single cell RNA-seq of peripheral blood from analysis in infants with MLL-rearranged Acute Lymphoblastic Leukemia
This dataset contains two experiments. 1) Single cell RNA-seq of peripheral blood diagnostic samples from patients with MLL-rearranged infant ALL that underwent relapse or not (samples ending in R relapsed, samples ending in N did not), sequenced with SORT-seq (see cell systems, 2016, doi:10.1016/j.cels.2016.09.002). For some of the patients, multiple indipendent plates were produced (each plate is a sample). Barcode-well correspondence can be found here: https://bitbucket.org/princessmaximacenter/sharq/src/master/data/celseq2_bc384-v4.csv . 2) Single cell RNA-seq of peripheral blood diagnostic samples from patients with MLL-rearranged infant ALL that underwent relapse or not (samples ending in R relapsed, samples ending in N did not), sequenced with10x Genomics Version 2.
- 26 samples
- DAC: EGAC00001001864
- Technology: NextSeq 500
The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes.
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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001003986 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00005312734 | fq.gz | 369.7 MB | ||
| EGAF00005312735 | fq.gz | 798.2 MB | ||
| EGAF00005312746 | fq.gz | 2.5 GB | ||
| EGAF00005312747 | fq.gz | 2.8 GB | ||
| EGAF00005312748 | fq.gz | 647.8 MB | ||
| EGAF00005312749 | fq.gz | 2.5 GB | ||
| EGAF00005312750 | fq.gz | 586.9 MB | ||
| EGAF00005312751 | fq.gz | 2.2 GB | ||
| EGAF00005312752 | fq.gz | 430.0 MB | ||
| EGAF00005312753 | fq.gz | 1.7 GB | ||
| EGAF00005312754 | fq.gz | 543.1 MB | ||
| EGAF00005312755 | fq.gz | 2.1 GB | ||
| EGAF00005312756 | fq.gz | 537.9 MB | ||
| EGAF00005312757 | fq.gz | 2.0 GB | ||
| EGAF00005312758 | fq.gz | 801.5 MB | ||
| EGAF00005312759 | fq.gz | 3.1 GB | ||
| EGAF00005312760 | fq.gz | 619.9 MB | ||
| EGAF00005312761 | fq.gz | 2.3 GB | ||
| EGAF00005312762 | fq.gz | 1.1 GB | ||
| EGAF00005312763 | fq.gz | 4.5 GB | ||
| EGAF00005312764 | fq.gz | 535.1 MB | ||
| EGAF00005312765 | fq.gz | 2.1 GB | ||
| EGAF00005312776 | fq.gz | 505.5 MB | ||
| EGAF00005312777 | fq.gz | 1.9 GB | ||
| EGAF00005312778 | fq.gz | 489.1 MB | ||
| EGAF00005312779 | fq.gz | 1.8 GB | ||
| EGAF00005312780 | fq.gz | 600.0 MB | ||
| EGAF00005312781 | fq.gz | 2.2 GB | ||
| EGAF00005312782 | fq.gz | 463.8 MB | ||
| EGAF00005312783 | fq.gz | 1.7 GB | ||
| EGAF00005312784 | fq.gz | 446.6 MB | ||
| EGAF00005312785 | fq.gz | 1.1 GB | ||
| EGAF00005312786 | fq.gz | 468.4 MB | ||
| EGAF00005312787 | fq.gz | 495.3 MB | ||
| EGAF00005312788 | fq.gz | 1.4 GB | ||
| EGAF00005312789 | fq.gz | 1.5 GB | ||
| EGAF00005312790 | fq.gz | 620.8 MB | ||
| EGAF00005312791 | fq.gz | 766.7 MB | ||
| EGAF00005312792 | fq.gz | 414.7 MB | ||
| EGAF00005312793 | fq.gz | 1.1 GB | ||
| EGAF00005312814 | fq.gz | 3.9 GB | ||
| EGAF00005312815 | fq.gz | 11.0 GB | ||
| EGAF00005312816 | fq.gz | 3.3 GB | ||
| EGAF00005312817 | fq.gz | 9.1 GB | ||
| EGAF00005312818 | fq.gz | 3.2 GB | ||
| EGAF00005312819 | fq.gz | 9.2 GB | ||
| EGAF00005312820 | fq.gz | 4.0 GB | ||
| EGAF00005312821 | fq.gz | 11.3 GB | ||
| EGAF00005312822 | fq.gz | 2.7 GB | ||
| EGAF00005312823 | fq.gz | 7.7 GB | ||
| EGAF00005312824 | fq.gz | 2.5 GB | ||
| EGAF00005312825 | fq.gz | 7.0 GB | ||
| 52 Files (127.5 GB) | ||||