RNA and ChIP Sequencing datasets from the study Kalirin-RAC controls nucleokinetic migration in ADRN-type neuroblastoma
This dataset contains the RNA and ChIP Sequencing data from the study Kalirin-RAC controls nucleokinetic migration in ADRN-type neuroblastoma. The data is organized in 7 experiments which are divided by both sequencing technology or the application of siRNA or drug interventions (or lack thereof) on neuroblastoma cell lines. The experiment names and the file names have been chosen in each respective experiment to guide future users of the data to replicate the analyses in the manuscript.
- 54 samples
- DAC: EGAC00001001965
- Technology: Illumina HiSeq 2000
Transfer of patient-derived cell line sequencing data requires a data transfer agreement to ensure that the regulations of the data protection law are fulfilled.
"I undertake to use the sequencial data exclusively for academic research purposes, like stated in the patient informed consent. The research activities comprise examinations of molecular, genetic, immunologic and other characteristics of the tumor disease, as well as the development of new therapeutic options or diagnostic methods where appropriate. I received professional legal advice or a positive vote by the ethic committee, respectively. All applicable data protection laws are respected. Genetic data will be encoded and stored separately from clinical data. I ensure that these data at our institution are protected against access by any third parties. The data will not be passed on to unauthorized third parties. Equally, the codes necessary for re-identification will not be passed on to unauthorized third parties. No attempt is made to identify the respective patient via their genetic data. Future publications will not allow any conclusion regarding the person’s identity."
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004982449 | fastq.gz | 2.7 GB | ||
| EGAF00004982450 | fastq.gz | 2.8 GB | ||
| EGAF00004982451 | fastq.gz | 1.6 GB | ||
| EGAF00004982452 | fastq.gz | 1.6 GB | ||
| EGAF00004982453 | fastq.gz | 1.6 GB | ||
| EGAF00004982454 | fastq.gz | 1.6 GB | ||
| EGAF00004982455 | fastq.gz | 2.0 GB | ||
| EGAF00004982456 | fastq.gz | 2.1 GB | ||
| EGAF00004982457 | fastq.gz | 1.5 GB | ||
| EGAF00004982458 | fastq.gz | 1.5 GB | ||
| EGAF00004982459 | fastq.gz | 2.8 GB | ||
| EGAF00004982460 | fastq.gz | 2.9 GB | ||
| EGAF00004982461 | fastq.gz | 1.5 GB | ||
| EGAF00004982462 | fastq.gz | 1.6 GB | ||
| EGAF00004982463 | fastq.gz | 1.5 GB | ||
| EGAF00004982464 | fastq.gz | 1.6 GB | ||
| EGAF00004982465 | fastq.gz | 1.5 GB | ||
| EGAF00004982466 | fastq.gz | 1.6 GB | ||
| EGAF00004982467 | fastq.gz | 1.5 GB | ||
| EGAF00004982468 | fastq.gz | 1.6 GB | ||
| EGAF00004982469 | fastq.gz | 3.1 GB | ||
| EGAF00004982470 | fastq.gz | 3.2 GB | ||
| EGAF00004982471 | fastq.gz | 1.6 GB | ||
| EGAF00004982472 | fastq.gz | 1.7 GB | ||
| EGAF00004982473 | fastq.gz | 1.6 GB | ||
| EGAF00004982474 | fastq.gz | 1.7 GB | ||
| EGAF00004982475 | fastq.gz | 2.8 GB | ||
| EGAF00004982476 | fastq.gz | 2.9 GB | ||
| EGAF00004982477 | fastq.gz | 2.1 GB | ||
| EGAF00004982478 | fastq.gz | 2.3 GB | ||
| EGAF00004982479 | fastq.gz | 2.6 GB | ||
| EGAF00004982480 | fastq.gz | 2.8 GB | ||
| EGAF00004982481 | fastq.gz | 2.4 GB | ||
| EGAF00004982482 | fastq.gz | 2.5 GB | ||
| EGAF00004982483 | fastq.gz | 2.0 GB | ||
| EGAF00004982484 | fastq.gz | 2.1 GB | ||
| EGAF00004982485 | fastq.gz | 1.4 GB | ||
| EGAF00004982486 | fastq.gz | 1.5 GB | ||
| EGAF00004982487 | fastq.gz | 1.4 GB | ||
| EGAF00004982488 | fastq.gz | 1.5 GB | ||
| EGAF00004982489 | fastq.gz | 1.9 GB | ||
| EGAF00004982490 | fastq.gz | 2.0 GB | ||
| EGAF00004982491 | fastq.gz | 3.0 GB | ||
| EGAF00004982492 | fastq.gz | 3.2 GB | ||
| EGAF00004982493 | fastq.gz | 1.3 GB | ||
| EGAF00004982494 | fastq.gz | 1.4 GB | ||
| EGAF00004982495 | fastq.gz | 1.3 GB | ||
| EGAF00004982496 | fastq.gz | 1.4 GB | ||
| EGAF00004982497 | fastq.gz | 1.3 GB | ||
| EGAF00004982498 | fastq.gz | 1.4 GB | ||
| EGAF00004982499 | fastq.gz | 2.6 GB | ||
| EGAF00004982500 | fastq.gz | 2.7 GB | ||
| EGAF00004982501 | fastq.gz | 3.1 GB | ||
| EGAF00004982502 | fastq.gz | 3.3 GB | ||
| EGAF00004982503 | fastq.gz | 1.5 GB | ||
| EGAF00004982504 | fastq.gz | 1.6 GB | ||
| EGAF00004982505 | fastq.gz | 2.7 GB | ||
| EGAF00004982506 | fastq.gz | 2.8 GB | ||
| EGAF00004982507 | fastq.gz | 712.9 MB | ||
| EGAF00004982508 | fastq.gz | 1.0 GB | ||
| EGAF00004982509 | fastq.gz | 546.6 MB | ||
| EGAF00004982510 | fastq.gz | 1.1 GB | ||
| EGAF00004982511 | fastq.gz | 960.4 MB | ||
| EGAF00004982512 | fastq.gz | 894.7 MB | ||
| EGAF00004982513 | fastq.gz | 897.5 MB | ||
| EGAF00004982514 | fastq.gz | 952.5 MB | ||
| EGAF00004982515 | fastq.gz | 974.6 MB | ||
| EGAF00004982516 | fastq.gz | 1.1 GB | ||
| EGAF00004982517 | fastq.gz | 1.0 GB | ||
| EGAF00004982518 | fastq.gz | 941.6 MB | ||
| EGAF00004982519 | fastq.gz | 1.2 GB | ||
| EGAF00004982520 | fastq.gz | 1.1 GB | ||
| EGAF00004982521 | fastq.gz | 973.9 MB | ||
| EGAF00004982522 | fastq.gz | 573.6 MB | ||
| EGAF00004982523 | fastq.gz | 1.1 GB | ||
| EGAF00004982524 | fastq.gz | 1.1 GB | ||
| EGAF00004982525 | fastq.gz | 559.2 MB | ||
| EGAF00004982526 | fastq.gz | 564.9 MB | ||
| EGAF00004982527 | fastq.gz | 1.0 GB | ||
| EGAF00004982528 | fastq.gz | 1.0 GB | ||
| EGAF00004982529 | fastq.gz | 1.1 GB | ||
| EGAF00004982530 | fastq.gz | 984.2 MB | ||
| EGAF00004982531 | fastq.gz | 984.1 MB | ||
| EGAF00004982532 | fastq.gz | 1.1 GB | ||
| EGAF00004982533 | fastq.gz | 1.1 GB | ||
| EGAF00004982534 | fastq.gz | 1.1 GB | ||
| EGAF00004982535 | fastq.gz | 1.2 GB | ||
| EGAF00004982536 | fastq.gz | 807.4 MB | ||
| EGAF00004982537 | fastq.gz | 802.3 MB | ||
| EGAF00004982538 | fastq.gz | 972.9 MB | ||
| EGAF00004982539 | fastq.gz | 973.1 MB | ||
| EGAF00004982540 | fastq.gz | 5.2 GB | ||
| EGAF00004982541 | fastq.gz | 5.2 GB | ||
| EGAF00004982542 | fastq.gz | 5.2 GB | ||
| EGAF00004982543 | fastq.gz | 5.4 GB | ||
| EGAF00004982544 | fastq.gz | 1.2 GB | ||
| EGAF00004982545 | fastq.gz | 1.2 GB | ||
| EGAF00004982546 | fastq.gz | 5.0 GB | ||
| EGAF00004982547 | fastq.gz | 5.0 GB | ||
| EGAF00004982548 | fastq.gz | 5.7 GB | ||
| EGAF00004982549 | fastq.gz | 5.7 GB | ||
| EGAF00004982550 | fastq.gz | 5.1 GB | ||
| EGAF00004982551 | fastq.gz | 5.1 GB | ||
| EGAF00004982552 | fastq.gz | 3.3 GB | ||
| EGAF00004982553 | fastq.gz | 3.1 GB | ||
| EGAF00004982554 | fastq.gz | 2.4 GB | ||
| EGAF00004982555 | fastq.gz | 2.4 GB | ||
| EGAF00004982556 | fastq.gz | 3.3 GB | ||
| EGAF00004982557 | fastq.gz | 3.2 GB | ||
| EGAF00004982558 | fastq.gz | 4.0 GB | ||
| EGAF00004982559 | fastq.gz | 4.0 GB | ||
| EGAF00004982560 | fastq.gz | 7.2 GB | ||
| EGAF00004982561 | fastq.gz | 7.4 GB | ||
| EGAF00004982562 | fastq.gz | 2.7 GB | ||
| EGAF00004982563 | fastq.gz | 2.8 GB | ||
| EGAF00004982564 | fastq.gz | 3.4 GB | ||
| EGAF00004982565 | fastq.gz | 3.5 GB | ||
| EGAF00004982566 | fastq.gz | 4.7 GB | ||
| EGAF00004982567 | fastq.gz | 4.8 GB | ||
| EGAF00004982568 | fastq.gz | 3.9 GB | ||
| EGAF00004982569 | fastq.gz | 4.0 GB | ||
| EGAF00004982570 | fastq.gz | 2.7 GB | ||
| EGAF00004982571 | fastq.gz | 2.8 GB | ||
| EGAF00004982572 | fastq.gz | 3.8 GB | ||
| EGAF00004982573 | fastq.gz | 3.9 GB | ||
| EGAF00004982574 | fastq.gz | 4.2 GB | ||
| EGAF00004982575 | fastq.gz | 4.4 GB | ||
| EGAF00004982576 | fastq.gz | 4.1 MB | ||
| EGAF00004982577 | fastq.gz | 3.9 MB | ||
| EGAF00004982578 | fastq.gz | 3.9 GB | ||
| EGAF00004982579 | fastq.gz | 4.0 GB | ||
| EGAF00004982580 | fastq.gz | 4.0 GB | ||
| EGAF00004982581 | fastq.gz | 4.3 GB | ||
| EGAF00004982582 | fastq.gz | 2.7 MB | ||
| EGAF00004982583 | fastq.gz | 2.6 MB | ||
| EGAF00004982584 | fastq.gz | 3.9 GB | ||
| EGAF00004982585 | fastq.gz | 4.1 GB | ||
| EGAF00004982586 | fastq.gz | 3.8 GB | ||
| EGAF00004982587 | fastq.gz | 3.9 GB | ||
| EGAF00004982588 | fastq.gz | 4.2 GB | ||
| EGAF00004982589 | fastq.gz | 4.4 GB | ||
| EGAF00004982590 | fastq.gz | 6.3 GB | ||
| EGAF00004982591 | fastq.gz | 6.6 GB | ||
| EGAF00004982592 | fastq.gz | 3.9 GB | ||
| EGAF00004982593 | fastq.gz | 3.9 GB | ||
| EGAF00004982594 | fastq.gz | 3.1 GB | ||
| EGAF00004982595 | fastq.gz | 3.3 GB | ||
| EGAF00004982596 | fastq.gz | 4.7 GB | ||
| EGAF00004982597 | fastq.gz | 5.0 GB | ||
| EGAF00004982598 | fastq.gz | 3.0 GB | ||
| EGAF00004982599 | fastq.gz | 3.1 GB | ||
| EGAF00004982600 | fastq.gz | 3.8 MB | ||
| EGAF00004982601 | fastq.gz | 4.0 MB | ||
| 153 Files (380.6 GB) | ||||