Single-cell RNA-seq data of bronchoalveolar lavage (BAL) fluid in severe COVID-19 and SARS-CoV-2 stimulated classical blood monocytes
We performed single-cell RNA-sequencing of cells in the bronchoalveolar lavage (BAL) fluid of severe COVID-19. In addition, we performed single-cell RNA-sequencing of SARS-CoV-2 stimulated classical blood monocytes. This study provides detailed insights into the alveolar macrophage response to SARS-CoV-2 infection and reveals a profibrotic macrophage response in severe COVID-19 patients.
- 10 samples
- DAC: EGAC00001001884
- Technology: Illumina NovaSeq 6000
Data access policy for single-cell RNA-seq data of bronchoalveolar lavage (BAL) fluid in severe COVID-19 and SARS-CoV-2 stimulated classical blood monocytes.
Access to data generated is made available by completing the data access agreement for review by the data access committee and will be granted exclusively to qualified investigators for appropriate use.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004962667 | fastq.gz | 47.8 GB | ||
| EGAF00004962668 | fastq.gz | 108.6 GB | ||
| EGAF00004962669 | fastq.gz | 10.9 GB | ||
| EGAF00004962670 | fastq.gz | 25.3 GB | ||
| EGAF00004962671 | fastq.gz | 11.6 GB | ||
| EGAF00004962672 | fastq.gz | 26.9 GB | ||
| EGAF00004962673 | fastq.gz | 10.6 GB | ||
| EGAF00004962674 | fastq.gz | 24.6 GB | ||
| EGAF00004962675 | fastq.gz | 8.5 GB | ||
| EGAF00004962676 | fastq.gz | 20.1 GB | ||
| EGAF00004962677 | fastq.gz | 6.6 GB | ||
| EGAF00004962678 | fastq.gz | 15.4 GB | ||
| EGAF00004962679 | fastq.gz | 10.2 GB | ||
| EGAF00004962680 | fastq.gz | 24.4 GB | ||
| EGAF00004962681 | fastq.gz | 9.1 GB | ||
| EGAF00004962682 | fastq.gz | 15.8 GB | ||
| EGAF00004962683 | fastq.gz | 5.2 GB | ||
| EGAF00004962684 | fastq.gz | 8.8 GB | ||
| EGAF00004962685 | fastq.gz | 38.1 GB | ||
| EGAF00004962686 | fastq.gz | 89.2 GB | ||
| EGAF00004962687 | csv | 3.0 kB | ||
| 21 Files (518.0 GB) | ||||