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Human liver mtDNA sequencing

BAM files containing paired-end mtDNA sequencing data from morphologically normal human liver. Clonal CCO-deficient patches of hepatocytes were identified in human liver samples, and samples were taken along a line spanning approximately from the portal triad to the central hepatic vein. Individual BAM files are named according to their patch, line and cut, where cut 1 is nearest to the portal triad, and cuts 2, 3 etc. lying further from the portal triad. Other file types include "Bulk" samples, contain sequencing data of the remaining CCO-deficient cells that were not sampled as part of the line of cuts, and "Stroma" control samples (used for identifying germ-line variants). Sequenced on NextSeq 500 platform.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005539 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005432635 bam 95.3 MB
EGAF00005432636 bam 69.7 MB
EGAF00005432637 bam 112.3 MB
EGAF00005432638 bam 62.7 MB
EGAF00005432639 bam 142.1 MB
EGAF00005432640 bam 92.6 MB
EGAF00005432641 bam 96.3 MB
EGAF00005432642 bam 207.7 MB
EGAF00005432643 bam 102.7 MB
EGAF00005432644 bam 97.0 MB
EGAF00005432645 bam 73.9 MB
EGAF00005432646 bam 183.2 MB
EGAF00005432647 bam 79.0 MB
EGAF00005432648 bam 49.7 MB
EGAF00005432649 bam 82.0 MB
EGAF00005432650 bam 74.1 MB
EGAF00005432651 bam 151.7 MB
EGAF00005432652 bam 110.0 MB
EGAF00005432653 bam 77.1 MB
EGAF00005432654 bam 118.6 MB
EGAF00005432655 bam 145.3 MB
EGAF00005432656 bam 107.6 MB
EGAF00005432657 bam 300.3 MB
EGAF00005432658 bam 59.1 MB
EGAF00005432659 bam 59.7 MB
EGAF00005432660 bam 65.9 MB
EGAF00005432661 bam 140.2 MB
EGAF00005432662 bam 121.3 MB
EGAF00005432663 bam 86.5 MB
EGAF00005432664 bam 118.8 MB
EGAF00005432665 bam 131.7 MB
EGAF00005432666 bam 106.0 MB
EGAF00005432667 bam 41.7 MB
EGAF00005432668 bam 96.3 MB
EGAF00005432669 bam 128.5 MB
EGAF00005432670 bam 121.4 MB
EGAF00005432671 bam 42.3 MB
EGAF00005432672 bam 79.3 MB
EGAF00005432673 bam 94.0 MB
EGAF00005432674 bam 67.5 MB
EGAF00005432675 bam 275.9 MB
EGAF00005432676 bam 135.6 MB
EGAF00005432677 bam 144.0 MB
EGAF00005432678 bam 154.4 MB
EGAF00005432679 bam 148.5 MB
EGAF00005432680 bam 88.7 MB
EGAF00005432681 bam 131.4 MB
EGAF00005432682 bam 108.6 MB
EGAF00005432683 bam 210.9 MB
EGAF00005432684 bam 42.0 MB
EGAF00005432685 bam 122.6 MB
EGAF00005432686 bam 97.9 MB
EGAF00005432687 bam 71.0 MB
EGAF00005432688 bam 122.8 MB
EGAF00005432689 bam 46.4 MB
EGAF00005432690 bam 100.1 MB
EGAF00005432691 bam 102.1 MB
EGAF00005432692 bam 209.8 MB
EGAF00005432693 bam 131.8 MB
EGAF00005432694 bam 102.2 MB
EGAF00005432695 bam 110.8 MB
EGAF00005432696 bam 45.3 MB
EGAF00005432697 bam 90.9 MB
EGAF00005432698 bam 119.9 MB
EGAF00005432699 bam 77.8 MB
EGAF00005432700 bam 134.4 MB
EGAF00005432701 bam 102.1 MB
EGAF00005432702 bam 71.5 MB
EGAF00005432703 bam 152.0 MB
EGAF00005432704 bam 15.4 MB
EGAF00005432705 bam 107.3 MB
EGAF00005432706 bam 84.6 MB
EGAF00005432707 bam 50.9 MB
EGAF00005432708 bam 213.2 MB
EGAF00005432709 bam 58.2 MB
EGAF00005432710 bam 40.5 MB
EGAF00005432711 bam 132.8 MB
EGAF00005432712 bam 166.8 MB
EGAF00005432713 bam 125.8 MB
EGAF00005432714 bam 105.9 MB
EGAF00005432715 bam 133.6 MB
EGAF00005432716 bam 56.2 MB
EGAF00005432717 bam 127.4 MB
EGAF00005432718 bam 119.8 MB
EGAF00005432719 bam 70.9 MB
EGAF00005432720 bam 116.7 MB
EGAF00005432721 bam 95.5 MB
EGAF00005432722 bam 90.4 MB
EGAF00005432723 bam 93.3 MB
EGAF00005432724 bam 261.6 MB
EGAF00005432725 bam 50.5 MB
EGAF00005432726 bam 135.3 MB
EGAF00005432727 bam 141.7 MB
EGAF00005432728 bam 83.9 MB
EGAF00005432729 bam 84.0 MB
EGAF00005432730 bam 68.1 MB
EGAF00005432731 bam 103.8 MB
EGAF00005432732 bam 123.2 MB
EGAF00005432733 bam 111.0 MB
EGAF00005432734 bam 109.1 MB
EGAF00005432735 bam 101.5 MB
EGAF00005432736 bam 74.6 MB
EGAF00005432737 bam 121.3 MB
EGAF00005432738 bam 149.3 MB
EGAF00005432739 bam 109.6 MB
EGAF00005432740 bam 144.3 MB
EGAF00005432741 bam 94.0 MB
EGAF00005432742 bam 95.9 MB
EGAF00005432743 bam 137.7 MB
EGAF00005432744 bam 109.6 MB
EGAF00005432745 bam 190.0 MB
EGAF00005432746 bam 150.2 MB
EGAF00005432747 bam 128.3 MB
EGAF00005432748 bam 48.7 MB
EGAF00005432749 bam 86.0 MB
EGAF00005432750 bam 119.8 MB
EGAF00005432751 bam 38.2 MB
EGAF00005432752 bam 106.5 MB
EGAF00005432753 bam 60.4 MB
EGAF00005432754 bam 86.8 MB
EGAF00005432755 bam 112.4 MB
EGAF00005432756 bam 71.0 MB
EGAF00005432757 bam 104.1 MB
EGAF00005432758 bam 203.6 MB
EGAF00005432759 bam 139.6 MB
EGAF00005432760 bam 58.3 MB
EGAF00005432761 bam 92.2 MB
EGAF00005432762 bam 134.4 MB
EGAF00005432763 bam 74.3 MB
EGAF00005432764 bam 117.1 MB
EGAF00005432765 bam 64.3 MB
EGAF00005432766 bam 139.9 MB
EGAF00005432767 bam 74.5 MB
EGAF00005432768 bam 100.8 MB
EGAF00005432769 bam 128.6 MB
EGAF00005432770 bam 138.7 MB
EGAF00005432771 bam 157.2 MB
EGAF00005432772 bam 111.8 MB
EGAF00005432773 bam 99.8 MB
EGAF00005432774 bam 56.8 MB
EGAF00005432775 bam 145.3 MB
EGAF00005432776 bam 116.0 MB
EGAF00005432777 bam 99.2 MB
EGAF00005432778 bam 87.4 MB
EGAF00005432779 bam 126.3 MB
EGAF00005432780 bam 80.0 MB
EGAF00005432781 bam 116.4 MB
EGAF00005432782 bam 111.8 MB
EGAF00005432783 bam 89.8 MB
EGAF00005432784 bam 63.9 MB
EGAF00005432785 bam 121.6 MB
EGAF00005432786 bam 78.7 MB
EGAF00005432787 bam 97.9 MB
EGAF00005432788 bam 113.2 MB
EGAF00005432789 bam 99.5 MB
EGAF00005432790 bam 76.7 MB
EGAF00005432791 bam 121.0 MB
EGAF00005432792 bam 61.9 MB
EGAF00005432793 bam 152.6 MB
EGAF00005432794 bam 52.5 MB
EGAF00005432795 bam 120.2 MB
EGAF00005432796 bam 81.6 MB
EGAF00005432797 bam 126.2 MB
EGAF00005432798 bam 155.8 MB
EGAF00005432799 bam 122.7 MB
EGAF00005432800 bam 80.4 MB
EGAF00005432801 bam 72.8 MB
EGAF00005432802 bam 123.5 MB
EGAF00005432803 bam 85.5 MB
EGAF00005432804 bam 207.2 MB
EGAF00005432805 bam 63.2 MB
EGAF00005432806 bam 64.3 MB
EGAF00005432807 bam 85.5 MB
EGAF00005432808 bam 95.3 MB
EGAF00005432809 bam 125.1 MB
EGAF00005432810 bam 172.9 MB
EGAF00005432811 bam 157.8 MB
EGAF00005432812 bam 67.4 MB
EGAF00005432813 bam 172.7 MB
EGAF00005432814 bam 119.7 MB
EGAF00005432815 bam 90.1 MB
EGAF00005432816 bam 131.6 MB
EGAF00005432817 bam 130.2 MB
EGAF00005432818 bam 105.6 MB
EGAF00005432819 bam 106.1 MB
EGAF00005432820 bam 103.4 MB
EGAF00005432821 bam 94.4 MB
EGAF00005432822 bam 58.0 MB
EGAF00005432823 bam 128.5 MB
EGAF00005432824 bam 264.3 MB
EGAF00005432825 bam 106.5 MB
EGAF00005432826 bam 91.2 MB
EGAF00005432827 bam 94.5 MB
EGAF00005432828 bam 238.8 MB
EGAF00005432829 bam 108.4 MB
EGAF00005432830 bam 164.9 MB
EGAF00005432831 bam 93.1 MB
EGAF00005432832 bam 75.5 MB
EGAF00005432833 bam 181.8 MB
EGAF00005432834 bam 46.5 MB
EGAF00005432835 bam 121.8 MB
EGAF00005432836 bam 165.6 MB
EGAF00005432837 bam 161.2 MB
EGAF00005432838 bam 165.2 MB
EGAF00005432839 bam 90.7 MB
EGAF00005432840 bam 116.7 MB
EGAF00005432841 bam 63.6 MB
EGAF00005432842 bam 160.2 MB
EGAF00005432843 bam 83.6 MB
EGAF00005432844 bam 121.2 MB
EGAF00005432845 bam 103.9 MB
EGAF00005432846 bam 96.9 MB
EGAF00005432847 bam 14.1 MB
EGAF00005432848 bam 74.2 MB
EGAF00005432849 bam 126.8 MB
EGAF00005432850 bam 91.2 MB
EGAF00005432851 bam 128.5 MB
EGAF00005432852 bam 141.9 MB
EGAF00005432853 bam 142.7 MB
EGAF00005432854 bam 112.8 MB
EGAF00005432855 bam 99.5 MB
EGAF00005432856 bam 54.4 MB
EGAF00005432857 bam 262.1 MB
EGAF00005432858 bam 93.4 MB
EGAF00005432859 bam 74.5 MB
EGAF00005432860 bam 358.3 MB
EGAF00005432861 bam 146.4 MB
EGAF00005432862 bam 57.6 MB
EGAF00005432863 bam 91.9 MB
EGAF00005432864 bam 48.1 MB
EGAF00005432865 bam 97.8 MB
EGAF00005432866 bam 235.5 MB
EGAF00005432867 bam 121.5 MB
EGAF00005432868 bam 58.2 MB
EGAF00005432869 bam 155.7 MB
EGAF00005432870 bam 124.5 MB
EGAF00005432871 bam 53.7 MB
EGAF00005432872 bam 108.6 MB
EGAF00005432873 bam 118.6 MB
EGAF00005432874 bam 143.2 MB
EGAF00005432875 bam 90.7 MB
EGAF00005432876 bam 138.3 MB
EGAF00005432877 bam 116.9 MB
EGAF00005432878 bam 61.4 MB
EGAF00005432879 bam 65.3 MB
EGAF00005432880 bam 129.7 MB
EGAF00005432881 bam 148.6 MB
EGAF00005432882 bam 147.2 MB
EGAF00005432883 bam 93.2 MB
EGAF00005432884 bam 152.0 MB
EGAF00005432885 bam 58.5 MB
EGAF00005432886 bam 140.1 MB
EGAF00005432887 bam 82.1 MB
EGAF00005432888 bam 133.8 MB
EGAF00005432889 bam 101.0 MB
EGAF00005432890 bam 36.2 MB
EGAF00005432891 bam 137.2 MB
EGAF00005432892 bam 161.8 MB
EGAF00005432893 bam 123.8 MB
EGAF00005432894 bam 65.0 MB
EGAF00005432895 bam 60.1 MB
EGAF00005432896 bam 69.7 MB
EGAF00005432897 bam 68.0 MB
EGAF00005432898 bam 79.5 MB
EGAF00005432899 bam 187.4 MB
EGAF00005432900 bam 122.3 MB
EGAF00005432901 bam 534.5 MB
EGAF00005432902 bam 123.8 MB
EGAF00005432903 bam 76.0 MB
EGAF00005432904 bam 97.0 MB
EGAF00005432905 bam 91.1 MB
EGAF00005432906 bam 78.6 MB
EGAF00005432907 bam 103.7 MB
EGAF00005432908 bam 103.3 MB
EGAF00005432909 bam 102.3 MB
EGAF00005432910 bam 76.4 MB
EGAF00005432911 bam 43.9 MB
EGAF00005432912 bam 98.2 MB
EGAF00005432913 bam 164.8 MB
EGAF00005432914 bam 182.3 MB
EGAF00005432915 bam 141.4 MB
EGAF00005432916 bam 140.8 MB
EGAF00005432917 bam 108.7 MB
EGAF00005432918 bam 94.2 MB
EGAF00005432919 bam 80.1 MB
EGAF00005432920 bam 115.0 MB
EGAF00005432921 bam 152.8 MB
EGAF00005432922 bam 156.7 MB
EGAF00005432923 bam 116.5 MB
EGAF00005432924 bam 74.0 MB
EGAF00005432925 bam 95.4 MB
EGAF00005432926 bam 52.1 MB
EGAF00005432927 bam 87.6 MB
EGAF00005432928 bam 94.7 MB
EGAF00005432929 bam 86.9 MB
EGAF00005432930 bam 87.4 MB
EGAF00005432931 bam 113.2 MB
EGAF00005432932 bam 87.3 MB
EGAF00005432933 bam 50.3 MB
EGAF00005432934 bam 94.7 MB
EGAF00005432935 bam 119.1 MB
EGAF00005432936 bam 69.9 MB
EGAF00005432937 bam 98.3 MB
EGAF00005432938 bam 62.5 MB
EGAF00005432939 bam 250.0 MB
EGAF00005432940 bam 94.7 MB
EGAF00005432941 bam 60.7 MB
EGAF00005432942 bam 294.6 MB
EGAF00005432943 bam 78.0 MB
EGAF00005432944 bam 161.1 MB
EGAF00005432945 bam 109.3 MB
EGAF00005432946 bam 119.9 MB
EGAF00005432947 bam 81.6 MB
EGAF00005432948 bam 78.0 MB
EGAF00005432949 bam 83.0 MB
EGAF00005432950 bam 97.8 MB
EGAF00005432951 bam 181.0 MB
EGAF00005432952 bam 97.0 MB
EGAF00005432953 bam 99.6 MB
319 Files (35.7 GB)