UCL COVID-19 Single-cell PBMC
Single-cell multi-omic profiling of COVID19 patients recruited from University College London. Data represent RNA-seq, surface protein measurements (CITE-seq) of 192 antibody targets, along with VDJ-seq profiling of single T cell and B cell receptors. Samples are pooled, with 4 donors per pool. Germ-line genotypes derived from previous single-cell RNA-sequencing are provided (VCF) to aid demultiplexing of single-cell and assignment to specific patient donor samples.
- 10/08/2021
- 21 samples
- DAC: EGAC00001002222
- Technology: Illumina NovaSeq 6000
Data sharing of Single-cell multi-omic profiling of human PBMCs, including adaptive immune cell receptor sequences derived from a cross-center cohort of COVID-19, & respiratory disease patients, along with healthy controls recruited via University College London.
Dummy policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005394161 | 1627375711978 | 3.8 GB | ||
| EGAF00005394164 | 1627375711978 | 3.9 GB | ||
| EGAF00005394167 | 1627375711978 | 3.4 GB | ||
| EGAF00005394170 | 1627375711978 | 3.4 GB | ||
| EGAF00005394173 | 1627375711978 | 3.6 GB | ||
| EGAF00005394176 | 1627375711978 | 4.1 GB | ||
| EGAF00005394179 | 1627378106946 | 3.0 GB | ||
| EGAF00005394182 | 1627378106946 | 4.3 GB | ||
| EGAF00005394185 | 1627378106946 | 2.3 GB | ||
| EGAF00005394188 | 1627378106946 | 4.3 GB | ||
| EGAF00005394191 | 1627378106946 | 1.5 GB | ||
| EGAF00005394192 | 1627378106946 | 13.4 GB | ||
| EGAF00005394193 | 1627378106946 | 13.0 GB | ||
| EGAF00005394194 | 1627378106946 | 887.5 MB | ||
| EGAF00005394195 | 1627378106946 | 7.9 GB | ||
| EGAF00005394196 | 1627378106946 | 8.1 GB | ||
| EGAF00005394197 | 1627378106946 | 10.3 GB | ||
| EGAF00005394198 | 1627378106946 | 1.1 GB | ||
| EGAF00005394199 | 1627378106946 | 10.1 GB | ||
| EGAF00005394200 | 1627378106946 | 8.4 GB | ||
| EGAF00005394201 | 1627378106946 | 8.8 GB | ||
| EGAF00005394202 | 1627378106946 | 1.2 GB | ||
| EGAF00005394203 | 1627378106946 | 10.0 GB | ||
| EGAF00005394204 | 1627378106946 | 968.5 MB | ||
| EGAF00005394205 | 1627378106946 | 8.5 GB | ||
| EGAF00005394206 | 1627378106946 | 8.8 GB | ||
| EGAF00005394207 | 1627378106946 | 901.3 MB | ||
| EGAF00005394208 | 1627378106946 | 7.3 GB | ||
| EGAF00005394209 | 1627378106946 | 7.6 GB | ||
| EGAF00005394210 | 1627378106946 | 504.1 MB | ||
| EGAF00005394211 | 1627378106946 | 392.7 MB | ||
| EGAF00005394212 | 1627378106946 | 3.9 GB | ||
| EGAF00005394213 | 1627378106946 | 5.0 GB | ||
| EGAF00005394214 | 1627378106946 | 3.9 GB | ||
| EGAF00005394215 | 1627378106946 | 512.5 MB | ||
| EGAF00005394216 | 1627378106946 | 5.1 GB | ||
| EGAF00005394217 | 1627378106946 | 723.7 MB | ||
| EGAF00005394218 | 1627378106946 | 7.5 GB | ||
| EGAF00005394219 | 1627378106946 | 3.8 GB | ||
| EGAF00005394220 | 1627378106946 | 508.8 MB | ||
| EGAF00005394221 | 1627378106946 | 5.2 GB | ||
| EGAF00005394222 | 1627378106946 | 5.2 GB | ||
| EGAF00005394223 | 1627378106946 | 589.8 MB | ||
| EGAF00005394224 | 1627378106946 | 5.9 GB | ||
| EGAF00005394225 | 1627378106946 | 5.8 GB | ||
| EGAF00005394226 | 1627378106946 | 332.6 MB | ||
| EGAF00005394227 | 1627378106946 | 3.2 GB | ||
| EGAF00005394228 | 1627378106946 | 3.3 GB | ||
| EGAF00005394229 | 1627378106946 | 312.3 MB | ||
| EGAF00005394230 | 1627378106946 | 3.0 GB | ||
| EGAF00005394231 | 1627378106946 | 3.1 GB | ||
| EGAF00005394232 | 1627378106946 | 388.3 MB | ||
| EGAF00005394233 | 1627378106946 | 3.6 GB | ||
| EGAF00005394234 | 1627378106946 | 3.9 GB | ||
| EGAF00005394235 | 1627378106946 | 632.8 MB | ||
| EGAF00005394236 | 1627378106946 | 6.1 GB | ||
| EGAF00005394237 | 1627378106946 | 6.5 GB | ||
| EGAF00005394238 | 1627378106946 | 374.6 MB | ||
| EGAF00005394239 | 1627378106946 | 3.5 GB | ||
| EGAF00005394240 | 1627378106946 | 3.7 GB | ||
| EGAF00005394241 | 1627378106946 | 377.1 MB | ||
| EGAF00005394242 | 1627378106946 | 3.6 GB | ||
| EGAF00005394243 | 1627378106946 | 3.7 GB | ||
| EGAF00005394244 | 1627378106946 | 337.1 MB | ||
| EGAF00005394245 | 1627378106946 | 3.3 GB | ||
| EGAF00005394246 | 1627378106946 | 3.3 GB | ||
| EGAF00005394247 | 1627378106946 | 470.1 MB | ||
| EGAF00005394248 | 1627378106946 | 4.9 GB | ||
| EGAF00005394249 | 1627378106946 | 5.0 GB | ||
| EGAF00005394250 | 1627378106946 | 1.5 GB | ||
| EGAF00005394251 | 1627378106946 | 13.7 GB | ||
| EGAF00005394252 | 1627378106946 | 13.2 GB | ||
| EGAF00005394253 | 1627378106946 | 1.2 GB | ||
| EGAF00005394254 | 1627378106946 | 10.5 GB | ||
| EGAF00005394255 | 1627378106946 | 9.7 GB | ||
| EGAF00005394256 | 1627378106946 | 987.6 MB | ||
| EGAF00005394257 | 1627378106946 | 909.3 MB | ||
| EGAF00005394258 | 1627378106946 | 7.7 GB | ||
| EGAF00005394259 | 1627378106946 | 8.0 GB | ||
| EGAF00005394260 | 1627378106946 | 10.5 GB | ||
| EGAF00005394261 | 1627378106946 | 492.6 MB | ||
| EGAF00005394262 | 1627378106946 | 5.1 GB | ||
| EGAF00005394263 | 1627378106946 | 5.0 GB | ||
| EGAF00005394264 | 1627378106946 | 5.2 GB | ||
| EGAF00005394265 | 1627378106946 | 5.0 GB | ||
| EGAF00005394266 | 1627378106946 | 3.9 GB | ||
| EGAF00005394267 | 1627378106946 | 500.3 MB | ||
| EGAF00005394268 | 1627378106946 | 4.9 GB | ||
| EGAF00005394269 | 1627378106946 | 385.3 MB | ||
| EGAF00005394270 | 1627378106946 | 4.0 GB | ||
| EGAF00005394271 | 1627378106946 | 3.9 GB | ||
| EGAF00005394272 | 1627378106946 | 391.1 MB | ||
| EGAF00005394273 | 1627378106946 | 3.8 GB | ||
| EGAF00005394274 | 1627378106946 | 5.0 GB | ||
| EGAF00005394275 | 1627378106946 | 7.6 GB | ||
| EGAF00005394276 | 1627378106946 | 375.4 MB | ||
| EGAF00005394277 | 1627378106946 | 3.9 GB | ||
| EGAF00005394278 | 1627378106946 | 426.7 MB | ||
| EGAF00005394279 | 1627378106946 | 4.5 GB | ||
| EGAF00005394280 | 1627378106946 | 4.4 GB | ||
| EGAF00005400375 | 1627431512918 | 2.6 MB | ||
| EGAF00005400376 | 1627431512918 | 2.8 MB | ||
| EGAF00005400378 | 1627431512918 | 3.1 MB | ||
| EGAF00005400379 | 1627431512917 | 3.0 MB | ||
| EGAF00005400380 | 1627431512917 | 3.3 MB | ||
| EGAF00005400381 | 1627431512917 | 3.3 MB | ||
| EGAF00005400382 | 1627431512917 | 3.0 MB | ||
| EGAF00005400383 | 1627431512917 | 3.1 MB | ||
| EGAF00005400384 | 1627431512917 | 3.3 MB | ||
| EGAF00005400385 | 1627431512917 | 3.3 MB | ||
| EGAF00005400386 | 1627431512917 | 3.0 MB | ||
| EGAF00005400387 | 1627431512917 | 2.8 MB | ||
| EGAF00005400388 | 1627431512917 | 2.6 MB | ||
| EGAF00005400389 | 1627431512917 | 2.8 MB | ||
| EGAF00005400390 | 1627431512917 | 3.1 MB | ||
| EGAF00005400391 | 1627431512917 | 3.0 MB | ||
| EGAF00005400392 | 1627431512917 | 3.3 MB | ||
| EGAF00005400393 | 1627431512917 | 3.3 MB | ||
| EGAF00005400394 | 1627431512917 | 3.0 MB | ||
| EGAF00005400395 | 1627431512917 | 2.8 MB | ||
| EGAF00005400396 | 1627431512918 | 3.3 MB | ||
| EGAF00005400397 | 1627431512918 | 3.3 MB | ||
| 122 Files (432.8 GB) | ||||