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Single-cell RNA sequencing data of peripheral blood mononuclear cells obtained from 30 ATL patients, 11 HTLV-1-infected asymptomatic carriers, and 4 healthy donors.

Single-cell RNA sequencing (scRNA-seq) data of peripheral blood mononuclear cells (PBMCs) obtained from 30 ATL patients (34 samples including 4 sequential ones), 11 HTLV-1-infected asymptomatic carriers, and 4 healthy donors.

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Division of Molecular Oncology National Cancer Center Research Institute Data Access Committee DATA ACCESS AGREEMENT

Division of Molecular Oncology National Cancer Center Research Institute Data Access Committee DATA ACCESS AGREEMENT This Data Access Agreement (“Agreement”) governs the terms on which access will be granted to the sequence data generated by the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee. In signing this Agreement, the User agrees to be bound by the terms and conditions of access set out in this Agreement. For the sake of clarity, the terms of access set out in this Agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the Agreement as “You” and “Your” shall be construed accordingly. Definitions: Project team means Division of Molecular Oncology, National Cancer Center Research Institute, Tokyo, Japan. Data means all sequence data set of cancer cell lines, obtained from the Project team. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. i Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research. 2. You agree not to use the Data or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the Data provided under this Agreement to other information or archive Data available for the data sets provided, even if access to that Data has been formally granted to You, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the Data for the approved purpose and project described in Your application; use of the Data for a new purpose or project will require a new application and approval. 7. A Data access account using a non-institutional email address is established if You agree to notify EGA and the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee within 30 days of any changes of, or departures from the institution specified in Your application. 8. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 9. You agree to abide by the terms outlined in the Project team 'Publications Policy' as set out in Schedule 1. 10. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the Data, and the role of the Project team. Suitable wording is provided in the Publications Policy given in Schedule 1. 11. You accept that the Project team, the original Data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 12. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 13. You recognise that nothing in this Agreement shall operate to transfer to You any intellectual property rights relating to the Data. You have the right to develop intellectual property based on comparisons with Your own data. 14. You agree not to make intellectual property claims on the Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of the Data, or conclusion drawn directly from the Data. 15. You can elect to perform further research that would add intellectual and resource capital to the Data and decide to obtain intellectual property rights on these downstream discoveries. In this case, You agree to implement licensing policies that will not obstruct further research, and follow the U.S. National Institutes of Health’s, Best Practices for the Licensing of Genomic Inventions or a similar national guideline that is in conformity with the OECD, Guidelines for the Licensing of the Genetic Inventions. 16. You agree to notify the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee in writing of any new intellectual property. You agree to, on request, provide a non-exclusive, royalty-free licence to the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee for their own research and educational uses. 17. You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. 18. You accept that it may be necessary for the Project team or its appointed agent to alter the terms of this Agreement from time to time in order to address new concerns. In this event, the Project team or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 19. Access to the Data is granted for a period of 2 years. Where it is necessary to extend the period of access, You agree to contact the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee, in advance of the expiry of the period of access. At the end of the period of access, You agree to destroy all copies of the Data, except as required by publication practices or law to retain them. 20. You agree that You will submit a report to the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee, if requested, on completion of the agreed purpose. The Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to You. 21. You accept that the Data is protected by and subject to international laws and that You are responsible for ensuring compliance with any such applicable law. The Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in Japan. 22. This Agreement shall be governed by, and construed and interpreted under the laws of Japan. All dispute pertaining to this Agreement shall be subject to the exclusive jurisdiction of the Tokyo District Court of Japan for the first instance.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005068216 1615361824228 22.4 GB
EGAF00005068217 1615367947951 23.1 GB
EGAF00005068336 1615332213038 12.8 GB
EGAF00005068337 1615357334707 13.4 GB
EGAF00005068338 1615333515667 12.7 GB
EGAF00005068339 1615345982625 13.3 GB
EGAF00005068340 1615338670028 25.1 GB
EGAF00005068341 1615364886122 25.9 GB
EGAF00005068342 1615337115450 23.6 GB
EGAF00005068343 1615342984811 24.2 GB
EGAF00005068344 1615339868294 14.2 GB
EGAF00005068345 1615350244562 14.9 GB
EGAF00005068346 1615338670028 25.5 GB
EGAF00005068347 1615703261249 26.5 GB
EGAF00005068348 1615362062618 15.6 GB
EGAF00005068349 1615345746160 16.3 GB
EGAF00005068350 1615703261249 27.3 GB
EGAF00005068351 1615340402946 28.3 GB
EGAF00005068352 1615346826043 32.7 GB
EGAF00005068353 1615706182104 33.7 GB
EGAF00005068354 1615337828081 16.7 GB
EGAF00005068355 1615353609970 17.4 GB
EGAF00005068595 1615679719097 26.2 GB
EGAF00005068596 1615686440165 26.9 GB
EGAF00005068597 1615384323811 24.9 GB
EGAF00005068598 1615679719097 25.6 GB
EGAF00005068599 1615692775860 25.6 GB
EGAF00005068600 1615681197910 26.2 GB
EGAF00005068601 1615367176886 25.3 GB
EGAF00005068602 1615681197910 25.9 GB
EGAF00005068603 1615396332022 20.9 GB
EGAF00005068604 1615342865248 21.6 GB
EGAF00005068605 1615385707355 19.2 GB
EGAF00005068606 1615364645955 20.1 GB
EGAF00005068607 1615365003130 20.5 GB
EGAF00005068608 1615372742860 21.3 GB
EGAF00005068609 1615690093783 25.5 GB
EGAF00005068610 1615681197910 26.2 GB
EGAF00005068611 1615683146141 26.6 GB
EGAF00005068612 1615685621963 27.4 GB
EGAF00005068613 1615370763142 25.2 GB
EGAF00005068614 1615694048850 26.3 GB
EGAF00005068615 1615677677903 25.4 GB
EGAF00005068616 1615688775440 26.2 GB
EGAF00005068617 1615694944370 28.2 GB
EGAF00005068618 1615700472683 29.1 GB
EGAF00005068619 1615681457749 26.3 GB
EGAF00005068620 1615685430367 27.4 GB
EGAF00005068621 1615361582380 22.5 GB
EGAF00005068622 1615412163899 25.2 GB
EGAF00005068623 1615692775860 25.8 GB
EGAF00005068624 1615693211949 27.0 GB
EGAF00005068625 1615356969382 19.8 GB
EGAF00005068626 1615394348032 20.5 GB
EGAF00005068627 1615682356540 26.6 GB
EGAF00005068628 1615687121964 28.0 GB
EGAF00005068629 1615677615949 25.6 GB
EGAF00005068630 1615684664145 26.6 GB
EGAF00005068631 1615403444358 24.4 GB
EGAF00005068632 1615685621963 25.7 GB
EGAF00005068633 1615372026985 21.1 GB
EGAF00005068634 1615370286986 21.8 GB
EGAF00005068635 1615719186826 36.2 GB
EGAF00005068636 1615773616216 37.3 GB
EGAF00005068637 1615683212943 26.8 GB
EGAF00005068638 1615688775440 28.8 GB
EGAF00005068639 1615362122149 14.6 GB
EGAF00005068640 1615358111942 15.2 GB
EGAF00005068641 1615366262555 17.7 GB
EGAF00005068642 1615393214885 18.8 GB
EGAF00005068643 1615362962001 21.6 GB
EGAF00005068644 1615361764274 22.9 GB
EGAF00005068645 1615722667495 31.2 GB
EGAF00005068646 1615703261248 31.9 GB
EGAF00005068647 1615696387404 28.9 GB
EGAF00005068648 1615692775860 30.4 GB
EGAF00005068649 1615773616216 38.4 GB
EGAF00005068650 1615773616216 39.4 GB
EGAF00005068651 1615690225501 29.5 GB
EGAF00005068652 1615692775861 30.4 GB
EGAF00005068653 1615690225501 29.5 GB
EGAF00005068654 1615692775861 30.4 GB
EGAF00005068655 1615366262555 18.0 GB
EGAF00005068656 1615385643255 18.7 GB
EGAF00005068657 1615693699424 28.1 GB
EGAF00005068658 1615706182104 29.0 GB
EGAF00005068659 1615364525503 20.0 GB
EGAF00005068660 1615396332022 20.6 GB
EGAF00005068661 1615374903226 15.4 GB
EGAF00005068662 1615365549811 16.5 GB
EGAF00005069245 1625065756216 23.3 GB
EGAF00005069246 1615367524970 24.1 GB
EGAF00005069247 1615690282109 27.0 GB
EGAF00005069248 1625059544685 27.9 GB
EGAF00005069249 1625114285110 26.7 GB
EGAF00005069250 1615685918905 27.6 GB
EGAF00005069251 1625114518213 28.4 GB
EGAF00005069252 1625069869618 29.5 GB
98 Files (2.4 TB)