ICR’s designated assignee. Recipient shall retain title to any Intellectual Property made through the Recipient’s use of the Data, except to the extent such Intellectual property incorporates the Data.8.3 The Recipient and its Registered Users shall have the right to develop Intellectual Property based on comparisons with their own data.9Publications9.1 The Recipient agrees to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the Data, and the role of the CGP and its funders in its distribution. The Recipient agrees to use the acknowledgement wording provided for the relevant Data in its publication. The Recipient will also declare in any such work that those who carried out the original analysis and collection of the Data bear no responsibility for the further analysis or interpretation of it by the Recipient.10Termination of Agreement10.1 This Agreement will terminate immediately upon any breach of the provisions of this Agreement by the Recipient or by the Recipient’s Registered Users.10.2The Recipient accepts that the changing ethical framework of human genetic research may lead to: (i) alteration to the provisions of this Agreement, in which case the Recipient may accept such alterations or terminate this Agreement; or (ii) the withdrawal of this Agreement in extreme circumstances.10.3 Either party shall have the right to terminate this Agreement with immediate effect upon giving written notice of termination to the other party.10.4 In the event that this Agreement is terminated in accordance with this Clause 10 the Recipient shall return or destroy all Data at the direction of ICR.11Costs11.1 The Recipient acknowledges that ICR shall incur costs in providing the Data to the Recipient, including but not limited to administrative costs and the cost of obtaining appropriate data storage devices. The Recipient agrees to pay, on the request of ICR, such reasonable costs as ICR may incur in providing the Data, within thirty (30) days of ICR making such a request for payment.12 Legal statement12.1The Recipient acknowledges that ICR and all other parties involved in the creation, funding or protection of the Data:(a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of the Data; and(b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of the Data, or from the unavailability of, or break in access to the Data for whatever reason.12.2 The Recipient understands that all the Data is protected by copyright and other intellectual property rights, such that duplication or sale of all of or part of the Data on any media is not permitted under any circumstances, except with the prior written consent of ICR.13 Governing Law13.1 This Agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this Agreement or its formation) shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the exclusive jurisdiction of the English courts. AGREED by the parties through their authorised signatoriesINSTITUTE OF CANCER RESEARCHAuthorised Signature:Name:Title:Date:RECIPIENT INSTITUTION:Recipient Name:Address:Telephone No:Email:Researcher Signature:Name:Title:Date:Registered User Signature:Name:Title:Date:Please send completed forms to:Chris Jones PhD FRCPathLeader, Glioma TeamDivisions of Molecular Pathology and Cancer TherapeuticsThe Institute of Cancer Research15 Cotswold Road, Sutton, Surrey SM2 5NG, UKTel: +44 (0)20 8722 4416 | Email: chris.jones@icr.ac.ukICR complies with the requirements of the Data Protection Act 1998 with regard to the collection, storage, processing and disclosure of personal information and is committed to upholding the Act's core Data Protection Principles. Information collected under the Agreement will be used for the purposes of maintaining the Agreement, and may be used for statistical reporting.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005555915 1634052840660 4.9 GB
EGAF00005555916 1634038560433 12.1 GB
EGAF00005555917 1634053800475 14.5 GB
EGAF00005555918 1634053920899 5.0 GB
EGAF00005555919 1634039400429 18.0 GB
EGAF00005555920 1634054160317 5.5 GB
EGAF00005555921 1634040407319 17.8 GB
EGAF00005555922 1634037420172 4.9 GB
EGAF00005555923 1634039280168 8.2 GB
EGAF00005555924 1634053861550 17.9 GB
EGAF00005555925 1634052180088 4.3 GB
EGAF00005555926 1634053440253 10.0 GB
EGAF00005555927 1634054400496 9.8 GB
EGAF00005555928 1634052600367 16.8 GB
EGAF00005555929 1634039040306 3.9 GB
EGAF00005555930 1634053500694 9.3 GB
EGAF00005555931 1634054622447 9.8 GB
EGAF00005555932 1634054820500 15.6 GB
EGAF00005555933 1634037900575 3.6 GB
EGAF00005555934 1634052060586 8.7 GB
EGAF00005555935 1634066460516 8.4 GB
EGAF00005555936 1634051940172 7.2 GB
EGAF00005555937 1634037720178 2.8 GB
EGAF00005555938 1634053381263 9.3 GB
EGAF00005555939 1634040840464 9.1 GB
EGAF00005555940 1634054880209 16.1 GB
EGAF00005555941 1634038200516 4.2 GB
EGAF00005555942 1634040407319 8.9 GB
EGAF00005555943 1634039940549 7.9 GB
EGAF00005555944 1634039220177 5.6 GB
EGAF00005555945 1634052000635 4.5 GB
EGAF00005555946 1634054340251 9.0 GB
EGAF00005555947 1634053321501 11.8 GB
EGAF00005555948 bam 14.5 GB
EGAF00005555949 1634037540346 3.2 GB
EGAF00005555950 1634066400048 7.5 GB
EGAF00005555951 1634039760564 10.0 GB
EGAF00005555952 1634052960227 12.0 GB
EGAF00005555953 1634052781046 3.7 GB
EGAF00005555954 1634038320360 10.6 GB
EGAF00005555955 1634052240430 7.2 GB
EGAF00005555956 1634052301247 12.8 GB
EGAF00005555957 1634052840660 10.1 GB
EGAF00005555958 1634052720702 12.7 GB
EGAF00005555959 1634053440253 18.2 GB
EGAF00005555960 bam 13.8 GB
EGAF00005555961 1634039880381 17.6 GB
EGAF00005555962 1634053861550 12.2 GB
EGAF00005555963 1634041320698 16.4 GB
EGAF00005555964 bam 6.4 GB
EGAF00005555965 1634054622447 12.5 GB
EGAF00005555966 bam 5.9 GB
EGAF00005555967 1634053561432 7.9 GB
EGAF00005555968 1634038560433 6.8 GB
EGAF00005555969 bam 6.8 GB
EGAF00005555970 1634054041168 6.7 GB
EGAF00005555971 1634036700752 6.6 MB
EGAF00005555972 1634036700752 5.9 MB
EGAF00005555973 1634036940170 6.3 MB
EGAF00005555974 1634036880316 6.3 MB
EGAF00005555975 1634036940170 5.9 MB
EGAF00005555976 1634037000652 6.5 MB
EGAF00005555977 1634037000652 6.0 MB
EGAF00005555978 1634036700752 6.4 MB
EGAF00005555979 1634036763783 6.2 MB
EGAF00005555980 1634036700752 6.3 MB
EGAF00005555981 1634036763782 6.7 MB
EGAF00005555982 1634036700752 6.0 MB
EGAF00005555983 1634036700752 5.9 MB
EGAF00005555984 1634036763782 6.1 MB
EGAF00005555985 1634036700752 6.1 MB
EGAF00005555986 1634036700752 6.1 MB
EGAF00005555987 1634036940170 6.5 MB
EGAF00005555988 1634036940170 6.1 MB
EGAF00005555989 1634036763782 6.6 MB
EGAF00005555990 1634036700752 6.0 MB
EGAF00005555991 1634036880316 7.4 MB
EGAF00005555992 1634036700752 6.3 MB
EGAF00005555993 1634036940170 6.6 MB
EGAF00005555994 1634036700752 5.9 MB
EGAF00005555995 1634036763782 6.0 MB
EGAF00005555996 1634036700752 6.0 MB
EGAF00005555997 1634037000652 6.4 MB
EGAF00005555998 1634036700752 5.8 MB
EGAF00005555999 1634036700752 5.9 MB
EGAF00005556000 1634036820378 6.4 MB
EGAF00005556001 1634036880316 6.6 MB
EGAF00005556002 1634037062266 6.6 MB
EGAF00005556003 1634037062266 6.0 MB
EGAF00005556004 1634037000652 7.3 MB
EGAF00005556005 1634065860108 6.3 MB
EGAF00005556006 1634037000652 6.0 MB
EGAF00005556007 1634037062266 5.9 MB
EGAF00005556008 1634036820378 6.0 MB
EGAF00005556009 1634037000652 7.5 MB
EGAF00005556010 1634036700752 6.3 MB
EGAF00005556011 1634036763782 6.7 MB
EGAF00005556012 1634037000652 6.1 MB
EGAF00005556013 1634036763782 7.1 MB
EGAF00005556014 1634036763782 6.1 MB
EGAF00005556015 1634036700752 6.5 MB
EGAF00005556016 1634037000652 6.2 MB
EGAF00005556017 1634037062266 6.3 MB
EGAF00005556018 1634036880316 6.0 MB
EGAF00005556019 1634036763782 5.9 MB
EGAF00005556020 1634036763782 6.2 MB
EGAF00005556021 1634037000652 6.0 MB
EGAF00005556022 1634036880316 6.7 MB
EGAF00005556023 1634036763782 6.5 MB
EGAF00005556024 1634036700752 6.0 MB
EGAF00005556025 1634037062266 7.4 MB
EGAF00005556026 1634036880316 6.2 MB
112 Files (541.2 GB)