Need Help?

WGS data subfolder HFF7VCCXY from multifocal ileal NETs study

This dataset includes linked-read whole-genome sequencing data (subfolder HFF7VCCXY) for multifocal ileal tumor samples from one patient. Samples were sequenced using the 10x Genomics linked-read whole-genome sequencing (WGS) approach.

Request Access

Data Access Agreement for WGS data subfolder HFF7VCCXY generated in Multifocal ileal NETs study

DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the genotype data generated by the current study. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data from the 1958 British Birth Cohort or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording is provided in the Publications Policy given in Schedule 1. 9. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 10. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 11. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 12. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 13. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 14. You agree that you will submit a report to the Consortium Data Access Committee, if requested, on completion of the agreed purpose. The Consortium Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 15. You accept that the Data is protected by and subject to international laws, including but not limited to the UK Data Protection Act 1998, and that You are responsible for ensuring compliance with any such applicable law. The Consortium Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA. 16. This agreement shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the non-exclusive jurisdiction of the English courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004679225 fastq.gz 1.5 GB
EGAF00004679226 fastq.gz 1.6 GB
EGAF00004679227 fastq.gz 2.0 GB
EGAF00004679228 fastq.gz 2.1 GB
EGAF00004679229 fastq.gz 1.8 GB
EGAF00004679230 fastq.gz 1.9 GB
EGAF00004679231 fastq.gz 1.7 GB
EGAF00004679232 fastq.gz 1.9 GB
EGAF00004679233 fastq.gz 1.7 GB
EGAF00004679234 fastq.gz 1.9 GB
EGAF00004679235 fastq.gz 1.8 GB
EGAF00004679236 fastq.gz 2.0 GB
EGAF00004679237 fastq.gz 1.8 GB
EGAF00004679238 fastq.gz 1.9 GB
EGAF00004679239 fastq.gz 1.6 GB
EGAF00004679240 fastq.gz 1.7 GB
EGAF00005104742 1616966347468 149.3 MB
EGAF00005104743 1616967130681 156.7 MB
EGAF00005104744 1616964040066 128.5 MB
EGAF00005104745 1616981786908 1.7 GB
EGAF00005104746 1616982604182 1.9 GB
EGAF00005104747 1616966010693 144.7 MB
EGAF00005104748 1616966010693 139.5 MB
EGAF00005104749 1616967281678 157.6 MB
EGAF00005104750 1616982243720 1.9 GB
EGAF00005104751 1616984117552 2.0 GB
EGAF00005104752 1616982427962 1.8 GB
EGAF00005104753 1616982502984 1.9 GB
EGAF00005104754 1616963375568 121.8 MB
EGAF00005104755 1616963434994 122.6 MB
EGAF00005104756 1616982243720 1.9 GB
EGAF00005104757 1616982845878 2.1 GB
EGAF00005104758 1616966010693 139.9 MB
EGAF00005104759 1616965228365 139.1 MB
EGAF00005104760 1616965165859 138.7 MB
EGAF00005104761 1616983096889 1.8 GB
EGAF00005104762 1616982678921 1.9 GB
EGAF00005104763 1616982383132 1.8 GB
EGAF00005104764 1616982304291 2.0 GB
EGAF00005104765 1616982304291 1.6 GB
EGAF00005104766 1616982678921 1.7 GB
EGAF00005104767 1616968170575 166.3 MB
EGAF00005104768 1616982604182 1.8 GB
EGAF00005104769 1616984117552 2.0 GB
EGAF00005104770 1616968025870 164.9 MB
EGAF00005104771 1616982080581 1.8 GB
EGAF00005104772 1616983999530 2.0 GB
EGAF00005104773 1616981722888 1.6 GB
EGAF00005104774 1616982724902 1.7 GB
EGAF00005104775 1616963375568 121.8 MB
EGAF00005104776 1616982304291 1.9 GB
EGAF00005104777 1616982678921 2.0 GB
EGAF00005104778 1616967091047 155.7 MB
EGAF00005104779 1616964069127 128.6 MB
EGAF00005104780 1616967665659 161.6 MB
EGAF00005104781 1616982724902 1.7 GB
EGAF00005104782 1616982427962 1.9 GB
EGAF00005104783 1616982724902 1.7 GB
EGAF00005104784 1616982383132 1.9 GB
EGAF00005104785 1616966010693 140.4 MB
EGAF00005104786 1616966312491 148.6 MB
EGAF00005104787 1616964192605 129.5 MB
EGAF00005104788 1616966010693 139.3 MB
EGAF00005104789 1616968025870 165.1 MB
EGAF00005104790 1616966195281 148.2 MB
EGAF00005104791 1616965165859 138.6 MB
EGAF00005104792 1616967665659 161.8 MB
EGAF00005104793 1616968025870 165.2 MB
EGAF00005104794 1616983698209 2.0 GB
EGAF00005104795 1616983631088 2.2 GB
EGAF00005104796 1616963375568 121.8 MB
EGAF00005104797 1616984044000 2.0 GB
EGAF00005104798 1616982905662 2.2 GB
EGAF00005104799 1616983631088 1.8 GB
EGAF00005104800 1616982678921 2.0 GB
EGAF00005104801 1616982724902 1.7 GB
EGAF00005104802 1616982243720 1.8 GB
EGAF00005104803 1616982798974 1.7 GB
EGAF00005104804 1616982678922 1.9 GB
EGAF00005104805 1616982427962 1.8 GB
EGAF00005104806 1616982905662 2.0 GB
EGAF00005104807 1616981786908 1.7 GB
EGAF00005104808 1616983631088 1.8 GB
EGAF00005104809 1616965116586 138.4 MB
EGAF00005104810 1616982304291 1.9 GB
EGAF00005104811 1616983631088 2.0 GB
EGAF00005104812 1616964040066 128.3 MB
EGAF00005104813 1616965165859 139.1 MB
EGAF00005104814 1616967130681 156.6 MB
EGAF00005104815 1616982502984 2.0 GB
EGAF00005104816 1616983026179 2.2 GB
EGAF00005104817 1616967130681 156.5 MB
EGAF00005104818 1616967750393 162.0 MB
EGAF00005104819 1616966010692 145.4 MB
EGAF00005104820 1616967030265 155.4 MB
EGAF00005104821 1616966010692 144.3 MB
EGAF00005104822 1616966312491 148.5 MB
EGAF00005104823 1616982383132 1.8 GB
EGAF00005104824 1616982798974 2.0 GB
EGAF00005104825 1616966010692 144.4 MB
EGAF00005104826 1616983631088 2.0 GB
EGAF00005104827 1616983026179 2.2 GB
EGAF00005104828 1616966010690 140.2 MB
EGAF00005104829 1616981537713 1.5 GB
EGAF00005104830 1616981857301 1.6 GB
EGAF00005104831 1616982383132 1.5 GB
EGAF00005104832 1616981786908 1.6 GB
EGAF00005104833 1616982798974 2.0 GB
EGAF00005104834 1616984044000 2.2 GB
EGAF00005104835 1616983631088 2.0 GB
EGAF00005104836 1616983026179 2.2 GB
EGAF00005104837 1616981602820 1.5 GB
EGAF00005104838 1616981786908 1.6 GB
EGAF00005104839 1616983631088 2.0 GB
EGAF00005104840 1616983631088 2.2 GB
EGAF00005104841 1616966010692 141.4 MB
EGAF00005104842 1616966010692 140.2 MB
EGAF00005104843 1616967811845 162.8 MB
EGAF00005104844 1616982127641 1.7 GB
EGAF00005104845 1616982502984 1.9 GB
EGAF00005104846 1616982798974 1.7 GB
EGAF00005104847 1616983631088 1.8 GB
EGAF00005104848 1616981786908 1.6 GB
EGAF00005104849 1616982845878 1.7 GB
EGAF00005104850 1616981968874 1.7 GB
EGAF00005104851 1616983631088 1.8 GB
EGAF00005104852 1616967130681 156.5 MB
EGAF00005104853 1616981857301 1.7 GB
EGAF00005104854 1616982127641 1.9 GB
EGAF00005104855 1616983631088 1.8 GB
EGAF00005104856 1616982502984 2.0 GB
EGAF00005104857 1616967191159 156.6 MB
132 Files (169.6 GB)