CRISPR/Cas9-mediated genome editing of Schistosoma mansoni acetylcholinesterase
Here we report successful gene knock-in (KI) in the eggs of Schistosoma mansoni by combining CRISPR/Cas9 with single-stranded oligodeoxynucleotides (ssODNs). We targeted the acetylcholinesterase (AChE) gene of S. mansoni using two synthetic guide RNAs (gRNAs), X5 and X7, respectively. Liver eggs of S. mansoni were exposed to CRISPR-vector containing X5 or X7 by electroporation. Simultaneously, eggs were transfected with a ssODN donor encoding a stop codon in all six frames. Next generation sequencing analysis revealed that CRISPR/Cas9-mediated editing in S. mansoni eggs resulted in Homology-Directed Repair (HDR) when template DNA ssODN provided. Furthermore, soluble egg antigen (SEA) from AChE-modified eggs exhibited markedly reduced AChE activity compared with controls, indicative that programmed Cas9 cleavage mutated the AChE gene. Following injection of modified schistosome eggs into the tail veins of mice, a significant decrease in granuloma size in the lungs of these animals. Notably, an enhanced Th2 response induced by eggs in lung, and splenocytes small intestine-draining mesenteric lymph node cells was also generated in mice injected with X5-KI eggs in different methods. These findings further demonstrate the power and utility of CRISPR/Cas9-based genome editing for undertaking functional genomics studies in schistosomes.
- 22 samples
- DAC: EGAC00001001798
- Technology: Illumina MiSeq
Policy for DAC EGAC00001001798
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
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EGAS00001004455 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
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EGAF00004838129 | fq.gz | 39.7 MB | ||
EGAF00004838130 | fq.gz | 55.6 MB | ||
EGAF00004838131 | fq.gz | 12.8 MB | ||
EGAF00004838132 | fq.gz | 19.2 MB | ||
EGAF00004838133 | fq.gz | 20.0 MB | ||
EGAF00004838134 | fq.gz | 33.4 MB | ||
EGAF00004838135 | fq.gz | 19.0 MB | ||
EGAF00004838136 | fq.gz | 32.2 MB | ||
EGAF00004838137 | fq.gz | 21.5 MB | ||
EGAF00004838138 | fq.gz | 36.7 MB | ||
EGAF00004838139 | fq.gz | 20.0 MB | ||
EGAF00004838140 | fq.gz | 33.9 MB | ||
EGAF00004838141 | fq.gz | 13.9 MB | ||
EGAF00004838142 | fq.gz | 23.0 MB | ||
EGAF00004838143 | fq.gz | 17.1 MB | ||
EGAF00004838144 | fq.gz | 29.2 MB | ||
EGAF00004838145 | fq.gz | 15.5 MB | ||
EGAF00004838146 | fq.gz | 22.9 MB | ||
EGAF00004838147 | fq.gz | 18.1 MB | ||
EGAF00004838148 | fq.gz | 26.4 MB | ||
EGAF00004838149 | fq.gz | 13.8 MB | ||
EGAF00004838150 | fq.gz | 20.2 MB | ||
EGAF00004838151 | fq.gz | 14.2 MB | ||
EGAF00004838152 | fq.gz | 21.2 MB | ||
EGAF00004838153 | fq.gz | 12.9 MB | ||
EGAF00004838154 | fq.gz | 18.9 MB | ||
EGAF00004838155 | fq.gz | 21.7 MB | ||
EGAF00004838156 | fq.gz | 35.3 MB | ||
EGAF00004838157 | fq.gz | 16.6 MB | ||
EGAF00004838158 | fq.gz | 24.6 MB | ||
EGAF00004838159 | fq.gz | 19.7 MB | ||
EGAF00004838160 | fq.gz | 32.6 MB | ||
EGAF00004838161 | fq.gz | 16.8 MB | ||
EGAF00004838162 | fq.gz | 24.6 MB | ||
EGAF00004838163 | fq.gz | 14.4 MB | ||
EGAF00004838164 | fq.gz | 21.1 MB | ||
EGAF00004838165 | fq.gz | 20.8 MB | ||
EGAF00004838166 | fq.gz | 34.4 MB | ||
EGAF00004838167 | fq.gz | 18.7 MB | ||
EGAF00004838168 | fq.gz | 31.5 MB | ||
EGAF00004838169 | fq.gz | 17.7 MB | ||
EGAF00004838170 | fq.gz | 29.4 MB | ||
EGAF00004838171 | fq.gz | 15.3 MB | ||
EGAF00004838172 | fq.gz | 22.6 MB | ||
44 Files (1.0 GB) |