Sequencing data for oesophageal and related samples - Nowicki-Osuch, Zhuang et al (WGS)
Data supporting: “Deep molecular phenotyping reveals the identity of Barrett’s esophagus and its malignant transition.” Nowicki-Osuch, Zhuang et al. WGS (BAM files) 5 Barrett's samples 5 normal oesophageal samples 5 normal gastric cardia samples 5 normal duodenal samples
- 10 samples
- DAC: EGAC00001000010
- Technologies: Illumina HiSeq 2000, Illumina NovaSeq 6000
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000723 | Other | |
| EGAS00001000726 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001415399 | bam | 57.9 GB | ||
| EGAF00001415401 | bam | 66.2 GB | ||
| EGAF00001415426 | bam | 136.6 GB | ||
| EGAF00001415428 | bam | 126.9 GB | ||
| EGAF00001680677 | bam | 74.8 GB | ||
| EGAF00001680750 | bam | 152.1 GB | ||
| EGAF00002549987 | bam | 130.7 GB | ||
| EGAF00002550009 | bam | 128.5 GB | ||
| EGAF00002550033 | bam | 64.6 GB | ||
| EGAF00002550056 | bam | 66.4 GB | ||
| EGAF00004972399 | bam | 77.1 GB | ||
| EGAF00004972400 | bam | 75.0 GB | ||
| EGAF00004972401 | bam | 67.9 GB | ||
| EGAF00004972402 | bam | 75.6 GB | ||
| EGAF00004972403 | bam | 73.2 GB | ||
| EGAF00004972404 | bam | 76.4 GB | ||
| EGAF00004972405 | bam | 71.9 GB | ||
| EGAF00004972406 | bam | 77.8 GB | ||
| EGAF00004972407 | bam | 70.7 GB | ||
| EGAF00004972408 | bam | 79.8 GB | ||
| 20 Files (1.8 TB) | ||||