Single-cell RNA-seq of matched primary GBM tumours, patient-derived organoids, and gliomasphere lines
Single-cell RNA-seq of primary GBM tumours and matched patient-derived organoids and gliomasphere lines. Obtained using the 10X Genomics single-cell 3' expression solution (v2 chemistry). Primary samples and PDOs from 12 tumours from 10 patients (10 primary, two recurrent), and gliomasphere lines from a subset of five tumours. Samples were obtained from two spatially distinct regions of each tumour.
- 99 samples
- DAC: EGAC00000000011
- Technology: Illumina HiSeq 2500
- RS DUO:0000012 (version: 2021-02-23)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
- RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
- TS DUO:0000025 (version: 2021-02-23)time limit on useThis data use modifier indicates that use is approved for a specific number of months.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
BC Cancer, part of the Provincial Health Services Authority - Data Access Policy
Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005403704 | 1627440870256 | 2.1 GB | ||
| EGAF00005403705 | 1627446969096 | 2.8 GB | ||
| EGAF00005403706 | 1627443949889 | 2.4 GB | ||
| EGAF00005403707 | 1627443949889 | 3.3 GB | ||
| EGAF00005403708 | 1627443949889 | 2.4 GB | ||
| EGAF00005403709 | 1627443949889 | 3.3 GB | ||
| EGAF00005403710 | 1627443949889 | 2.6 GB | ||
| EGAF00005403711 | 1627443949889 | 3.5 GB | ||
| EGAF00005403712 | 1627440870256 | 2.2 GB | ||
| EGAF00005403713 | 1627443949889 | 2.9 GB | ||
| EGAF00005403714 | 1627443949889 | 2.5 GB | ||
| EGAF00005403715 | 1627443949889 | 3.4 GB | ||
| EGAF00005403716 | 1627443949889 | 3.1 GB | ||
| EGAF00005403717 | 1627446969096 | 4.3 GB | ||
| EGAF00005403718 | 1627443949889 | 3.0 GB | ||
| EGAF00005403719 | 1627446969096 | 4.2 GB | ||
| EGAF00005403720 | 1627446969096 | 3.5 GB | ||
| EGAF00005403721 | 1627450799579 | 4.9 GB | ||
| EGAF00005403722 | 1627446969095 | 3.3 GB | ||
| EGAF00005403723 | 1627446969095 | 4.7 GB | ||
| EGAF00005403724 | 1627443949889 | 2.9 GB | ||
| EGAF00005403725 | 1627446969095 | 4.0 GB | ||
| EGAF00005403726 | 1627446969095 | 2.9 GB | ||
| EGAF00005403727 | 1627443949889 | 4.0 GB | ||
| EGAF00005403728 | 1627446969095 | 2.8 GB | ||
| EGAF00005403729 | 1627446969095 | 4.0 GB | ||
| EGAF00005403730 | 1627443949889 | 3.1 GB | ||
| EGAF00005403731 | 1627446969095 | 4.4 GB | ||
| EGAF00005403732 | 1627446969095 | 3.3 GB | ||
| EGAF00005403733 | 1627446969095 | 4.6 GB | ||
| EGAF00005403734 | 1627446969095 | 3.3 GB | ||
| EGAF00005403735 | 1627446969095 | 4.7 GB | ||
| EGAF00005403736 | 1627443949889 | 2.7 GB | ||
| EGAF00005403737 | 1627443949889 | 3.7 GB | ||
| EGAF00005403738 | 1627443949889 | 3.3 GB | ||
| EGAF00005403739 | 1627450799579 | 4.6 GB | ||
| EGAF00005403740 | 1627443949889 | 3.2 GB | ||
| EGAF00005403741 | 1627446969095 | 4.5 GB | ||
| EGAF00005403742 | 1627443949889 | 3.1 GB | ||
| EGAF00005403743 | 1627446969095 | 4.4 GB | ||
| EGAF00005403744 | 1627443949889 | 3.0 GB | ||
| EGAF00005403745 | 1627446969095 | 4.1 GB | ||
| EGAF00005403746 | 1627443949889 | 3.1 GB | ||
| EGAF00005403747 | 1627446969095 | 4.3 GB | ||
| EGAF00005403748 | 1627443949889 | 3.1 GB | ||
| EGAF00005403749 | 1627446969095 | 4.3 GB | ||
| EGAF00005403750 | 1627443949889 | 2.9 GB | ||
| EGAF00005403751 | 1627446969095 | 4.1 GB | ||
| EGAF00005403752 | 1627443949889 | 2.9 GB | ||
| EGAF00005403753 | 1627446969095 | 4.1 GB | ||
| EGAF00005403754 | 1627443949889 | 3.0 GB | ||
| EGAF00005403755 | 1627446969095 | 4.3 GB | ||
| EGAF00005403756 | 1627443949889 | 2.7 GB | ||
| EGAF00005403757 | 1627443949889 | 3.7 GB | ||
| EGAF00005403758 | 1627443949889 | 3.0 GB | ||
| EGAF00005403759 | 1627446969095 | 4.1 GB | ||
| EGAF00005403760 | 1627443949889 | 2.9 GB | ||
| EGAF00005403761 | 1627443949889 | 4.1 GB | ||
| EGAF00005403762 | 1627443949889 | 3.0 GB | ||
| EGAF00005403763 | 1627446969095 | 4.2 GB | ||
| EGAF00005403764 | 1627443949889 | 2.8 GB | ||
| EGAF00005403765 | 1627446969096 | 3.9 GB | ||
| EGAF00005403766 | 1627443949889 | 3.1 GB | ||
| EGAF00005403767 | 1627446969096 | 4.4 GB | ||
| EGAF00005403768 | 1627443949889 | 3.1 GB | ||
| EGAF00005403769 | 1627446969096 | 4.4 GB | ||
| EGAF00005403770 | 1627446969096 | 2.9 GB | ||
| EGAF00005403771 | 1627446969096 | 4.0 GB | ||
| EGAF00005403772 | 1627446969095 | 3.3 GB | ||
| EGAF00005403773 | 1627446969095 | 4.6 GB | ||
| EGAF00005403774 | 1627443949889 | 3.2 GB | ||
| EGAF00005403775 | 1627450799579 | 4.5 GB | ||
| EGAF00005403776 | 1627443949889 | 3.3 GB | ||
| EGAF00005403777 | 1627446969096 | 4.6 GB | ||
| EGAF00005403778 | 1627440870256 | 2.2 GB | ||
| EGAF00005403779 | 1627443949889 | 3.1 GB | ||
| EGAF00005403780 | 1627443949889 | 2.3 GB | ||
| EGAF00005403781 | 1627443949889 | 3.3 GB | ||
| EGAF00005403782 | 1627443949889 | 2.4 GB | ||
| EGAF00005403783 | 1627443949889 | 3.4 GB | ||
| EGAF00005403784 | 1627443949889 | 2.4 GB | ||
| EGAF00005403785 | 1627446969096 | 3.3 GB | ||
| EGAF00005403786 | 1627443949889 | 2.2 GB | ||
| EGAF00005403787 | 1627443949889 | 3.1 GB | ||
| EGAF00005403788 | 1627446969096 | 2.4 GB | ||
| EGAF00005403789 | 1627443949889 | 3.4 GB | ||
| EGAF00005403790 | 1627443949889 | 2.5 GB | ||
| EGAF00005403791 | 1627443949889 | 3.4 GB | ||
| EGAF00005403792 | 1627443949889 | 2.6 GB | ||
| EGAF00005403793 | 1627443949889 | 3.7 GB | ||
| EGAF00005403794 | 1627443949889 | 2.6 GB | ||
| EGAF00005403795 | 1627443949889 | 3.6 GB | ||
| EGAF00005403796 | 1627443949889 | 2.6 GB | ||
| EGAF00005403797 | 1627446969095 | 3.6 GB | ||
| EGAF00005403798 | 1627443949889 | 2.5 GB | ||
| EGAF00005403799 | 1627446969095 | 3.5 GB | ||
| EGAF00005403800 | 1627443949889 | 2.4 GB | ||
| EGAF00005403801 | 1627443949889 | 3.4 GB | ||
| EGAF00005403802 | 1627443949889 | 2.7 GB | ||
| EGAF00005403803 | 1627446969095 | 3.7 GB | ||
| EGAF00005403804 | 1627443949889 | 2.5 GB | ||
| EGAF00005403805 | 1627443949889 | 3.4 GB | ||
| EGAF00005403806 | 1627443949889 | 2.6 GB | ||
| EGAF00005403807 | 1627446969095 | 3.5 GB | ||
| EGAF00005403808 | 1627443949889 | 2.6 GB | ||
| EGAF00005403809 | 1627446969095 | 3.6 GB | ||
| EGAF00005403810 | 1627443949889 | 2.5 GB | ||
| EGAF00005403811 | 1627443949889 | 3.6 GB | ||
| EGAF00005403812 | 1627443949889 | 2.3 GB | ||
| EGAF00005403813 | 1627443949889 | 3.4 GB | ||
| EGAF00005403814 | 1627443949889 | 2.6 GB | ||
| EGAF00005403815 | 1627446969095 | 3.7 GB | ||
| EGAF00005403816 | 1627443949889 | 2.6 GB | ||
| EGAF00005403817 | 1627443949889 | 3.8 GB | ||
| EGAF00005403818 | 1627443949889 | 2.7 GB | ||
| EGAF00005403819 | 1627443949889 | 3.9 GB | ||
| EGAF00005403820 | 1627443949889 | 2.3 GB | ||
| EGAF00005403821 | 1627443949889 | 3.4 GB | ||
| EGAF00005403822 | 1627443949889 | 2.6 GB | ||
| EGAF00005403823 | 1627443949889 | 3.8 GB | ||
| EGAF00005403824 | 1627443949889 | 2.8 GB | ||
| EGAF00005403825 | 1627446969095 | 4.1 GB | ||
| EGAF00005403826 | 1627443949889 | 2.6 GB | ||
| EGAF00005403827 | 1627446969095 | 3.6 GB | ||
| EGAF00005403828 | 1627443949889 | 2.5 GB | ||
| EGAF00005403829 | 1627443949889 | 3.5 GB | ||
| EGAF00005403830 | 1627443949889 | 2.6 GB | ||
| EGAF00005403831 | 1627443949889 | 3.6 GB | ||
| EGAF00005403832 | 1627443949889 | 2.8 GB | ||
| EGAF00005403833 | 1627446969095 | 3.9 GB | ||
| EGAF00005403834 | 1627443949889 | 2.6 GB | ||
| EGAF00005403835 | 1627446969095 | 3.7 GB | ||
| EGAF00005403836 | 1627443949889 | 2.8 GB | ||
| EGAF00005403837 | 1627443949889 | 3.8 GB | ||
| EGAF00005403838 | 1627443949889 | 2.8 GB | ||
| EGAF00005403839 | 1627446969095 | 3.9 GB | ||
| EGAF00005403840 | 1627443949889 | 2.9 GB | ||
| EGAF00005403841 | 1627443949889 | 4.0 GB | ||
| EGAF00005403842 | 1627446969095 | 2.8 GB | ||
| EGAF00005403843 | 1627443949889 | 4.1 GB | ||
| EGAF00005403844 | 1627443949889 | 3.1 GB | ||
| EGAF00005403845 | 1627446969095 | 4.4 GB | ||
| EGAF00005403846 | 1627446969095 | 2.8 GB | ||
| EGAF00005403847 | 1627443949889 | 4.0 GB | ||
| EGAF00005403848 | 1627443949889 | 2.8 GB | ||
| EGAF00005403849 | 1627443949889 | 4.0 GB | ||
| EGAF00005403850 | 1627443949889 | 3.0 GB | ||
| EGAF00005403851 | 1627446969095 | 4.3 GB | ||
| EGAF00005403852 | 1627443949889 | 2.8 GB | ||
| EGAF00005403853 | 1627443949889 | 4.0 GB | ||
| EGAF00005403854 | 1627446969095 | 3.3 GB | ||
| EGAF00005403855 | 1627446969095 | 4.8 GB | ||
| EGAF00005403856 | 1627443949889 | 2.9 GB | ||
| EGAF00005403857 | 1627446969095 | 3.9 GB | ||
| EGAF00005403858 | 1627443949889 | 2.8 GB | ||
| EGAF00005403859 | 1627443949889 | 3.7 GB | ||
| EGAF00005403860 | 1627443949889 | 2.6 GB | ||
| EGAF00005403861 | 1627443949889 | 3.5 GB | ||
| EGAF00005403862 | 1627446969095 | 2.9 GB | ||
| EGAF00005403863 | 1627446969095 | 3.7 GB | ||
| EGAF00005403864 | 1627443949889 | 2.9 GB | ||
| EGAF00005403865 | 1627443949889 | 3.9 GB | ||
| EGAF00005403866 | 1627443949889 | 2.9 GB | ||
| EGAF00005403867 | 1627446969095 | 3.8 GB | ||
| EGAF00005403868 | 1627443949889 | 2.9 GB | ||
| EGAF00005403869 | 1627450799579 | 3.8 GB | ||
| EGAF00005403870 | 1627450799579 | 2.8 GB | ||
| EGAF00005403871 | 1627446969096 | 3.7 GB | ||
| EGAF00005403872 | 1627443949889 | 2.7 GB | ||
| EGAF00005403873 | 1627443949889 | 3.8 GB | ||
| EGAF00005403874 | 1627443949889 | 2.8 GB | ||
| EGAF00005403875 | 1627443949889 | 3.9 GB | ||
| EGAF00005403876 | 1627443949889 | 2.8 GB | ||
| EGAF00005403877 | 1627443949889 | 4.0 GB | ||
| EGAF00005403878 | 1627443949889 | 2.7 GB | ||
| EGAF00005403879 | 1627446969095 | 3.8 GB | ||
| EGAF00005403880 | 1627443949889 | 2.7 GB | ||
| EGAF00005403881 | 1627450799579 | 3.8 GB | ||
| EGAF00005403882 | 1627443949889 | 2.6 GB | ||
| EGAF00005403883 | 1627446969095 | 3.7 GB | ||
| EGAF00005403884 | 1627443949889 | 2.6 GB | ||
| EGAF00005403885 | 1627443949889 | 3.6 GB | ||
| EGAF00005403886 | 1627443949889 | 2.6 GB | ||
| EGAF00005403887 | 1627443949889 | 3.6 GB | ||
| EGAF00005403888 | 1627443949889 | 3.5 GB | ||
| EGAF00005403889 | 1627446969095 | 4.9 GB | ||
| EGAF00005403890 | 1627443949889 | 2.9 GB | ||
| EGAF00005403891 | 1627446969095 | 4.1 GB | ||
| EGAF00005403892 | 1627443949889 | 3.3 GB | ||
| EGAF00005403893 | 1627446969095 | 4.6 GB | ||
| EGAF00005403894 | 1627446969096 | 3.6 GB | ||
| EGAF00005403895 | 1627446969096 | 5.0 GB | ||
| EGAF00005403896 | 1627443949889 | 3.5 GB | ||
| EGAF00005403897 | 1627446969096 | 4.9 GB | ||
| EGAF00005403898 | 1627443949889 | 3.6 GB | ||
| EGAF00005403899 | 1627446969095 | 4.9 GB | ||
| EGAF00005403900 | 1627446969096 | 3.9 GB | ||
| EGAF00005403901 | 1627450799579 | 5.5 GB | ||
| 198 Files (669.8 GB) | ||||