Whole exome sequencing analysis on patient-derived cervical cancer tissues and respective tumoroids
Whole exome sequencing (WES) was performed on the matched tumor and organoid pairs from 7 cervical cancer patients. The DNA was sequenced on NovaSeq6000 platform with 8Gb sequencing coverage. WES data was mapped against human reference genome GRCh38 by using BWA (v0.7.5) mapping tool.
- 17 samples
- DAC: EGAC00001001864
- Technology: Illumina NovaSeq 6000
DUO:0000007 version: 2019-01-07
disease specific research
This data use permission indicates that use is allowed provided it is related to the specified disease.
ModifiersMONDO:0006517
The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes.
Please contact the DAC for the most up to date policies.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004439 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF00003945919 | bam | 3.1 GB |
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| EGAF00003945920 | bam | 3.1 GB |
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| EGAF00003945921 | bam | 4.1 GB |
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| EGAF00003945922 | bam | 2.9 GB |
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| EGAF00003945923 | bam | 3.3 GB |
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| EGAF00003945924 | bam | 3.4 GB |
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| EGAF00003945925 | bam | 4.5 GB |
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| EGAF00003945926 | bam | 3.1 GB |
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| EGAF00003945927 | bam | 3.5 GB |
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| EGAF00003945928 | bam | 3.1 GB |
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| EGAF00003945929 | bam | 3.1 GB |
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| EGAF00003945930 | bam | 2.7 GB |
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| EGAF00003945931 | bam | 3.5 GB |
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| EGAF00003945932 | bam | 3.0 GB |
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| EGAF00004823696 | bam | 3.5 GB |
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| EGAF00004823697 | bam | 3.2 GB |
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| EGAF00004823698 | bam | 3.1 GB |
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| 17 Files (56.2 GB) | ||||