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Collection of Genotypic and Ethnographic Information from Individuals of South African Ethnic Groups

Whole genome sequencing data of 84 Nama individuals with KhoeSan ancestry from southern Africa in phased VCF format. Variants were called/phased as part of the African Genome Resource. The data has been aligned to GRCh37.

Request Access

Qualified researchers can request access to the data by completing a Data Access Request form which will be evaluated by the Data Access Committee who wil consult with a community representative, the Health Research Ethics Committee of Stellenbosch and the Stellenbosch University Contracts Office.

Qualified researchers can request access to the data by completing a Data Access Request form which will be evaluated by the Data Access Committee who wil consult with a community representative, the Health Research Ethics Committee of Stellenbosch and the Stellenbosch University Contracts Office. Data access will be for approved use and will be governed by the provisions laid out in the associated informed consent of individual data subjects and of the Health Research Ethics Committee of Stellenbosch University. All investigators will have to sign a Data Transfer Agreement as stipulated by the Stellenbosch University Contracts Office. A qualified researcher refers to a senior investigator who is employed or legitimately affiliated with an academic, non-profit or government institution and who has a track record in the field. Researchers granted access to Project Data must feedback the results of their research to the Data Access Committee, after publication for distribution to the community representative. Access is conditional upon availability of data and on signed agreement by the researcher(s) and the responsible employing institution to abide by the policies and conditions related to publication, data ownership, data return, intellectual property rights, data disposal, ethical approval, confidentiality and commercialization referred herein.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003952475 vcf.gz 69.4 MB
EGAF00003952476 vcf.gz 43.6 MB
EGAF00003952477 vcf.gz 44.1 MB
EGAF00003952478 vcf.gz 42.2 MB
EGAF00003952479 vcf.gz 31.9 MB
EGAF00003952480 vcf.gz 29.1 MB
EGAF00003952481 vcf.gz 26.2 MB
EGAF00003952482 vcf.gz 28.7 MB
EGAF00003952483 vcf.gz 24.6 MB
EGAF00003952484 vcf.gz 25.3 MB
EGAF00003952485 vcf.gz 19.2 MB
EGAF00003952486 vcf.gz 77.3 MB
EGAF00003952487 vcf.gz 20.2 MB
EGAF00003952488 vcf.gz 12.0 MB
EGAF00003952489 vcf.gz 11.7 MB
EGAF00003952490 vcf.gz 64.4 MB
EGAF00003952491 vcf.gz 62.9 MB
EGAF00003952492 vcf.gz 58.1 MB
EGAF00003952493 vcf.gz 54.7 MB
EGAF00003952494 vcf.gz 51.2 MB
EGAF00003952495 vcf.gz 50.7 MB
EGAF00003952496 vcf.gz 38.6 MB
EGAF00003952497 vcf.gz 1.1 MB
EGAF00003952498 vcf.gz 107.6 kB
EGAF00003952499 vcf.gz 35.1 MB
25 Files (922.5 MB)