Medulloblastoma whole and focused exome sequencing (n=13 patients, n=37 samples)
Whole exome sequencing: 24 samples matched tumor-normal and one matched CSF. Focused exome sequencing: 17 samples matched tumor-normal-2 time point CSF.
- 35 samples
- DAC: EGAC00001001727
- Technologies: Illumina HiSeq 2500, NextSeq 550
- GRU-CC DUO:0000005 (version: 2019-01-07)general research use and clinical careThis data use limitation indicates that use is allowed for health/medical/biomedical purposes and other biological research, including the study of population origins or ancestry.
- RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
- PUB DUO:0000019 (version: 2019-01-07)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
- US DUO:0000026 (version: 2019-01-07)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
- IS DUO:0000028 (version: 2019-01-07)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
The Data in this study shall be used for the advancement of medical and biomedical research.
1. You agree to use the Data only for the advancement of medical and biomedical research, according to the consent obtained from sample donors. 2. You agree not to use the data from this study for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or program management. 6. You agree to use the data for the approved purpose and project described in your application. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives. 9. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 10. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 11. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 12. You accept that it may be necessary to alter the terms of this agreement from time to time in order to address new concerns. In this event, your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004672160 | fastq.gz | 3.5 GB | ||
| EGAF00004672161 | fastq.gz | 3.5 GB | ||
| EGAF00004672162 | fastq.gz | 3.0 GB | ||
| EGAF00004672163 | fastq.gz | 3.1 GB | ||
| EGAF00004672166 | fastq.gz | 1.6 GB | ||
| EGAF00004672167 | fastq.gz | 1.6 GB | ||
| EGAF00004672168 | fastq.gz | 2.9 GB | ||
| EGAF00004672169 | fastq.gz | 2.9 GB | ||
| EGAF00004672170 | fastq.gz | 3.1 GB | ||
| EGAF00004672171 | fastq.gz | 3.2 GB | ||
| EGAF00004672172 | fastq.gz | 771.8 MB | ||
| EGAF00004672173 | fastq.gz | 781.9 MB | ||
| EGAF00004672176 | fastq.gz | 3.3 GB | ||
| EGAF00004672177 | fastq.gz | 3.3 GB | ||
| EGAF00004672178 | fastq.gz | 3.6 GB | ||
| EGAF00004672179 | fastq.gz | 3.7 GB | ||
| EGAF00004672180 | fastq.gz | 759.2 MB | ||
| EGAF00004672181 | fastq.gz | 770.2 MB | ||
| EGAF00004672182 | fastq.gz | 1.5 GB | ||
| EGAF00004672183 | fastq.gz | 1.5 GB | ||
| EGAF00004672204 | fastq.gz | 2.2 GB | ||
| EGAF00004672205 | fastq.gz | 2.2 GB | ||
| EGAF00004672230 | fastq.gz | 11.0 GB | ||
| EGAF00004672231 | fastq.gz | 11.8 GB | ||
| EGAF00004679762 | fastq.gz | 2.1 GB | ||
| EGAF00004679763 | fastq.gz | 2.1 GB | ||
| EGAF00004679764 | fastq.gz | 2.0 GB | ||
| EGAF00004679765 | fastq.gz | 2.0 GB | ||
| EGAF00004679766 | fastq.gz | 2.2 GB | ||
| EGAF00004679767 | fastq.gz | 2.2 GB | ||
| EGAF00004679768 | fastq.gz | 2.7 GB | ||
| EGAF00004679769 | fastq.gz | 2.8 GB | ||
| EGAF00004679770 | fastq.gz | 1.1 GB | ||
| EGAF00004679771 | fastq.gz | 1.1 GB | ||
| EGAF00004679772 | fastq.gz | 4.1 GB | ||
| EGAF00004679773 | fastq.gz | 4.1 GB | ||
| EGAF00004679774 | fastq.gz | 2.4 GB | ||
| EGAF00004679775 | fastq.gz | 2.4 GB | ||
| EGAF00004679776 | fastq.gz | 3.1 GB | ||
| EGAF00004679777 | fastq.gz | 3.1 GB | ||
| EGAF00004679778 | fastq.gz | 2.5 GB | ||
| EGAF00004679779 | fastq.gz | 2.6 GB | ||
| EGAF00004679780 | fastq.gz | 2.9 GB | ||
| EGAF00004679781 | fastq.gz | 2.9 GB | ||
| EGAF00004679782 | fastq.gz | 2.6 GB | ||
| EGAF00004679783 | fastq.gz | 2.6 GB | ||
| EGAF00004679784 | fastq.gz | 2.2 GB | ||
| EGAF00004679785 | fastq.gz | 2.2 GB | ||
| EGAF00004679786 | fastq.gz | 2.0 GB | ||
| EGAF00004679787 | fastq.gz | 2.1 GB | ||
| EGAF00004679788 | fastq.gz | 2.8 GB | ||
| EGAF00004679789 | fastq.gz | 2.8 GB | ||
| EGAF00004679790 | fastq.gz | 2.5 GB | ||
| EGAF00004679791 | fastq.gz | 2.6 GB | ||
| EGAF00004679792 | fastq.gz | 2.6 GB | ||
| EGAF00004679793 | fastq.gz | 2.6 GB | ||
| EGAF00004679794 | fastq.gz | 2.5 GB | ||
| EGAF00004679795 | fastq.gz | 2.5 GB | ||
| EGAF00004679796 | fastq.gz | 2.9 GB | ||
| EGAF00004679797 | fastq.gz | 3.0 GB | ||
| EGAF00004679798 | fastq.gz | 1.9 GB | ||
| EGAF00004679799 | fastq.gz | 1.9 GB | ||
| EGAF00004679800 | fastq.gz | 2.8 GB | ||
| EGAF00004679801 | fastq.gz | 2.9 GB | ||
| EGAF00004679802 | fastq.gz | 1.8 GB | ||
| EGAF00004679803 | fastq.gz | 1.8 GB | ||
| EGAF00004679804 | fastq.gz | 3.4 GB | ||
| EGAF00004679805 | fastq.gz | 3.5 GB | ||
| EGAF00004679806 | fastq.gz | 1.6 GB | ||
| EGAF00004679807 | fastq.gz | 1.6 GB | ||
| EGAF00004679808 | fastq.gz | 3.3 GB | ||
| EGAF00004679809 | fastq.gz | 3.3 GB | ||
| 72 Files (196.3 GB) | ||||