Whole genome sequencing of HSPC clones, bulk MSC cultures, and bulk sorted tumor samples
Whole genome sequencing data (Illumina NovaSeq 6000) of clonal cultures derived from pediatric human bone marrow-derived hematopoietic stem and progenitor cells (in total 35 samples from 7 donors), bulk pediatric acute myeloid/lymphoid leukemia blasts (in total 2 samples from 1 patient) and bulk control mesenchymal stem cell cultures (4 samples from 4 patients) to study the mutation accumulation.
- 81 samples
- DAC: EGAC00001001864
- Technology: Illumina NovaSeq 6000
The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes.
Please contact the DAC for the most up to date policies.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004958912 | bam | 44.3 GB | ||
| EGAF00004958913 | bam | 30.7 GB | ||
| EGAF00004958914 | bam | 36.6 GB | ||
| EGAF00004958915 | bam | 36.8 GB | ||
| EGAF00004958916 | bam | 44.2 GB | ||
| EGAF00004958917 | bam | 39.6 GB | ||
| EGAF00004958918 | bam | 38.6 GB | ||
| EGAF00004958919 | bam | 20.7 GB | ||
| EGAF00004958920 | bam | 19.6 GB | ||
| EGAF00004958921 | bam | 23.0 GB | ||
| EGAF00004958922 | bam | 48.3 GB | ||
| EGAF00004958923 | bam | 47.9 GB | ||
| EGAF00004958924 | bam | 92.2 GB | ||
| EGAF00004958925 | bam | 17.3 GB | ||
| EGAF00004958926 | bam | 19.6 GB | ||
| EGAF00004958927 | bam | 17.9 GB | ||
| EGAF00004958928 | bam | 19.3 GB | ||
| EGAF00004958929 | bam | 21.3 GB | ||
| EGAF00004958930 | bam | 37.8 GB | ||
| EGAF00004958931 | bam | 40.2 GB | ||
| EGAF00004958932 | bam | 41.8 GB | ||
| EGAF00004958933 | bam | 40.6 GB | ||
| EGAF00004958934 | bam | 42.0 GB | ||
| EGAF00004958935 | bam | 41.1 GB | ||
| EGAF00004958936 | bam | 40.2 GB | ||
| EGAF00004958937 | bam | 43.4 GB | ||
| EGAF00004958938 | bam | 44.0 GB | ||
| EGAF00004958939 | bam | 37.8 GB | ||
| EGAF00004958940 | bam | 36.1 GB | ||
| EGAF00004958941 | bam | 41.1 GB | ||
| EGAF00004958942 | bam | 33.6 GB | ||
| EGAF00004958943 | bam | 62.9 GB | ||
| EGAF00004958944 | bam | 20.3 GB | ||
| EGAF00004958945 | bam | 39.7 GB | ||
| EGAF00004958946 | bam | 49.6 GB | ||
| EGAF00004958947 | bam | 40.7 GB | ||
| EGAF00004958948 | bam | 37.8 GB | ||
| EGAF00004958949 | bam | 39.7 GB | ||
| EGAF00004958950 | bam | 39.9 GB | ||
| EGAF00004958951 | bam | 21.7 GB | ||
| EGAF00004958952 | bam | 22.5 GB | ||
| EGAF00005333304 | bam | 52.1 GB | ||
| EGAF00005333305 | 1625152096458 | 19.8 GB | ||
| EGAF00005333306 | bam | 47.3 GB | ||
| EGAF00005333307 | bam | 28.7 GB | ||
| EGAF00005333308 | bam | 27.8 GB | ||
| EGAF00005333309 | 1625152574391 | 26.2 GB | ||
| EGAF00005333310 | bam | 27.5 GB | ||
| EGAF00005333311 | 1634013570808 | 25.9 GB | ||
| EGAF00005333312 | bam | 28.0 GB | ||
| EGAF00005333313 | bam | 31.4 GB | ||
| EGAF00005333314 | 1625152218152 | 26.0 GB | ||
| EGAF00005333315 | bam | 31.0 GB | ||
| EGAF00005333316 | bam | 43.8 GB | ||
| EGAF00005333317 | bam | 29.5 GB | ||
| EGAF00005333318 | bam | 27.1 GB | ||
| EGAF00005333319 | 1634013673652 | 27.7 GB | ||
| EGAF00005333320 | 1625153774253 | 23.5 GB | ||
| EGAF00005333321 | 1625152701980 | 26.0 GB | ||
| EGAF00005333322 | bam | 27.8 GB | ||
| EGAF00005333323 | 1625152701980 | 23.2 GB | ||
| EGAF00005333324 | bam | 27.0 GB | ||
| EGAF00005333325 | bam | 27.4 GB | ||
| EGAF00005333326 | bam | 27.9 GB | ||
| EGAF00005333327 | 1625151126531 | 26.7 GB | ||
| EGAF00005333328 | 1625151492792 | 26.9 GB | ||
| EGAF00005333329 | bam | 27.0 GB | ||
| EGAF00005333330 | 1634100000047 | 21.6 GB | ||
| EGAF00005333331 | bam | 47.8 GB | ||
| EGAF00005333332 | bam | 39.8 GB | ||
| EGAF00005333333 | 1634013912707 | 24.2 GB | ||
| EGAF00005333334 | 1625152574391 | 24.9 GB | ||
| EGAF00005333335 | 1634013852656 | 28.5 GB | ||
| EGAF00005333336 | bam | 27.1 GB | ||
| EGAF00005333337 | 1625153774253 | 26.1 GB | ||
| EGAF00005333338 | 1625154259430 | 24.6 GB | ||
| EGAF00005333339 | bam | 28.8 GB | ||
| EGAF00005333340 | 1634013673652 | 24.6 GB | ||
| EGAF00005333341 | bam | 29.3 GB | ||
| EGAF00005333342 | bam | 27.3 GB | ||
| EGAF00005333343 | 1625154137141 | 25.5 GB | ||
| 81 Files (2.7 TB) | ||||