Single cell characterization of arrested B-lymphoid differentiation and leukemic cell states in ETV6-RUNX1-positive pediatric leukemia
Leukemic bone marrow in primary ETV6-RUNX1 positive acute lymphoblastic leukemia samples (Six diagnostic and two 15 days after treatment) using Chromium 3' single cell RNA-seq. Samples sequenced on 1-3 lanes and raw fastq files provided for each sample.
- 8 samples
- DAC: EGAC00001001551
- Technology: Illumina HiSeq 3000
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004374 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00003600023 | fastq.gz | 1.8 GB | ||
| EGAF00003600024 | fastq.gz | 6.6 GB | ||
| EGAF00003600025 | fastq.gz | 6.8 GB | ||
| EGAF00003600026 | fastq.gz | 23.5 GB | ||
| EGAF00003600027 | fastq.gz | 1.9 GB | ||
| EGAF00003600028 | fastq.gz | 6.7 GB | ||
| EGAF00003600029 | fastq.gz | 1.9 GB | ||
| EGAF00003600030 | fastq.gz | 6.9 GB | ||
| EGAF00003600031 | fastq.gz | 1.7 GB | ||
| EGAF00003600032 | fastq.gz | 5.9 GB | ||
| EGAF00003600033 | fastq.gz | 1.8 GB | ||
| EGAF00003600034 | fastq.gz | 6.5 GB | ||
| EGAF00003600035 | fastq.gz | 5.7 GB | ||
| EGAF00003600036 | fastq.gz | 19.3 GB | ||
| EGAF00003600037 | fastq.gz | 1.9 GB | ||
| EGAF00003600038 | fastq.gz | 6.9 GB | ||
| EGAF00003600039 | fastq.gz | 3.5 GB | ||
| EGAF00003600040 | fastq.gz | 10.3 GB | ||
| EGAF00003600041 | fastq.gz | 1.6 GB | ||
| EGAF00003600042 | fastq.gz | 5.7 GB | ||
| EGAF00003600043 | fastq.gz | 6.4 GB | ||
| EGAF00003600044 | fastq.gz | 20.8 GB | ||
| EGAF00003600045 | fastq.gz | 1.9 GB | ||
| EGAF00003600046 | fastq.gz | 6.7 GB | ||
| EGAF00003600047 | fastq.gz | 1.9 GB | ||
| EGAF00003600048 | fastq.gz | 6.7 GB | ||
| EGAF00003600049 | fastq.gz | 3.4 GB | ||
| EGAF00003600050 | fastq.gz | 10.0 GB | ||
| EGAF00003600051 | fastq.gz | 1.9 GB | ||
| EGAF00003600052 | fastq.gz | 6.8 GB | ||
| EGAF00003600053 | fastq.gz | 1.7 GB | ||
| EGAF00003600054 | fastq.gz | 5.8 GB | ||
| EGAF00003600055 | fastq.gz | 5.8 GB | ||
| EGAF00003600056 | fastq.gz | 19.9 GB | ||
| EGAF00003600057 | fastq.gz | 2.0 GB | ||
| EGAF00003600058 | fastq.gz | 7.1 GB | ||
| 36 Files (235.5 GB) | ||||