Primary tumor/metastatic/germline DNA trios equences files
Exome sequences of primary tumor/metastatic/germline DNA trios. Tumoral and germline samples were sequenced to an expected depth of respectively 150M and 50M reads in order to obtain differential depth (>100X versus >30X). Submitted data are paired-end fastq files.
- 81 samples
- DAC: EGAC00001001687
Policy to access fastq files of matched primary tumor and metastatic breast cancer samples and associated germline samples.
* Conditions of use of the data The applicants undertake to respect all the following measures and to have them respected by their staff as well as any other person(s) assisting them with the use of the data: - To collect only data adequate, relevant, limited and strictly necessary to the specific treatment that it with these data; - Do not use the data to which they can access for purposes other than those indicated in the application request; - Disclose this data only to persons duly authorized by reason of their duties and who have been indicated in the data access request file; - Do not make any copy of this data except that it is necessary for the execution of their research; - Take all necessary measures to avoid misuse or fraudulent use of this data; - Ensure that only secure means of communication will be used to transfer this data; - At the end of the research project, to fully restore the data, computer files and any information related to these data. When this task falls within its remit, the applicants undertake to ensure that the persons from whom they collect and / or use the data have been previously informed of the specific treatment that they are carrying out with their data. * Data destruction At the end of the search, the applicants undertake, after having made sure of the terms relating to reversibility: - Destroy all data - Return all data to the DAC - Return the data to the subcontractor designated by the DAC The return must be accompanied by the destruction of all data (including copies) in the information systems of the applicant and their collaborators.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004187921 | fastq.gz | 3.5 GB | ||
| EGAF00004187922 | fastq.gz | 3.6 GB | ||
| EGAF00004187923 | fastq.gz | 1.9 GB | ||
| EGAF00004187924 | fastq.gz | 1.9 GB | ||
| EGAF00004187925 | fastq.gz | 6.9 GB | ||
| EGAF00004187926 | fastq.gz | 7.0 GB | ||
| EGAF00004187927 | fastq.gz | 6.8 GB | ||
| EGAF00004187928 | fastq.gz | 6.8 GB | ||
| EGAF00004187929 | fastq.gz | 2.2 GB | ||
| EGAF00004187930 | fastq.gz | 2.3 GB | ||
| EGAF00004187931 | fastq.gz | 5.6 GB | ||
| EGAF00004187932 | fastq.gz | 5.7 GB | ||
| EGAF00004187933 | fastq.gz | 7.4 GB | ||
| EGAF00004187934 | fastq.gz | 7.4 GB | ||
| EGAF00004187935 | fastq.gz | 2.1 GB | ||
| EGAF00004187936 | fastq.gz | 2.1 GB | ||
| EGAF00004187937 | fastq.gz | 6.8 GB | ||
| EGAF00004187938 | fastq.gz | 6.9 GB | ||
| EGAF00004187939 | fastq.gz | 6.8 GB | ||
| EGAF00004187940 | fastq.gz | 6.9 GB | ||
| EGAF00004187941 | fastq.gz | 2.6 GB | ||
| EGAF00004187942 | fastq.gz | 2.7 GB | ||
| EGAF00004187943 | fastq.gz | 7.0 GB | ||
| EGAF00004187944 | fastq.gz | 7.0 GB | ||
| EGAF00004187945 | fastq.gz | 7.9 GB | ||
| EGAF00004187946 | fastq.gz | 7.9 GB | ||
| EGAF00004187947 | fastq.gz | 2.3 GB | ||
| EGAF00004187948 | fastq.gz | 2.3 GB | ||
| EGAF00004187949 | fastq.gz | 7.7 GB | ||
| EGAF00004187950 | fastq.gz | 7.8 GB | ||
| EGAF00004187951 | fastq.gz | 10.1 GB | ||
| EGAF00004187952 | fastq.gz | 10.2 GB | ||
| EGAF00004187953 | fastq.gz | 2.3 GB | ||
| EGAF00004187954 | fastq.gz | 2.3 GB | ||
| EGAF00004187955 | fastq.gz | 5.7 GB | ||
| EGAF00004187956 | fastq.gz | 5.8 GB | ||
| EGAF00004187957 | fastq.gz | 5.5 GB | ||
| EGAF00004187958 | fastq.gz | 5.5 GB | ||
| EGAF00004187959 | fastq.gz | 1.5 GB | ||
| EGAF00004187960 | fastq.gz | 1.5 GB | ||
| EGAF00004187961 | fastq.gz | 5.3 GB | ||
| EGAF00004187962 | fastq.gz | 5.3 GB | ||
| EGAF00004187963 | fastq.gz | 6.5 GB | ||
| EGAF00004187964 | fastq.gz | 6.5 GB | ||
| EGAF00004187965 | fastq.gz | 1.5 GB | ||
| EGAF00004187966 | fastq.gz | 1.5 GB | ||
| EGAF00004187967 | fastq.gz | 5.1 GB | ||
| EGAF00004187968 | fastq.gz | 5.1 GB | ||
| EGAF00004187969 | fastq.gz | 4.7 GB | ||
| EGAF00004187970 | fastq.gz | 4.8 GB | ||
| EGAF00004187971 | fastq.gz | 2.0 GB | ||
| EGAF00004187972 | fastq.gz | 2.1 GB | ||
| EGAF00004187973 | fastq.gz | 4.8 GB | ||
| EGAF00004187974 | fastq.gz | 4.8 GB | ||
| EGAF00004187975 | fastq.gz | 6.7 GB | ||
| EGAF00004187976 | fastq.gz | 6.7 GB | ||
| EGAF00004187977 | fastq.gz | 2.1 GB | ||
| EGAF00004187978 | fastq.gz | 2.1 GB | ||
| EGAF00004187979 | fastq.gz | 5.6 GB | ||
| EGAF00004187980 | fastq.gz | 5.6 GB | ||
| EGAF00004187981 | fastq.gz | 5.6 GB | ||
| EGAF00004187982 | fastq.gz | 5.6 GB | ||
| EGAF00004187983 | fastq.gz | 1.8 GB | ||
| EGAF00004187984 | fastq.gz | 1.8 GB | ||
| EGAF00004187985 | fastq.gz | 5.6 GB | ||
| EGAF00004187986 | fastq.gz | 5.7 GB | ||
| EGAF00004187987 | fastq.gz | 4.7 GB | ||
| EGAF00004187988 | fastq.gz | 4.7 GB | ||
| EGAF00004187989 | fastq.gz | 1.9 GB | ||
| EGAF00004187990 | fastq.gz | 1.9 GB | ||
| EGAF00004187991 | fastq.gz | 5.5 GB | ||
| EGAF00004187992 | fastq.gz | 5.5 GB | ||
| EGAF00004187993 | fastq.gz | 5.9 GB | ||
| EGAF00004187994 | fastq.gz | 5.9 GB | ||
| EGAF00004187995 | fastq.gz | 1.8 GB | ||
| EGAF00004187996 | fastq.gz | 1.8 GB | ||
| EGAF00004187997 | fastq.gz | 5.6 GB | ||
| EGAF00004187998 | fastq.gz | 5.6 GB | ||
| EGAF00004187999 | fastq.gz | 5.5 GB | ||
| EGAF00004188000 | fastq.gz | 5.5 GB | ||
| EGAF00004188001 | fastq.gz | 2.2 GB | ||
| EGAF00004188002 | fastq.gz | 2.2 GB | ||
| EGAF00004188003 | fastq.gz | 7.7 GB | ||
| EGAF00004188004 | fastq.gz | 7.8 GB | ||
| EGAF00004188005 | fastq.gz | 5.5 GB | ||
| EGAF00004188006 | fastq.gz | 5.6 GB | ||
| EGAF00004188007 | fastq.gz | 1.8 GB | ||
| EGAF00004188008 | fastq.gz | 1.8 GB | ||
| EGAF00004188009 | fastq.gz | 6.7 GB | ||
| EGAF00004188010 | fastq.gz | 6.8 GB | ||
| EGAF00004188011 | fastq.gz | 5.3 GB | ||
| EGAF00004188012 | fastq.gz | 5.4 GB | ||
| EGAF00004188013 | fastq.gz | 1.6 GB | ||
| EGAF00004188014 | fastq.gz | 1.7 GB | ||
| EGAF00004188015 | fastq.gz | 5.2 GB | ||
| EGAF00004188016 | fastq.gz | 5.3 GB | ||
| EGAF00004188017 | fastq.gz | 4.9 GB | ||
| EGAF00004188018 | fastq.gz | 5.0 GB | ||
| EGAF00004188019 | fastq.gz | 1.7 GB | ||
| EGAF00004188020 | fastq.gz | 1.7 GB | ||
| EGAF00004188021 | fastq.gz | 4.6 GB | ||
| EGAF00004188022 | fastq.gz | 4.6 GB | ||
| EGAF00004188023 | fastq.gz | 5.1 GB | ||
| EGAF00004188024 | fastq.gz | 5.2 GB | ||
| EGAF00004188025 | fastq.gz | 1.6 GB | ||
| EGAF00004188026 | fastq.gz | 1.7 GB | ||
| EGAF00004188027 | fastq.gz | 5.8 GB | ||
| EGAF00004188028 | fastq.gz | 5.8 GB | ||
| EGAF00004188029 | fastq.gz | 6.4 GB | ||
| EGAF00004188030 | fastq.gz | 6.4 GB | ||
| EGAF00004188031 | fastq.gz | 1.5 GB | ||
| EGAF00004188032 | fastq.gz | 1.5 GB | ||
| EGAF00004188033 | fastq.gz | 4.9 GB | ||
| EGAF00004188034 | fastq.gz | 4.9 GB | ||
| EGAF00004188035 | fastq.gz | 6.2 GB | ||
| EGAF00004188036 | fastq.gz | 6.3 GB | ||
| EGAF00004188037 | fastq.gz | 1.7 GB | ||
| EGAF00004188038 | fastq.gz | 1.7 GB | ||
| EGAF00004188039 | fastq.gz | 6.1 GB | ||
| EGAF00004188040 | fastq.gz | 6.2 GB | ||
| EGAF00004188041 | fastq.gz | 6.6 GB | ||
| EGAF00004188042 | fastq.gz | 6.7 GB | ||
| EGAF00004188043 | fastq.gz | 1.9 GB | ||
| EGAF00004188044 | fastq.gz | 1.9 GB | ||
| EGAF00004188045 | fastq.gz | 6.5 GB | ||
| EGAF00004188046 | fastq.gz | 6.6 GB | ||
| EGAF00004188047 | fastq.gz | 7.2 GB | ||
| EGAF00004188048 | fastq.gz | 7.3 GB | ||
| EGAF00004188049 | fastq.gz | 3.3 GB | ||
| EGAF00004188050 | fastq.gz | 3.3 GB | ||
| EGAF00004188051 | fastq.gz | 6.7 GB | ||
| EGAF00004188052 | fastq.gz | 6.8 GB | ||
| EGAF00004188053 | fastq.gz | 5.5 GB | ||
| EGAF00004188054 | fastq.gz | 5.6 GB | ||
| EGAF00004188055 | fastq.gz | 1.3 GB | ||
| EGAF00004188056 | fastq.gz | 1.3 GB | ||
| EGAF00004188057 | fastq.gz | 4.1 GB | ||
| EGAF00004188058 | fastq.gz | 4.1 GB | ||
| EGAF00004188059 | fastq.gz | 3.1 GB | ||
| EGAF00004188060 | fastq.gz | 3.2 GB | ||
| EGAF00004188061 | fastq.gz | 3.9 GB | ||
| EGAF00004188062 | fastq.gz | 3.9 GB | ||
| EGAF00004188063 | fastq.gz | 6.7 GB | ||
| EGAF00004188064 | fastq.gz | 6.8 GB | ||
| EGAF00004188065 | fastq.gz | 11.8 GB | ||
| EGAF00004188066 | fastq.gz | 12.0 GB | ||
| EGAF00004188067 | fastq.gz | 1.4 GB | ||
| EGAF00004188068 | fastq.gz | 1.4 GB | ||
| EGAF00004188069 | fastq.gz | 4.3 GB | ||
| EGAF00004188070 | fastq.gz | 4.4 GB | ||
| EGAF00004188071 | fastq.gz | 1.7 GB | ||
| EGAF00004188072 | fastq.gz | 1.8 GB | ||
| EGAF00004188073 | fastq.gz | 563.1 MB | ||
| EGAF00004188074 | fastq.gz | 568.4 MB | ||
| EGAF00004188075 | fastq.gz | 6.7 GB | ||
| EGAF00004188076 | fastq.gz | 6.8 GB | ||
| EGAF00004188077 | fastq.gz | 8.2 GB | ||
| EGAF00004188078 | fastq.gz | 8.3 GB | ||
| EGAF00004188079 | fastq.gz | 3.5 GB | ||
| EGAF00004188080 | fastq.gz | 3.6 GB | ||
| EGAF00004188081 | fastq.gz | 9.8 GB | ||
| EGAF00004188082 | fastq.gz | 10.0 GB | ||
| 162 Files (768.1 GB) | ||||