IMCISION RNAseq
RNA sequencing of 32 primary head and neck squamous cell carcinoma (HNSCC) samples prior to treatment with neoadjuvant anti-PD-1 (n=6) or anti-PD-1 + anti-CTLA-4 (n=26) immunotherapy, and 30 paired on-treatment HNSCC samples (i.e. after neoadjuvant immunotherapy). RNA quantity used: 10ng. Library Preparation Kit: SMART Stranded Total RNA Seq Kit (Takara). Sequencing parameters: NovaSeq 6000, 2x 100 bp. File type: fastQ
- 62 samples
- DAC: EGAC00001002231
- Technology: Illumina NovaSeq 6000
Netherlands Cancer Institute
Netherlands Cancer Institute
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001005454 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005482529 | fastq.gz | 2.2 GB | ||
| EGAF00005482530 | fastq.gz | 2.3 GB | ||
| EGAF00005482531 | fastq.gz | 2.3 GB | ||
| EGAF00005482532 | fastq.gz | 2.3 GB | ||
| EGAF00005482533 | fastq.gz | 3.1 GB | ||
| EGAF00005482534 | fastq.gz | 3.2 GB | ||
| EGAF00005482543 | fastq.gz | 2.5 GB | ||
| EGAF00005482544 | fastq.gz | 2.4 GB | ||
| EGAF00005482547 | fastq.gz | 3.0 GB | ||
| EGAF00005482548 | fastq.gz | 3.0 GB | ||
| EGAF00005482549 | fastq.gz | 3.0 GB | ||
| EGAF00005482550 | fastq.gz | 3.0 GB | ||
| EGAF00005482559 | fastq.gz | 3.1 GB | ||
| EGAF00005482560 | fastq.gz | 3.1 GB | ||
| EGAF00005482561 | fastq.gz | 2.7 GB | ||
| EGAF00005482562 | fastq.gz | 2.7 GB | ||
| EGAF00005482565 | fastq.gz | 2.9 GB | ||
| EGAF00005482566 | fastq.gz | 2.9 GB | ||
| EGAF00005482573 | fastq.gz | 2.7 GB | ||
| EGAF00005482574 | fastq.gz | 2.7 GB | ||
| EGAF00005482579 | fastq.gz | 2.2 GB | ||
| EGAF00005482580 | fastq.gz | 2.2 GB | ||
| EGAF00005482583 | fastq.gz | 2.7 GB | ||
| EGAF00005482584 | fastq.gz | 2.7 GB | ||
| EGAF00005482589 | fastq.gz | 3.0 GB | ||
| EGAF00005482590 | fastq.gz | 3.1 GB | ||
| EGAF00005482593 | fastq.gz | 2.2 GB | ||
| EGAF00005482594 | fastq.gz | 2.2 GB | ||
| EGAF00005482595 | fastq.gz | 3.1 GB | ||
| EGAF00005482596 | fastq.gz | 3.1 GB | ||
| EGAF00005482597 | fastq.gz | 2.2 GB | ||
| EGAF00005482598 | fastq.gz | 2.1 GB | ||
| EGAF00005482599 | fastq.gz | 2.1 GB | ||
| EGAF00005482600 | fastq.gz | 2.1 GB | ||
| EGAF00005482607 | fastq.gz | 2.7 GB | ||
| EGAF00005482608 | fastq.gz | 2.7 GB | ||
| EGAF00005482613 | fastq.gz | 2.5 GB | ||
| EGAF00005482614 | fastq.gz | 2.6 GB | ||
| EGAF00005482615 | fastq.gz | 2.4 GB | ||
| EGAF00005482616 | fastq.gz | 2.4 GB | ||
| EGAF00005482617 | fastq.gz | 2.3 GB | ||
| EGAF00005482618 | fastq.gz | 2.3 GB | ||
| EGAF00005482637 | fastq.gz | 2.4 GB | ||
| EGAF00005482638 | fastq.gz | 2.4 GB | ||
| EGAF00005482639 | fastq.gz | 2.6 GB | ||
| EGAF00005482640 | fastq.gz | 2.7 GB | ||
| EGAF00005482641 | fastq.gz | 2.6 GB | ||
| EGAF00005482642 | fastq.gz | 2.6 GB | ||
| EGAF00005482649 | fastq.gz | 2.6 GB | ||
| EGAF00005482650 | fastq.gz | 2.7 GB | ||
| EGAF00005482651 | fastq.gz | 2.9 GB | ||
| EGAF00005482652 | fastq.gz | 2.9 GB | ||
| EGAF00005482653 | fastq.gz | 2.7 GB | ||
| EGAF00005482654 | fastq.gz | 2.8 GB | ||
| EGAF00005482655 | fastq.gz | 2.8 GB | ||
| EGAF00005482656 | fastq.gz | 2.8 GB | ||
| EGAF00005482663 | fastq.gz | 2.4 GB | ||
| EGAF00005482664 | fastq.gz | 2.4 GB | ||
| EGAF00005482665 | fastq.gz | 3.1 GB | ||
| EGAF00005482666 | fastq.gz | 3.1 GB | ||
| EGAF00005482669 | fastq.gz | 2.0 GB | ||
| EGAF00005482670 | fastq.gz | 2.1 GB | ||
| EGAF00005482671 | fastq.gz | 2.6 GB | ||
| EGAF00005482672 | fastq.gz | 2.6 GB | ||
| EGAF00005482673 | fastq.gz | 2.9 GB | ||
| EGAF00005482674 | fastq.gz | 2.8 GB | ||
| EGAF00005482687 | fastq.gz | 2.7 GB | ||
| EGAF00005482688 | fastq.gz | 2.7 GB | ||
| EGAF00005482693 | fastq.gz | 3.6 GB | ||
| EGAF00005482694 | fastq.gz | 3.7 GB | ||
| EGAF00005482695 | fastq.gz | 3.1 GB | ||
| EGAF00005482696 | fastq.gz | 3.1 GB | ||
| EGAF00005482709 | fastq.gz | 2.5 GB | ||
| EGAF00005482710 | fastq.gz | 2.6 GB | ||
| EGAF00005482711 | fastq.gz | 2.3 GB | ||
| EGAF00005482712 | fastq.gz | 2.3 GB | ||
| EGAF00005482713 | fastq.gz | 2.7 GB | ||
| EGAF00005482714 | fastq.gz | 2.8 GB | ||
| EGAF00005482715 | fastq.gz | 3.0 GB | ||
| EGAF00005482716 | fastq.gz | 3.0 GB | ||
| EGAF00005482717 | fastq.gz | 2.8 GB | ||
| EGAF00005482718 | fastq.gz | 2.9 GB | ||
| EGAF00005482719 | fastq.gz | 2.7 GB | ||
| EGAF00005482720 | fastq.gz | 2.7 GB | ||
| EGAF00005482723 | fastq.gz | 2.3 GB | ||
| EGAF00005482724 | fastq.gz | 2.3 GB | ||
| EGAF00005482727 | fastq.gz | 2.5 GB | ||
| EGAF00005482728 | fastq.gz | 2.5 GB | ||
| EGAF00005482731 | fastq.gz | 3.0 GB | ||
| EGAF00005482732 | fastq.gz | 3.0 GB | ||
| EGAF00005482733 | fastq.gz | 2.5 GB | ||
| EGAF00005482734 | fastq.gz | 2.6 GB | ||
| EGAF00005482735 | fastq.gz | 3.5 GB | ||
| EGAF00005482736 | fastq.gz | 3.6 GB | ||
| EGAF00005482737 | fastq.gz | 2.9 GB | ||
| EGAF00005482738 | fastq.gz | 2.9 GB | ||
| EGAF00005482739 | fastq.gz | 2.2 GB | ||
| EGAF00005482740 | fastq.gz | 2.2 GB | ||
| EGAF00005482741 | fastq.gz | 3.2 GB | ||
| EGAF00005482742 | fastq.gz | 3.2 GB | ||
| EGAF00005482743 | fastq.gz | 2.5 GB | ||
| EGAF00005482744 | fastq.gz | 2.5 GB | ||
| EGAF00005482745 | fastq.gz | 2.5 GB | ||
| EGAF00005482746 | fastq.gz | 2.5 GB | ||
| EGAF00005482747 | fastq.gz | 2.7 GB | ||
| EGAF00005482748 | fastq.gz | 2.7 GB | ||
| EGAF00005482749 | fastq.gz | 2.8 GB | ||
| EGAF00005482750 | fastq.gz | 2.8 GB | ||
| EGAF00005482751 | fastq.gz | 2.7 GB | ||
| EGAF00005482752 | fastq.gz | 2.8 GB | ||
| EGAF00005482753 | fastq.gz | 3.2 GB | ||
| EGAF00005482754 | fastq.gz | 3.2 GB | ||
| EGAF00005482767 | fastq.gz | 2.9 GB | ||
| EGAF00005482768 | fastq.gz | 2.9 GB | ||
| EGAF00005482769 | fastq.gz | 3.2 GB | ||
| EGAF00005482770 | fastq.gz | 3.2 GB | ||
| EGAF00005482771 | fastq.gz | 3.4 GB | ||
| EGAF00005482772 | fastq.gz | 3.5 GB | ||
| EGAF00005482773 | fastq.gz | 2.8 GB | ||
| EGAF00005482774 | fastq.gz | 2.9 GB | ||
| EGAF00005482775 | fastq.gz | 2.6 GB | ||
| EGAF00005482776 | fastq.gz | 2.7 GB | ||
| EGAF00005482777 | fastq.gz | 2.9 GB | ||
| EGAF00005482778 | fastq.gz | 2.9 GB | ||
| 124 Files (338.0 GB) | ||||