Whole exome DNA sequencing data of pretreatment tumor biopsies and matched blood samples of patients treated in the OpACIN-neo trial
The dataset includes whole exome DNA sequencing on pre-treatment tumor biopsies of lymph node metastases (n=60) matched with blood samples (n=60)
- 120 samples
- DAC: EGAC00001001802
- Technology: Illumina NovaSeq 6000
The Institutional Review Board of the Netherlands Cancer Institute (NKI IRB)
Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004832 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004890233 | fastq.gz | 4.6 GB | ||
| EGAF00004890234 | fastq.gz | 4.6 GB | ||
| EGAF00004890235 | fastq.gz | 3.4 GB | ||
| EGAF00004890236 | fastq.gz | 3.5 GB | ||
| EGAF00004890239 | fastq.gz | 3.9 GB | ||
| EGAF00004890240 | fastq.gz | 3.9 GB | ||
| EGAF00004890241 | fastq.gz | 3.6 GB | ||
| EGAF00004890242 | fastq.gz | 3.8 GB | ||
| EGAF00004890243 | fastq.gz | 3.1 GB | ||
| EGAF00004890244 | fastq.gz | 3.3 GB | ||
| EGAF00004890245 | fastq.gz | 4.7 GB | ||
| EGAF00004890246 | fastq.gz | 4.7 GB | ||
| EGAF00004890247 | fastq.gz | 4.4 GB | ||
| EGAF00004890248 | fastq.gz | 4.5 GB | ||
| EGAF00004890249 | fastq.gz | 4.1 GB | ||
| EGAF00004890250 | fastq.gz | 4.3 GB | ||
| EGAF00004890251 | fastq.gz | 4.2 GB | ||
| EGAF00004890252 | fastq.gz | 4.3 GB | ||
| EGAF00004890253 | fastq.gz | 4.0 GB | ||
| EGAF00004890254 | fastq.gz | 4.1 GB | ||
| EGAF00004890255 | fastq.gz | 4.1 GB | ||
| EGAF00004890256 | fastq.gz | 4.2 GB | ||
| EGAF00004890257 | fastq.gz | 5.0 GB | ||
| EGAF00004890258 | fastq.gz | 5.2 GB | ||
| EGAF00004890259 | fastq.gz | 4.2 GB | ||
| EGAF00004890260 | fastq.gz | 4.3 GB | ||
| EGAF00004890261 | fastq.gz | 4.3 GB | ||
| EGAF00004890262 | fastq.gz | 4.5 GB | ||
| EGAF00004890263 | fastq.gz | 5.3 GB | ||
| EGAF00004890264 | fastq.gz | 5.4 GB | ||
| EGAF00004890265 | fastq.gz | 4.4 GB | ||
| EGAF00004890266 | fastq.gz | 4.4 GB | ||
| EGAF00004890267 | fastq.gz | 5.4 GB | ||
| EGAF00004890268 | fastq.gz | 5.6 GB | ||
| EGAF00004890269 | fastq.gz | 4.4 GB | ||
| EGAF00004890270 | fastq.gz | 4.5 GB | ||
| EGAF00004890271 | fastq.gz | 4.1 GB | ||
| EGAF00004890272 | fastq.gz | 4.2 GB | ||
| EGAF00004890273 | fastq.gz | 5.5 GB | ||
| EGAF00004890274 | fastq.gz | 5.5 GB | ||
| EGAF00004890275 | fastq.gz | 5.1 GB | ||
| EGAF00004890276 | fastq.gz | 5.2 GB | ||
| EGAF00004890277 | fastq.gz | 4.8 GB | ||
| EGAF00004890278 | fastq.gz | 4.9 GB | ||
| EGAF00004890279 | fastq.gz | 5.8 GB | ||
| EGAF00004890280 | fastq.gz | 6.0 GB | ||
| EGAF00004890281 | fastq.gz | 4.5 GB | ||
| EGAF00004890282 | fastq.gz | 4.6 GB | ||
| EGAF00004890283 | fastq.gz | 4.5 GB | ||
| EGAF00004890284 | fastq.gz | 4.5 GB | ||
| EGAF00004890285 | fastq.gz | 4.4 GB | ||
| EGAF00004890286 | fastq.gz | 4.5 GB | ||
| EGAF00004890287 | fastq.gz | 4.0 GB | ||
| EGAF00004890288 | fastq.gz | 4.1 GB | ||
| EGAF00004890289 | fastq.gz | 4.2 GB | ||
| EGAF00004890290 | fastq.gz | 4.3 GB | ||
| EGAF00004890291 | fastq.gz | 4.0 GB | ||
| EGAF00004890292 | fastq.gz | 4.1 GB | ||
| EGAF00004890293 | fastq.gz | 4.5 GB | ||
| EGAF00004890294 | fastq.gz | 4.5 GB | ||
| EGAF00004890295 | fastq.gz | 4.6 GB | ||
| EGAF00004890296 | fastq.gz | 4.7 GB | ||
| EGAF00004890297 | fastq.gz | 4.2 GB | ||
| EGAF00004890298 | fastq.gz | 4.3 GB | ||
| EGAF00004890299 | fastq.gz | 4.3 GB | ||
| EGAF00004890300 | fastq.gz | 4.4 GB | ||
| EGAF00004890301 | fastq.gz | 4.6 GB | ||
| EGAF00004890302 | fastq.gz | 4.7 GB | ||
| EGAF00004890303 | fastq.gz | 4.4 GB | ||
| EGAF00004890304 | fastq.gz | 4.4 GB | ||
| EGAF00004890305 | fastq.gz | 4.4 GB | ||
| EGAF00004890306 | fastq.gz | 4.5 GB | ||
| EGAF00004890307 | fastq.gz | 5.2 GB | ||
| EGAF00004890308 | fastq.gz | 5.3 GB | ||
| EGAF00004890309 | fastq.gz | 4.7 GB | ||
| EGAF00004890310 | fastq.gz | 4.7 GB | ||
| EGAF00004890313 | fastq.gz | 4.5 GB | ||
| EGAF00004890314 | fastq.gz | 4.5 GB | ||
| EGAF00004890315 | fastq.gz | 5.4 GB | ||
| EGAF00004890316 | fastq.gz | 5.5 GB | ||
| EGAF00004890317 | fastq.gz | 4.0 GB | ||
| EGAF00004890318 | fastq.gz | 4.2 GB | ||
| EGAF00004890319 | fastq.gz | 4.5 GB | ||
| EGAF00004890320 | fastq.gz | 4.5 GB | ||
| EGAF00004890321 | fastq.gz | 3.5 GB | ||
| EGAF00004890322 | fastq.gz | 3.6 GB | ||
| EGAF00004890323 | fastq.gz | 4.1 GB | ||
| EGAF00004890324 | fastq.gz | 4.2 GB | ||
| EGAF00004890325 | fastq.gz | 4.1 GB | ||
| EGAF00004890326 | fastq.gz | 4.2 GB | ||
| EGAF00004890329 | fastq.gz | 4.9 GB | ||
| EGAF00004890330 | fastq.gz | 5.0 GB | ||
| EGAF00004890331 | fastq.gz | 3.5 GB | ||
| EGAF00004890332 | fastq.gz | 3.6 GB | ||
| EGAF00004890333 | fastq.gz | 6.0 GB | ||
| EGAF00004890334 | fastq.gz | 6.1 GB | ||
| EGAF00004890335 | fastq.gz | 3.8 GB | ||
| EGAF00004890336 | fastq.gz | 3.8 GB | ||
| EGAF00004890337 | fastq.gz | 4.4 GB | ||
| EGAF00004890338 | fastq.gz | 4.6 GB | ||
| EGAF00004890339 | fastq.gz | 3.8 GB | ||
| EGAF00004890340 | fastq.gz | 3.8 GB | ||
| EGAF00004890341 | fastq.gz | 5.1 GB | ||
| EGAF00004890342 | fastq.gz | 5.3 GB | ||
| EGAF00004890343 | fastq.gz | 4.9 GB | ||
| EGAF00004890344 | fastq.gz | 5.1 GB | ||
| EGAF00004890347 | fastq.gz | 3.3 GB | ||
| EGAF00004890348 | fastq.gz | 3.4 GB | ||
| EGAF00004890349 | fastq.gz | 4.3 GB | ||
| EGAF00004890350 | fastq.gz | 4.4 GB | ||
| EGAF00004890351 | fastq.gz | 5.2 GB | ||
| EGAF00004890352 | fastq.gz | 5.2 GB | ||
| EGAF00004890353 | fastq.gz | 4.3 GB | ||
| EGAF00004890354 | fastq.gz | 4.5 GB | ||
| EGAF00004890355 | fastq.gz | 6.3 GB | ||
| EGAF00004890356 | fastq.gz | 6.5 GB | ||
| EGAF00004890357 | fastq.gz | 4.8 GB | ||
| EGAF00004890358 | fastq.gz | 4.9 GB | ||
| EGAF00004890359 | fastq.gz | 4.8 GB | ||
| EGAF00004890360 | fastq.gz | 4.9 GB | ||
| EGAF00004890361 | fastq.gz | 5.4 GB | ||
| EGAF00004890362 | fastq.gz | 5.5 GB | ||
| EGAF00004890363 | fastq.gz | 4.1 GB | ||
| EGAF00004890364 | fastq.gz | 4.1 GB | ||
| EGAF00004890367 | fastq.gz | 5.6 GB | ||
| EGAF00004890368 | fastq.gz | 5.8 GB | ||
| EGAF00004890369 | fastq.gz | 4.6 GB | ||
| EGAF00004890370 | fastq.gz | 4.7 GB | ||
| EGAF00004890371 | fastq.gz | 4.5 GB | ||
| EGAF00004890372 | fastq.gz | 4.6 GB | ||
| EGAF00004890373 | fastq.gz | 5.0 GB | ||
| EGAF00004890374 | fastq.gz | 5.1 GB | ||
| EGAF00004890375 | fastq.gz | 4.4 GB | ||
| EGAF00004890376 | fastq.gz | 4.5 GB | ||
| EGAF00004890377 | fastq.gz | 4.4 GB | ||
| EGAF00004890378 | fastq.gz | 4.6 GB | ||
| EGAF00004890379 | fastq.gz | 6.1 GB | ||
| EGAF00004890380 | fastq.gz | 6.3 GB | ||
| EGAF00004890381 | fastq.gz | 5.6 GB | ||
| EGAF00004890382 | fastq.gz | 5.7 GB | ||
| EGAF00004890383 | fastq.gz | 6.3 GB | ||
| EGAF00004890384 | fastq.gz | 6.4 GB | ||
| EGAF00004890385 | fastq.gz | 4.6 GB | ||
| EGAF00004890386 | fastq.gz | 4.7 GB | ||
| EGAF00004890387 | fastq.gz | 6.4 GB | ||
| EGAF00004890388 | fastq.gz | 6.4 GB | ||
| EGAF00004890389 | fastq.gz | 5.1 GB | ||
| EGAF00004890390 | fastq.gz | 5.1 GB | ||
| EGAF00004890391 | fastq.gz | 6.1 GB | ||
| EGAF00004890392 | fastq.gz | 6.3 GB | ||
| EGAF00004890393 | fastq.gz | 3.7 GB | ||
| EGAF00004890394 | fastq.gz | 3.7 GB | ||
| EGAF00004890395 | fastq.gz | 4.6 GB | ||
| EGAF00004890396 | fastq.gz | 4.7 GB | ||
| EGAF00004890397 | fastq.gz | 3.9 GB | ||
| EGAF00004890398 | fastq.gz | 4.1 GB | ||
| EGAF00004890399 | fastq.gz | 3.7 GB | ||
| EGAF00004890400 | fastq.gz | 3.8 GB | ||
| EGAF00004890401 | fastq.gz | 5.2 GB | ||
| EGAF00004890402 | fastq.gz | 5.3 GB | ||
| EGAF00004890403 | fastq.gz | 3.2 GB | ||
| EGAF00004890404 | fastq.gz | 3.2 GB | ||
| EGAF00004890405 | fastq.gz | 3.8 GB | ||
| EGAF00004890406 | fastq.gz | 3.8 GB | ||
| EGAF00004890407 | fastq.gz | 3.8 GB | ||
| EGAF00004890408 | fastq.gz | 4.0 GB | ||
| EGAF00004890409 | fastq.gz | 3.9 GB | ||
| EGAF00004890410 | fastq.gz | 4.0 GB | ||
| EGAF00004890411 | fastq.gz | 4.1 GB | ||
| EGAF00004890412 | fastq.gz | 4.2 GB | ||
| EGAF00004890413 | fastq.gz | 4.5 GB | ||
| EGAF00004890414 | fastq.gz | 4.6 GB | ||
| EGAF00004890415 | fastq.gz | 4.0 GB | ||
| EGAF00004890416 | fastq.gz | 4.1 GB | ||
| EGAF00004890417 | fastq.gz | 5.3 GB | ||
| EGAF00004890418 | fastq.gz | 5.3 GB | ||
| EGAF00004890419 | fastq.gz | 3.7 GB | ||
| EGAF00004890420 | fastq.gz | 3.8 GB | ||
| EGAF00004890421 | fastq.gz | 4.0 GB | ||
| EGAF00004890422 | fastq.gz | 4.1 GB | ||
| EGAF00004890423 | fastq.gz | 4.0 GB | ||
| EGAF00004890424 | fastq.gz | 4.1 GB | ||
| EGAF00004890425 | fastq.gz | 3.8 GB | ||
| EGAF00004890426 | fastq.gz | 3.8 GB | ||
| EGAF00004890427 | fastq.gz | 3.6 GB | ||
| EGAF00004890428 | fastq.gz | 3.7 GB | ||
| EGAF00004890429 | fastq.gz | 3.3 GB | ||
| EGAF00004890430 | fastq.gz | 3.5 GB | ||
| EGAF00004890431 | fastq.gz | 4.8 GB | ||
| EGAF00004890432 | fastq.gz | 4.9 GB | ||
| EGAF00004890433 | fastq.gz | 3.2 GB | ||
| EGAF00004890434 | fastq.gz | 3.3 GB | ||
| EGAF00004890435 | fastq.gz | 3.2 GB | ||
| EGAF00004890436 | fastq.gz | 3.3 GB | ||
| EGAF00004890437 | fastq.gz | 4.3 GB | ||
| EGAF00004890438 | fastq.gz | 4.5 GB | ||
| EGAF00004890441 | fastq.gz | 4.4 GB | ||
| EGAF00004890442 | fastq.gz | 4.5 GB | ||
| EGAF00004890443 | fastq.gz | 5.4 GB | ||
| EGAF00004890444 | fastq.gz | 5.6 GB | ||
| EGAF00004890445 | fastq.gz | 5.3 GB | ||
| EGAF00004890446 | fastq.gz | 5.4 GB | ||
| EGAF00004890447 | fastq.gz | 4.8 GB | ||
| EGAF00004890448 | fastq.gz | 4.9 GB | ||
| EGAF00004890449 | fastq.gz | 4.3 GB | ||
| EGAF00004890450 | fastq.gz | 4.4 GB | ||
| EGAF00004890451 | fastq.gz | 5.2 GB | ||
| EGAF00004890452 | fastq.gz | 5.2 GB | ||
| EGAF00004890453 | fastq.gz | 4.4 GB | ||
| EGAF00004890454 | fastq.gz | 4.5 GB | ||
| EGAF00004890457 | fastq.gz | 5.4 GB | ||
| EGAF00004890458 | fastq.gz | 5.5 GB | ||
| EGAF00004890459 | fastq.gz | 5.1 GB | ||
| EGAF00004890460 | fastq.gz | 5.1 GB | ||
| EGAF00004890461 | fastq.gz | 5.7 GB | ||
| EGAF00004890462 | fastq.gz | 5.8 GB | ||
| EGAF00004890463 | fastq.gz | 5.1 GB | ||
| EGAF00004890464 | fastq.gz | 5.2 GB | ||
| EGAF00004890465 | fastq.gz | 4.3 GB | ||
| EGAF00004890466 | fastq.gz | 4.4 GB | ||
| EGAF00004890467 | fastq.gz | 4.2 GB | ||
| EGAF00004890468 | fastq.gz | 4.4 GB | ||
| EGAF00004890469 | fastq.gz | 5.2 GB | ||
| EGAF00004890470 | fastq.gz | 5.2 GB | ||
| EGAF00004890471 | fastq.gz | 4.6 GB | ||
| EGAF00004890472 | fastq.gz | 4.6 GB | ||
| EGAF00004890475 | fastq.gz | 3.5 GB | ||
| EGAF00004890476 | fastq.gz | 3.7 GB | ||
| EGAF00004890477 | fastq.gz | 4.7 GB | ||
| EGAF00004890478 | fastq.gz | 4.8 GB | ||
| EGAF00004890479 | fastq.gz | 4.3 GB | ||
| EGAF00004890480 | fastq.gz | 4.4 GB | ||
| EGAF00004890481 | fastq.gz | 4.8 GB | ||
| EGAF00004890482 | fastq.gz | 4.9 GB | ||
| EGAF00004890483 | fastq.gz | 4.3 GB | ||
| EGAF00004890484 | fastq.gz | 4.3 GB | ||
| EGAF00004890485 | fastq.gz | 5.2 GB | ||
| EGAF00004890486 | fastq.gz | 5.2 GB | ||
| EGAF00004890487 | fastq.gz | 4.6 GB | ||
| EGAF00004890488 | fastq.gz | 4.8 GB | ||
| 240 Files (1.1 TB) | ||||