Single-cell multi-omics analysis of COVID-19 patients with pre-existing autoimmune diseases
Single-cell analysis of the transcriptome, T cell immune receptors, and surface proteome (CITE-seq) from peripheral blood mononuclear cells (PBMCs) of COVID-19 patients with pre-existing autoimmune diseases (rheumatoid arthritis n = 5, psoriasis n = 4, or multiple sclerosis n = 3), as well as COVID-19 patients without pre-existing autoimmunity as controls (n = 10) to investigate altered immune responses.
- 27 samples
- DAC: EGAC00001000205
- Technology: Illumina NovaSeq 6000
Wellcome Trust Sanger Institute Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005415087 | 1628194606732 | 15.1 GB | ||
| EGAF00005415088 | 1628179330370 | 13.1 GB | ||
| EGAF00005415089 | 1628181282061 | 19.7 GB | ||
| EGAF00005415090 | 1628182573796 | 14.2 GB | ||
| EGAF00005415103 | 1628178584922 | 2.9 GB | ||
| EGAF00005415104 | 1628181845528 | 3.4 GB | ||
| EGAF00005415105 | 1628181845528 | 2.4 GB | ||
| EGAF00005415106 | 1628177642895 | 2.7 GB | ||
| EGAF00005415119 | 1628179330370 | 1.4 GB | ||
| EGAF00005415120 | 1628178584922 | 2.0 GB | ||
| EGAF00005415121 | 1628179330370 | 1.6 GB | ||
| EGAF00005415122 | 1628180035668 | 1.8 GB | ||
| EGAF00005415135 | 1628204120812 | 17.0 GB | ||
| EGAF00005415136 | 1628196733715 | 6.8 GB | ||
| EGAF00005415137 | 1628182573795 | 20.1 GB | ||
| EGAF00005415138 | 1628183233162 | 18.7 GB | ||
| EGAF00005415151 | 1628183233162 | 3.0 GB | ||
| EGAF00005415152 | 1628181845528 | 3.5 GB | ||
| EGAF00005415153 | 1628179330370 | 3.2 GB | ||
| EGAF00005415154 | 1628181282060 | 3.6 GB | ||
| EGAF00005415167 | 1628181282061 | 2.6 GB | ||
| EGAF00005415168 | 1628176833356 | 2.3 GB | ||
| EGAF00005415169 | 1628178584922 | 1.5 GB | ||
| EGAF00005415170 | 1628177642894 | 1.9 GB | ||
| EGAF00005415411 | 1628176833356 | 3.4 GB | ||
| EGAF00005415412 | 1628176100054 | 5.3 GB | ||
| EGAF00005415413 | 1628183233161 | 7.0 GB | ||
| EGAF00005415414 | 1628176100054 | 1.9 GB | ||
| EGAF00005415415 | 1628179330370 | 4.2 GB | ||
| EGAF00005415416 | 1628180035668 | 4.0 GB | ||
| EGAF00005415417 | 1628180035668 | 5.4 GB | ||
| EGAF00005415418 | 1628181845528 | 5.2 GB | ||
| EGAF00005415419 | 1628180673561 | 5.5 GB | ||
| EGAF00005415420 | 1628178584922 | 4.7 GB | ||
| EGAF00005415421 | 1628176100054 | 3.0 GB | ||
| EGAF00005415422 | 1628185745856 | 4.2 GB | ||
| EGAF00005415459 | 1628176833355 | 973.3 MB | ||
| EGAF00005415460 | 1628176100054 | 752.0 MB | ||
| EGAF00005415461 | 1628173777137 | 746.7 MB | ||
| EGAF00005415462 | 1628173777137 | 691.6 MB | ||
| EGAF00005415463 | 1628174993686 | 909.1 MB | ||
| EGAF00005415464 | 1628174993686 | 746.0 MB | ||
| EGAF00005415465 | 1628173777137 | 721.4 MB | ||
| EGAF00005415466 | 1628176100054 | 667.3 MB | ||
| EGAF00005415467 | 1628173777137 | 871.0 MB | ||
| EGAF00005415468 | 1628179330370 | 897.0 MB | ||
| EGAF00005415469 | 1628174993686 | 830.7 MB | ||
| EGAF00005415470 | 1628173777137 | 493.6 MB | ||
| EGAF00005415475 | 1628177642895 | 1.3 GB | ||
| EGAF00005415477 | 1628174993686 | 1.6 GB | ||
| EGAF00005415480 | 1628174993686 | 1.5 GB | ||
| EGAF00005415481 | 1628173777137 | 1.0 GB | ||
| EGAF00005415484 | 1628174993686 | 1.4 GB | ||
| EGAF00005415485 | 1628176833356 | 1.1 GB | ||
| EGAF00005415487 | 1628173777138 | 1.1 GB | ||
| EGAF00005415489 | 1628174993686 | 1.4 GB | ||
| EGAF00005415491 | 1628176833356 | 1.4 GB | ||
| EGAF00005415494 | 1628173777137 | 950.1 MB | ||
| EGAF00005415495 | 1628178584922 | 1.7 GB | ||
| EGAF00005415498 | 1628174993686 | 928.1 MB | ||
| EGAF00005415555 | 1628180035668 | 3.4 GB | ||
| EGAF00005415556 | 1628181282060 | 5.3 GB | ||
| EGAF00005415557 | 1628186675945 | 7.0 GB | ||
| EGAF00005415558 | 1628173777137 | 1.9 GB | ||
| EGAF00005415559 | 1628174993686 | 4.2 GB | ||
| EGAF00005415560 | 1628177642895 | 4.0 GB | ||
| EGAF00005415561 | 1628177642895 | 5.4 GB | ||
| EGAF00005415562 | 1628181282060 | 5.2 GB | ||
| EGAF00005415563 | 1628181282060 | 5.4 GB | ||
| EGAF00005415564 | 1628182573795 | 4.7 GB | ||
| EGAF00005415565 | 1628177642895 | 3.0 GB | ||
| EGAF00005415566 | 1630728565777 | 4.1 GB | ||
| EGAF00005415603 | 1628176100054 | 944.0 MB | ||
| EGAF00005415604 | 1628174993686 | 731.9 MB | ||
| EGAF00005415605 | 1628176100054 | 722.7 MB | ||
| EGAF00005415606 | 1628173777137 | 668.7 MB | ||
| EGAF00005415607 | 1628173777137 | 875.2 MB | ||
| EGAF00005415608 | 1628173167625 | 721.7 MB | ||
| EGAF00005415609 | 1628173777137 | 698.2 MB | ||
| EGAF00005415610 | 1628173167625 | 640.8 MB | ||
| EGAF00005415611 | 1628176100054 | 836.2 MB | ||
| EGAF00005415612 | 1628176833355 | 868.5 MB | ||
| EGAF00005415613 | 1628173777137 | 805.3 MB | ||
| EGAF00005415614 | 1628173167624 | 478.2 MB | ||
| EGAF00005415619 | 1628173208557 | 1.3 GB | ||
| EGAF00005415621 | 1628177642895 | 1.6 GB | ||
| EGAF00005415624 | 1628173167624 | 1.5 GB | ||
| EGAF00005415625 | 1628173167624 | 1.0 GB | ||
| EGAF00005415628 | 1628173167624 | 1.3 GB | ||
| EGAF00005415629 | 1628173167624 | 1.1 GB | ||
| EGAF00005415631 | 1628173167624 | 1.1 GB | ||
| EGAF00005415633 | 1628173167624 | 1.4 GB | ||
| EGAF00005415635 | 1628173777137 | 1.3 GB | ||
| EGAF00005415638 | 1628176833355 | 928.8 MB | ||
| EGAF00005415639 | 1628173167624 | 1.7 GB | ||
| EGAF00005415642 | 1628173777137 | 910.3 MB | ||
| EGAF00005415699 | 1628174993686 | 3.4 GB | ||
| EGAF00005415700 | 1628176100054 | 5.3 GB | ||
| EGAF00005415701 | 1628180035668 | 7.0 GB | ||
| EGAF00005415702 | 1628177642894 | 1.9 GB | ||
| EGAF00005415703 | 1628174993686 | 4.2 GB | ||
| EGAF00005415704 | 1628179330370 | 4.0 GB | ||
| EGAF00005415705 | 1628176100054 | 5.4 GB | ||
| EGAF00005415706 | 1628184848312 | 5.1 GB | ||
| EGAF00005415707 | 1628181282061 | 5.4 GB | ||
| EGAF00005415708 | 1628176833355 | 4.6 GB | ||
| EGAF00005415709 | 1628179330370 | 3.0 GB | ||
| EGAF00005415710 | 1628174993686 | 4.1 GB | ||
| EGAF00005415747 | 1628176833355 | 943.7 MB | ||
| EGAF00005415748 | 1628174993686 | 731.5 MB | ||
| EGAF00005415749 | 1628174993686 | 723.3 MB | ||
| EGAF00005415750 | 1628174993686 | 671.2 MB | ||
| EGAF00005415751 | 1628176100054 | 877.3 MB | ||
| EGAF00005415752 | 1628174993686 | 723.8 MB | ||
| EGAF00005415753 | 1628176100054 | 698.4 MB | ||
| EGAF00005415754 | 1628174993686 | 643.4 MB | ||
| EGAF00005415755 | 1628177642894 | 838.9 MB | ||
| EGAF00005415756 | 1628174993686 | 870.0 MB | ||
| EGAF00005415757 | 1628176833355 | 807.8 MB | ||
| EGAF00005415758 | 1628176833355 | 478.3 MB | ||
| EGAF00005415763 | 1628177642894 | 1.3 GB | ||
| EGAF00005415765 | 1628177642894 | 1.6 GB | ||
| EGAF00005415768 | 1628178584922 | 1.5 GB | ||
| EGAF00005415769 | 1628176100054 | 1.0 GB | ||
| EGAF00005415772 | 1628178584922 | 1.4 GB | ||
| EGAF00005415773 | 1628177642895 | 1.1 GB | ||
| EGAF00005415775 | 1628176833356 | 1.1 GB | ||
| EGAF00005415777 | 1628176833356 | 1.4 GB | ||
| EGAF00005415779 | 1628174993686 | 1.3 GB | ||
| EGAF00005415782 | 1628176100054 | 941.8 MB | ||
| EGAF00005415783 | 1628176100054 | 1.7 GB | ||
| EGAF00005415786 | 1628174993686 | 922.8 MB | ||
| EGAF00005415843 | 1628178584922 | 2.7 GB | ||
| EGAF00005415844 | 1628178584922 | 3.3 GB | ||
| EGAF00005415845 | 1628176100054 | 2.6 GB | ||
| EGAF00005415846 | 1628180673561 | 3.4 GB | ||
| EGAF00005415847 | 1628184224008 | 3.5 GB | ||
| EGAF00005415848 | 1628176833356 | 2.9 GB | ||
| EGAF00005415849 | 1628177642895 | 2.4 GB | ||
| EGAF00005415850 | 1628181282060 | 4.0 GB | ||
| EGAF00005415851 | 1628177642895 | 2.5 GB | ||
| EGAF00005415852 | 1628179330370 | 2.8 GB | ||
| EGAF00005415853 | 1628176100054 | 2.8 GB | ||
| EGAF00005415854 | 1628177642894 | 1.8 GB | ||
| EGAF00005415855 | 1628179330370 | 3.9 GB | ||
| EGAF00005415856 | 1628181845528 | 5.2 GB | ||
| EGAF00005415857 | 1628184224008 | 5.5 GB | ||
| EGAF00005415858 | 1628179330370 | 2.6 GB | ||
| EGAF00005415859 | 1628180035668 | 11.0 GB | ||
| EGAF00005415860 | 1628178584922 | 11.8 GB | ||
| EGAF00005415861 | 1628183233161 | 10.2 GB | ||
| EGAF00005415862 | 1628196733715 | 12.8 GB | ||
| EGAF00005415863 | 1628201349308 | 20.5 GB | ||
| EGAF00005415864 | 1628189945744 | 13.5 GB | ||
| EGAF00005415865 | 1628183233161 | 5.2 GB | ||
| EGAF00005415866 | 1628189945744 | 16.1 GB | ||
| EGAF00005415867 | 1628183233161 | 13.9 GB | ||
| EGAF00005415868 | 1628181282060 | 16.1 GB | ||
| EGAF00005415869 | 1628194606732 | 11.5 GB | ||
| EGAF00005415870 | 1628181845528 | 9.8 GB | ||
| EGAF00005415871 | 1628188686084 | 11.2 GB | ||
| EGAF00005415872 | 1628193589494 | 11.2 GB | ||
| EGAF00005415873 | 1628196733715 | 18.1 GB | ||
| EGAF00005415874 | 1628184224008 | 10.0 GB | ||
| EGAF00005415875 | 1628183233161 | 1.8 GB | ||
| EGAF00005415876 | 1628179330370 | 1.8 GB | ||
| EGAF00005415877 | 1628177642894 | 98.4 MB | ||
| EGAF00005415878 | 1628181282061 | 2.0 GB | ||
| EGAF00005415879 | 1628179330370 | 1.6 GB | ||
| EGAF00005415880 | 1628177642894 | 1.3 GB | ||
| EGAF00005415881 | 1628177642894 | 1.4 GB | ||
| EGAF00005415882 | 1628179330370 | 1.8 GB | ||
| EGAF00005415883 | 1628179330370 | 1.3 GB | ||
| EGAF00005415884 | 1628184224008 | 1.6 GB | ||
| EGAF00005415885 | 1628177642895 | 1.7 GB | ||
| EGAF00005415886 | 1628180035668 | 1.5 GB | ||
| EGAF00005415887 | 1628178584922 | 1.9 GB | ||
| EGAF00005415888 | 1628181845528 | 1.4 GB | ||
| EGAF00005415889 | 1628179330370 | 1.8 GB | ||
| EGAF00005415890 | 1628179330370 | 1.2 GB | ||
| EGAF00005423442 | 1628604713240 | 3.2 kB | ||
| EGAF00005423443 | 1628604354123 | 508.0 kB | ||
| 182 Files (677.5 GB) | ||||