OxyTarget mtDNA seq
We studied 44 rectal cancer patients enrolled onto a prospective population-based biomarker study, who were planned for curative-intent radiation therapy before definitive surgery, yet at high risk of metastatic progression beyond the pelvic cavity. The patients had full-length mtDNA sequencing of whole blood (WB) and peripheral blood mononuclear cells (PBMC), sampled at the time of diagnosis. Metastatic events were recorded up to 60 months of follow-up after completion of the multimodal treatment.
- 66 samples
- DAC: EGAC00001002268
- Technology: Illumina MiSeq
European standardization framework for data integration and data-driven in silico models for personalized medicine – EU-STANDS4PM
Access to data will be in concordance with the European standardization framework for data integration and data-driven in silico models for personalized medicine – EU-STANDS4PM (https://www.eu-stands4pm.eu/home). 1. The Data Recipient agree to only use the Data for the Purpose of the Project. 2. The Data Recipient agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. The Data Recipient undertake not to use or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 3. The Data Recipient agree not to attempt to identify Data Subjects. 4. The Data Recipient and its Authorised Personnel agree to take into consideration any usage restrictions (if any), stemming from consent, i.e. the appropriate lawful basis for processing the Data, as well as any usage restrictions stemming from any applicable internal policies of your Institution. 5. 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The Data Recipient may not transfer the Data itself to anyone outside the Institution, unless the Controller(s) has (have) approved such transfer and its terms in writing. 17. Should the Data Recipient wish to share the Data with an external collaborator, the external collaborator must complete a separate Data Access Agreement. 18. The Data Recipient shall ensure that ‘all’ who have Access to the Data, namely the Data Recipient and its Authorised Personnel, will be listed out, and are made aware and be bound by the terms of this Agreement. The Data Recipient remain solely and fully responsible for its Authorised Personnel’s non-compliance with the provision of the Agreement and/or applicable laws. 19. 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Further, the language of the proceedings will be ‘English’ if not otherwise agreed. The award of the arbitration will be final and binding upon the parties concerned. 24. This Agreement (and any dispute, controversy, proceedings, or claim of whatever nature arising out of it or its formation) shall be interpreted, governed by and construed in accordance with the Laws of England and Wales, and shall be subject to the exclusive jurisdiction of the English Courts.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00005432975 | 1629028947921 | 54.2 MB | ||
EGAF00005432976 | 1629028947921 | 121.1 MB | ||
EGAF00005432977 | 1629028947921 | 37.7 MB | ||
EGAF00005432978 | 1629029045186 | 667.2 MB | ||
EGAF00005432979 | 1629029045186 | 111.3 MB | ||
EGAF00005432980 | 1629028947921 | 103.9 MB | ||
EGAF00005432981 | 1629029045186 | 123.9 MB | ||
EGAF00005432982 | bam | 404.7 MB | ||
EGAF00005432983 | 1629029045186 | 583.1 MB | ||
EGAF00005432984 | 1629029045186 | 119.9 MB | ||
EGAF00005432985 | 1629028947921 | 31.8 MB | ||
EGAF00005432986 | 1629029045186 | 506.3 MB | ||
EGAF00005432987 | 1629028947921 | 223.8 MB | ||
EGAF00005432988 | 1629028947921 | 115.7 MB | ||
EGAF00005432989 | 1629028947921 | 124.8 MB | ||
EGAF00005432990 | bam | 495.2 MB | ||
EGAF00005432991 | 1629028947921 | 33.4 MB | ||
EGAF00005432992 | bam | 499.5 MB | ||
EGAF00005432993 | bam | 401.7 MB | ||
EGAF00005432994 | 1629029045186 | 115.7 MB | ||
EGAF00005432995 | 1629029045186 | 62.1 MB | ||
EGAF00005432996 | 1629029045186 | 88.6 MB | ||
EGAF00005432997 | 1629029045186 | 249.8 MB | ||
EGAF00005432998 | 1629028947921 | 57.1 MB | ||
EGAF00005432999 | 1629029045186 | 215.6 MB | ||
EGAF00005433000 | bam | 355.7 MB | ||
EGAF00005433001 | 1629029045186 | 514.0 MB | ||
EGAF00005433002 | 1629029045186 | 884.3 MB | ||
EGAF00005433003 | 1629028947921 | 106.2 MB | ||
EGAF00005433004 | 1629029045186 | 685.5 MB | ||
EGAF00005433005 | bam | 388.3 MB | ||
EGAF00005433006 | 1629028947921 | 217.9 MB | ||
EGAF00005433007 | 1629028947921 | 64.2 MB | ||
EGAF00005433008 | 1629028947921 | 37.7 MB | ||
EGAF00005433009 | 1629028947921 | 116.1 MB | ||
EGAF00005433010 | 1629028947921 | 116.8 MB | ||
EGAF00005433011 | 1629028947921 | 107.9 MB | ||
EGAF00005433012 | 1629029045186 | 103.3 MB | ||
EGAF00005433013 | 1629028947921 | 38.5 MB | ||
EGAF00005433014 | 1629029045186 | 169.8 MB | ||
EGAF00005433015 | 1629028947921 | 29.2 MB | ||
EGAF00005433016 | 1629029045186 | 115.9 MB | ||
EGAF00005433017 | bam | 365.2 MB | ||
EGAF00005433018 | bam | 390.0 MB | ||
EGAF00005433019 | bam | 421.9 MB | ||
EGAF00005433020 | bam | 380.1 MB | ||
EGAF00005433021 | 1629029045186 | 533.0 MB | ||
EGAF00005433022 | 1629029045186 | 533.7 MB | ||
EGAF00005433023 | bam | 469.1 MB | ||
EGAF00005433024 | 1629029045186 | 115.1 MB | ||
EGAF00005433025 | 1629028947921 | 112.9 MB | ||
EGAF00005433026 | bam | 422.1 MB | ||
EGAF00005433027 | bam | 387.2 MB | ||
EGAF00005433028 | 1629029045186 | 512.6 MB | ||
EGAF00005433029 | 1629028947921 | 155.5 MB | ||
EGAF00005433030 | 1629029045186 | 113.8 MB | ||
EGAF00005433031 | 1629028947921 | 32.2 MB | ||
EGAF00005433032 | 1629028947921 | 48.3 MB | ||
EGAF00005433033 | 1629028947921 | 136.6 MB | ||
EGAF00005433034 | 1629028947921 | 117.2 MB | ||
EGAF00005433035 | 1629040143251 | 99.0 MB | ||
EGAF00005433036 | 1629028947921 | 168.2 MB | ||
EGAF00005433037 | 1629028947921 | 116.0 MB | ||
EGAF00005433038 | 1629028947921 | 140.6 MB | ||
EGAF00005433039 | 1629028947921 | 163.0 MB | ||
EGAF00005433040 | 1629029045186 | 97.5 MB | ||
66 Files (15.6 GB) |