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The clinicopathologic spectrum and genomic landscape of de-/trans-differentiated melanoma

De- and trans-differentiation is a rare and only poorly understood phenomenon in cutaneous melanoma. To study this disease more comprehensively we have retrieved 11 primary cutaneous melanomas from our pathology archives showing biphasic features characterized by a conventional melanoma and additional areas of de-/trans-differentiation as defined by a lack of immunohistochemical expression of all conventional melanocytic markers (S-100 protein, SOX10, Melan-A and HMB-45). The clinical, histologic and immunohistochemical findings were recorded and follow-up was obtained. The patients were mostly elderly (median: 81 years; range: 42-86 years) without significant gender predilection, and the sun-exposed skin of the head and neck area was most commonly affected. The tumors were deeply invasive with a mean tumor thickness of 7 mm (range: 4-80 mm). The dedifferentiated component showed atypical fibroxanthoma-like features in the majority (7), while additional rhabdomyosarcomatous and epithelial transdifferentiation was noted histologically and/or immunohistochemically in two tumors each. The background conventional melanoma component was of desmoplastic (4), superficial spreading (3), nodular (2), lentigo maligna (1) or spindle cell (1) types. For the 7 patients with available follow-up data (median follow-up period of 25 months; range: 8-36 months), 2 died from their disease and 3 developed metastases. Next-generation sequencing of the cohort revealed somatic mutation of established melanoma drivers including mainly NF1 mutations in the conventional component (5 cases), which were also detected in the corresponding de-/trans-differentiated components. In summary, the diagnosis of de-/trans-differentiated melanoma is challenging and depends on the morphologic identification of the conventional melanoma component. Molecular analysis is diagnostically helpful as the mutated gene profile is shared between the conventional and de-/trans-differentiated components. Importantly, de-/trans-differentiation does not appear to confer a more aggressive behavior.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005094212 1615626353016 6.8 GB
EGAF00005094213 1615601517425 3.7 GB
EGAF00005094214 1615591148426 2.6 GB
EGAF00005094215 1615544679684 1.2 GB
EGAF00005094216 1615592485856 2.5 GB
EGAF00005094217 1615540829235 143.5 MB
EGAF00005094218 1615586896073 1.8 GB
EGAF00005094219 1615541896459 563.7 MB
EGAF00005094220 1615623052216 6.7 GB
EGAF00005094221 1615619684744 5.4 GB
EGAF00005094222 1615540864162 565.2 MB
EGAF00005094223 1615586896073 2.0 GB
EGAF00005094224 1615602063335 4.1 GB
EGAF00005094225 1615601438342 4.1 GB
EGAF00005094226 1615599745564 3.5 GB
EGAF00005094227 1615587306512 2.1 GB
EGAF00005094228 1615605976289 4.3 GB
EGAF00005094229 1615540756719 7.5 kB
18 Files (52.0 GB)