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Cohort of NGS lymphoma samples used as control

Control cohort of lymphoma samples sequenced with a hybrid capture panel designed to be able to detect translocations and mutations in lymphoma samples. used in the paper "Robust detection of translocations in lymphoma FFPE samples using Targeted Locus Capture-based sequencing"

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005304354 bam 335.9 MB
EGAF00005304355 1622020743666 2.0 GB
EGAF00005304356 1622020743666 2.3 GB
EGAF00005304357 1622020684335 1.3 GB
EGAF00005304358 1622020743666 2.8 GB
EGAF00005304359 1622020624313 637.7 MB
EGAF00005304360 1622020743666 2.1 GB
EGAF00005304361 1622020624313 691.7 MB
EGAF00005304362 1622020624313 816.0 MB
EGAF00005304363 1622020684335 1.1 GB
EGAF00005304364 1622020624313 760.3 MB
EGAF00005304365 bam 460.9 MB
EGAF00005304366 1622020684335 1.3 GB
EGAF00005304367 1622020624313 684.5 MB
EGAF00005304368 1622020684335 1.7 GB
EGAF00005304369 1622020803938 2.8 GB
EGAF00005304370 1622020743666 2.7 GB
EGAF00005304371 1622020624313 1.0 GB
EGAF00005304372 1622020624313 1.1 GB
EGAF00005304373 1622020684335 1.3 GB
20 Files (28.1 GB)