Mutation and Microsatellite Burden Predict Response to PD-1 Inhibition in Children with Germline DNA Replication Repair Deficiency: An Observational Registry Study
This dataset contains raw data from polyA RNAseq, hybrid capture target TCR panel data, and bam files from whole exome sequencing on 39 tumors with matched germline blood.
- 79 samples
- DAC: EGAC00001001936
- Technologies: Illumina HiSeq 2500, Illumina NovaSeq 6000
- DS DUO:0000007 (version: 2019-01-07)disease specific researchThis data use permission indicates that use is allowed provided it is related to the specified disease.ModifiersMONDO:0010159
- RS DUO:0000012 (version: 2019-01-07)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
- NPUNCU DUO:0000018 (version: 2019-01-07)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- IRB DUO:0000021 (version: 2019-01-07)ethics approval requiredThis data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
RRD dataset access policy
If you need to request access to this data set, please contact: Uri Tabori, Email: uri.tabori@sickkids.ca
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Whole Genome Sequencing | ||
| Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005463052 | bam | 14.2 GB | ||
| EGAF00005463053 | 1630676174308 | 12.2 GB | ||
| EGAF00005463054 | 1630675857973 | 5.4 GB | ||
| EGAF00005463055 | 1630682366222 | 8.1 GB | ||
| EGAF00005463056 | bam | 14.7 GB | ||
| EGAF00005463057 | 1630675927245 | 11.0 GB | ||
| EGAF00005463058 | 1630675712330 | 7.5 GB | ||
| EGAF00005463059 | 1630679582007 | 9.8 GB | ||
| EGAF00005463060 | 1630676525071 | 7.0 GB | ||
| EGAF00005463061 | 1630677305473 | 10.5 GB | ||
| EGAF00005463062 | 1630677305473 | 6.0 GB | ||
| EGAF00005463063 | 1630682525145 | 13.3 GB | ||
| EGAF00005463064 | bam | 14.5 GB | ||
| EGAF00005463065 | 1630679582006 | 11.3 GB | ||
| EGAF00005463066 | 1630677365167 | 12.6 GB | ||
| EGAF00005463067 | 1630676488306 | 9.1 GB | ||
| EGAF00005463068 | bam | 14.0 GB | ||
| EGAF00005463069 | bam | 14.5 GB | ||
| EGAF00005463070 | 1630679582007 | 10.4 GB | ||
| EGAF00005466437 | 1630921091040 | 10.6 GB | ||
| EGAF00005466438 | 1630920432937 | 12.8 GB | ||
| EGAF00005466439 | 1630921205248 | 10.6 GB | ||
| EGAF00005466440 | 1630921205248 | 10.5 GB | ||
| EGAF00005466441 | 1630919524917 | 713.1 MB | ||
| EGAF00005466442 | 1630919468510 | 727.9 MB | ||
| EGAF00005466443 | 1630920184984 | 10.3 GB | ||
| EGAF00005466444 | 1630937945334 | 9.1 GB | ||
| EGAF00005466445 | 1634060220221 | 12.2 GB | ||
| EGAF00005466446 | 1630920305047 | 11.1 GB | ||
| EGAF00005466447 | 1630933348766 | 8.8 GB | ||
| EGAF00005466448 | 1630921270691 | 11.2 GB | ||
| EGAF00005466449 | 1630921630937 | 14.7 GB | ||
| EGAF00005466450 | 1630921270691 | 9.7 GB | ||
| EGAF00005466451 | 1630920551725 | 9.8 GB | ||
| EGAF00005466452 | 1634060220221 | 13.0 GB | ||
| EGAF00005466453 | 1630921684927 | 10.0 GB | ||
| EGAF00005466454 | 1630920845321 | 9.0 GB | ||
| EGAF00005466455 | bam | 14.4 GB | ||
| EGAF00005466456 | bam | 14.3 GB | ||
| EGAF00005466457 | 1630920064048 | 9.3 GB | ||
| EGAF00005466458 | 1634060220221 | 12.7 GB | ||
| EGAF00005466459 | 1630921330989 | 12.0 GB | ||
| EGAF00005466460 | 1630920845321 | 9.2 GB | ||
| EGAF00005466461 | 1630921810808 | 16.4 GB | ||
| EGAF00005466462 | 1630919468510 | 897.0 MB | ||
| EGAF00005466463 | 1630919344333 | 911.7 MB | ||
| EGAF00005466464 | 1630920305047 | 10.6 GB | ||
| EGAF00005466465 | 1630920184984 | 9.2 GB | ||
| EGAF00005466466 | 1634061060027 | 13.0 GB | ||
| EGAF00005466467 | 1634060940092 | 11.3 GB | ||
| EGAF00005466468 | 1630920730615 | 11.9 GB | ||
| EGAF00005466469 | bam | 5.9 GB | ||
| EGAF00005466470 | 1634060220221 | 12.2 GB | ||
| EGAF00005466471 | 1630920245227 | 6.4 GB | ||
| EGAF00005466472 | 1634067120044 | 13.4 GB | ||
| EGAF00005466473 | 1630921511106 | 17.2 GB | ||
| EGAF00005466474 | 1630919524917 | 764.4 MB | ||
| EGAF00005466475 | 1630919468510 | 770.9 MB | ||
| EGAF00005466476 | 1630919344333 | 190.6 MB | ||
| EGAF00005466477 | 1630919284108 | 197.2 MB | ||
| EGAF00005466478 | 1634066940166 | 11.5 GB | ||
| EGAF00005466479 | 1630921385108 | 10.7 GB | ||
| EGAF00005466480 | 1630920064048 | 11.1 GB | ||
| EGAF00005466481 | bam | 6.6 GB | ||
| EGAF00005466482 | 1630920730615 | 8.8 GB | ||
| EGAF00005466483 | 1630920905286 | 8.2 GB | ||
| EGAF00005466484 | 1630920551725 | 10.2 GB | ||
| EGAF00005466485 | 1630927346756 | 9.8 GB | ||
| EGAF00005466486 | 1630920432937 | 10.3 GB | ||
| EGAF00005466487 | 1630920972641 | 11.0 GB | ||
| EGAF00005466488 | 1630921091040 | 10.0 GB | ||
| EGAF00005466489 | 1630921151891 | 9.0 GB | ||
| EGAF00005466490 | 1634066880131 | 12.4 GB | ||
| EGAF00005466491 | 1630921091040 | 10.1 GB | ||
| EGAF00005466492 | bam | 5.7 GB | ||
| EGAF00005466493 | 1630921385108 | 12.0 GB | ||
| EGAF00005466494 | 1630920611086 | 9.2 GB | ||
| 77 Files (750.9 GB) | ||||