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Whole exome sequencing datasets for Low-grade Serous Ovarian Carcinoma

This dataset includes whole exome sequencing reads from 10 normal and 14 cell lines based on Agilent SureSelect XT Human All Exon v6. They are all 2*100bp reads sequenced using Illumina HiSeq4000.

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Data access policy for Low-grade Serous Ovarian Carcinoma

DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the sequencing data generated in the "Multiomics Characterization of Low-grade Serous Ovarian Carcinoma project" modified from THE WELLCOME TRUST CASE-CONTROL CONSORTIUM DATA ACCESS AGREEMENT. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly. Definitions: Consortium means Low-grade Serous Ovarian Carcinoma Data Access Commitee. Data means all and any human genetic data obtained from the Consortium. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to abide by the terms outlined in the Consortium 'Publications Policy' as set out in Schedule 1. 9. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording will be provided once you contact Consortium. 10. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 11. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 12. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 13. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 14. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 15. You agree that you will submit a report to the Consortium Data Access Committee, if requested, on completion of the agreed purpose. The Consortium Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 16. You accept that the Data is protected by and subject to international laws and that You are responsible for ensuring compliance with any such applicable law. The Consortium Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004719844 fastq.gz 2.9 GB
EGAF00004719845 fastq.gz 3.0 GB
EGAF00004719846 fastq.gz 2.8 GB
EGAF00004719847 fastq.gz 3.0 GB
EGAF00004719848 fastq.gz 2.8 GB
EGAF00004719849 fastq.gz 2.9 GB
EGAF00004719850 fastq.gz 1.5 GB
EGAF00004719851 fastq.gz 1.7 GB
EGAF00004719852 fastq.gz 1.5 GB
EGAF00004719853 fastq.gz 1.7 GB
EGAF00004719854 fastq.gz 1.5 GB
EGAF00004719855 fastq.gz 1.7 GB
EGAF00004719856 fastq.gz 1.5 GB
EGAF00004719857 fastq.gz 1.7 GB
EGAF00004719858 fastq.gz 2.8 GB
EGAF00004719859 fastq.gz 2.9 GB
EGAF00004719860 fastq.gz 2.8 GB
EGAF00004719861 fastq.gz 2.9 GB
EGAF00004719862 fastq.gz 2.8 GB
EGAF00004719863 fastq.gz 2.9 GB
EGAF00004719864 fastq.gz 2.8 GB
EGAF00004719865 fastq.gz 2.9 GB
EGAF00004719866 fastq.gz 2.8 GB
EGAF00004719867 fastq.gz 2.9 GB
EGAF00004719868 fastq.gz 2.8 GB
EGAF00004719869 fastq.gz 2.9 GB
EGAF00004719870 fastq.gz 2.8 GB
EGAF00004719871 fastq.gz 2.9 GB
EGAF00004719872 fastq.gz 2.8 GB
EGAF00004719873 fastq.gz 2.9 GB
EGAF00004719874 fastq.gz 2.8 GB
EGAF00004719875 fastq.gz 2.9 GB
EGAF00004719876 fastq.gz 1.5 GB
EGAF00004719877 fastq.gz 1.7 GB
EGAF00004719878 fastq.gz 1.5 GB
EGAF00004719879 fastq.gz 1.7 GB
EGAF00004719880 fastq.gz 1.5 GB
EGAF00004719881 fastq.gz 1.7 GB
EGAF00004719882 fastq.gz 1.5 GB
EGAF00004719883 fastq.gz 1.7 GB
EGAF00004719884 fastq.gz 2.8 GB
EGAF00004719885 fastq.gz 3.0 GB
EGAF00004719886 fastq.gz 2.8 GB
EGAF00004719887 fastq.gz 2.9 GB
EGAF00004719888 fastq.gz 2.7 GB
EGAF00004719889 fastq.gz 2.9 GB
EGAF00004719890 fastq.gz 2.8 GB
EGAF00004719891 fastq.gz 2.9 GB
EGAF00004719892 fastq.gz 2.8 GB
EGAF00004719893 fastq.gz 2.9 GB
EGAF00004719894 fastq.gz 2.8 GB
EGAF00004719895 fastq.gz 2.9 GB
EGAF00004719896 fastq.gz 2.8 GB
EGAF00004719897 fastq.gz 2.9 GB
EGAF00004719898 fastq.gz 2.8 GB
EGAF00004719899 fastq.gz 2.9 GB
56 Files (140.2 GB)