FASTQ files

Raw FASTQ files obtained from in situ Hi-C of 16 normal B cells (3 naive B cells, 3 germinal center B cells, 3 plasma cells, and 3 memory B cells, together with a merge file for each subpopulation), 7 chronic lymphocytic leukemias (2 unmutated IGHV and 5 mutated IGHV), and 5 mantle cell lymphomas (2 conventional and 3 leukemic non-nodal).

28 samples
DAC: EGAC00001001720
Technology: Illumina HiSeq 2500

Access Policy1 Study Files

Metadata

Request Access

GRU-CC DUO:0000005 (version: 2019-01-07)general research use and clinical careThis data use limitation indicates that use is allowed for health/medical/biomedical purposes and other biological research, including the study of population origins or ancestry.
RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
NMDS DUO:0000015 (version: 2019-01-07)no general methods researchThis data use modifier indicates that use does not allow methods development research (e.g., development of software or algorithms).
IRB DUO:0000021 (version: 2019-01-07)ethics approval requiredThis data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
US DUO:0000026 (version: 2019-01-07)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
PS DUO:0000027 (version: 2019-01-07)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.

Contact the DAC for additional information.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
	Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00004726920	fastq.gz	10.8 GB
EGAF00004726921	fastq.gz	11.4 GB
EGAF00004726922	fastq.gz	34.4 GB
EGAF00004726923	fastq.gz	36.6 GB
EGAF00004726924	fastq.gz	35.5 GB
EGAF00004726925	fastq.gz	37.4 GB
EGAF00004726926	fastq.gz	11.6 GB
EGAF00004726927	fastq.gz	12.2 GB
EGAF00004726928	fastq.gz	13.1 GB
EGAF00004726929	fastq.gz	13.8 GB
EGAF00004726930	fastq.gz	11.8 GB
EGAF00004726931	fastq.gz	11.8 GB
EGAF00004726932	fastq.gz	11.2 GB
EGAF00004726933	fastq.gz	12.0 GB
EGAF00004726934	fastq.gz	11.4 GB
EGAF00004726935	fastq.gz	12.1 GB
EGAF00004726936	fastq.gz	35.1 GB
EGAF00004726937	fastq.gz	36.9 GB
EGAF00004726938	fastq.gz	11.1 GB
EGAF00004726939	fastq.gz	11.8 GB
EGAF00004726940	fastq.gz	12.2 GB
EGAF00004726941	fastq.gz	12.9 GB
EGAF00004726942	fastq.gz	11.7 GB
EGAF00004726943	fastq.gz	12.3 GB
EGAF00004726944	fastq.gz	37.9 GB
EGAF00004726945	fastq.gz	39.9 GB
EGAF00004726946	fastq.gz	13.8 GB
EGAF00004726947	fastq.gz	14.4 GB
EGAF00004726948	fastq.gz	11.9 GB
EGAF00004726949	fastq.gz	12.6 GB
EGAF00004726950	fastq.gz	12.2 GB
EGAF00004726951	fastq.gz	12.9 GB
EGAF00004726952	fastq.gz	11.5 GB
EGAF00004726953	fastq.gz	11.2 GB
EGAF00004726954	fastq.gz	8.0 GB
EGAF00004726955	fastq.gz	8.5 GB
EGAF00004726956	fastq.gz	10.8 GB
EGAF00004726957	fastq.gz	10.6 GB
EGAF00004726958	fastq.gz	13.0 GB
EGAF00004726959	fastq.gz	13.6 GB
EGAF00004726960	fastq.gz	10.6 GB
EGAF00004726961	fastq.gz	10.4 GB
EGAF00004726962	fastq.gz	12.3 GB
EGAF00004726963	fastq.gz	12.9 GB
EGAF00004726964	fastq.gz	13.5 GB
EGAF00004726965	fastq.gz	14.1 GB
EGAF00004726966	fastq.gz	10.1 GB
EGAF00004726967	fastq.gz	9.8 GB
EGAF00004726968	fastq.gz	8.3 GB
EGAF00004726969	fastq.gz	8.7 GB
EGAF00004726970	fastq.gz	8.3 GB
EGAF00004726971	fastq.gz	8.9 GB
EGAF00004726972	fastq.gz	8.7 GB
EGAF00004726973	fastq.gz	9.0 GB
EGAF00004726974	fastq.gz	9.4 GB
EGAF00004726975	fastq.gz	9.7 GB
56 Files (838.1 GB)