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sWGS of RCC patients

Paired end shallow whole genome sequencing (sWGS) data for the identification of somatic copy number alterations (SCNA) and the estimation of tumor fractions in plasma DNA of renal cell carcinoma (RCC) patients (MonRec Cohort)

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Whole-genome sequencing cfDNA

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to the study EGAS00001003206 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer (ellen.heitzer@medunigraz.at) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003288518 fastq.gz 738.0 MB
EGAF00003288519 fastq.gz 742.5 MB
EGAF00003288520 fastq.gz 766.7 MB
EGAF00003288521 fastq.gz 800.9 MB
EGAF00003288522 fastq.gz 535.4 MB
EGAF00003288523 fastq.gz 593.7 MB
EGAF00003288524 fastq.gz 488.7 MB
EGAF00003288525 fastq.gz 537.5 MB
EGAF00003288526 fastq.gz 966.4 MB
EGAF00003288527 fastq.gz 976.2 MB
EGAF00003288528 fastq.gz 550.6 MB
EGAF00003288529 fastq.gz 575.7 MB
EGAF00003288530 fastq.gz 862.7 MB
EGAF00003288531 fastq.gz 864.2 MB
EGAF00003288532 fastq.gz 904.5 MB
EGAF00003288533 fastq.gz 1.0 GB
EGAF00003288534 fastq.gz 487.9 MB
EGAF00003288535 fastq.gz 544.1 MB
EGAF00003288536 fastq.gz 563.4 MB
EGAF00003288537 fastq.gz 502.1 MB
EGAF00003288538 fastq.gz 515.9 MB
EGAF00003288539 fastq.gz 565.1 MB
EGAF00003288540 fastq.gz 679.3 MB
EGAF00003288541 fastq.gz 705.7 MB
EGAF00003288542 fastq.gz 742.1 MB
EGAF00003288543 fastq.gz 744.1 MB
EGAF00003288544 fastq.gz 862.5 MB
EGAF00003288545 fastq.gz 864.0 MB
EGAF00003288546 fastq.gz 938.4 MB
EGAF00003288547 fastq.gz 940.4 MB
EGAF00003288548 fastq.gz 910.5 MB
EGAF00003288549 fastq.gz 927.7 MB
EGAF00003288573 fastq.gz 847.6 MB
EGAF00003288574 fastq.gz 855.4 MB
EGAF00003288575 fastq.gz 841.3 MB
EGAF00003288576 fastq.gz 844.0 MB
EGAF00003288577 fastq.gz 855.3 MB
EGAF00003288578 fastq.gz 857.3 MB
EGAF00003288579 fastq.gz 809.5 MB
EGAF00003288580 fastq.gz 816.6 MB
EGAF00003288581 fastq.gz 842.8 MB
EGAF00003288582 fastq.gz 872.9 MB
EGAF00003288583 fastq.gz 922.7 MB
EGAF00003288584 fastq.gz 935.8 MB
EGAF00003288585 fastq.gz 728.4 MB
EGAF00003288586 fastq.gz 742.4 MB
EGAF00003288587 fastq.gz 794.9 MB
EGAF00003288588 fastq.gz 806.6 MB
EGAF00003288589 fastq.gz 812.2 MB
EGAF00003288590 fastq.gz 823.9 MB
EGAF00003288591 fastq.gz 917.4 MB
EGAF00003288592 fastq.gz 933.8 MB
EGAF00003288593 fastq.gz 651.5 MB
EGAF00003288594 fastq.gz 655.7 MB
EGAF00003288595 fastq.gz 929.2 MB
EGAF00003288596 fastq.gz 946.0 MB
EGAF00003288597 fastq.gz 810.1 MB
EGAF00003288598 fastq.gz 869.9 MB
EGAF00003288599 fastq.gz 809.0 MB
EGAF00003288600 fastq.gz 820.6 MB
EGAF00003288601 fastq.gz 808.9 MB
EGAF00003288602 fastq.gz 811.6 MB
EGAF00003288603 fastq.gz 815.3 MB
EGAF00003288604 fastq.gz 820.1 MB
EGAF00003288633 fastq.gz 842.0 MB
EGAF00003288634 fastq.gz 847.6 MB
EGAF00003288635 fastq.gz 515.0 MB
EGAF00003288636 fastq.gz 570.2 MB
EGAF00003288637 fastq.gz 829.1 MB
EGAF00003288638 fastq.gz 836.4 MB
EGAF00003288639 fastq.gz 965.8 MB
EGAF00003288640 fastq.gz 973.3 MB
EGAF00003288641 fastq.gz 720.2 MB
EGAF00003288642 fastq.gz 730.6 MB
EGAF00003288643 fastq.gz 695.0 MB
EGAF00003288644 fastq.gz 705.9 MB
EGAF00003288645 fastq.gz 875.5 MB
EGAF00003288646 fastq.gz 883.4 MB
EGAF00003288647 fastq.gz 931.4 MB
EGAF00003288648 fastq.gz 944.0 MB
EGAF00003288649 fastq.gz 884.1 MB
EGAF00003288650 fastq.gz 889.1 MB
EGAF00003288651 fastq.gz 791.4 MB
EGAF00003288652 fastq.gz 794.9 MB
EGAF00003288653 fastq.gz 811.5 MB
EGAF00003288654 fastq.gz 833.9 MB
EGAF00003288655 fastq.gz 802.5 MB
EGAF00003288656 fastq.gz 814.2 MB
EGAF00003288657 fastq.gz 530.4 MB
EGAF00003288658 fastq.gz 522.9 MB
EGAF00003288659 fastq.gz 587.0 MB
EGAF00003288660 fastq.gz 578.2 MB
EGAF00003288661 fastq.gz 551.1 MB
EGAF00003288662 fastq.gz 546.2 MB
EGAF00003288663 fastq.gz 603.1 MB
EGAF00003288664 fastq.gz 591.0 MB
EGAF00003288687 fastq.gz 794.6 MB
EGAF00003288688 fastq.gz 798.7 MB
EGAF00003288689 fastq.gz 835.0 MB
EGAF00003288690 fastq.gz 842.6 MB
EGAF00003288691 fastq.gz 581.0 MB
EGAF00003288692 fastq.gz 582.1 MB
EGAF00003288693 fastq.gz 793.4 MB
EGAF00003288694 fastq.gz 863.0 MB
EGAF00003288695 fastq.gz 542.3 MB
EGAF00003288696 fastq.gz 543.5 MB
EGAF00003288697 fastq.gz 796.7 MB
EGAF00003288698 fastq.gz 861.1 MB
EGAF00003288699 fastq.gz 585.5 MB
EGAF00003288700 fastq.gz 583.7 MB
EGAF00003288701 fastq.gz 774.0 MB
EGAF00003288702 fastq.gz 841.3 MB
EGAF00003288703 fastq.gz 817.1 MB
EGAF00003288704 fastq.gz 822.8 MB
EGAF00003288705 fastq.gz 824.4 MB
EGAF00003288706 fastq.gz 871.7 MB
EGAF00003288707 fastq.gz 841.1 MB
EGAF00003288708 fastq.gz 844.4 MB
EGAF00003288709 fastq.gz 843.5 MB
EGAF00003288710 fastq.gz 848.1 MB
EGAF00003288711 fastq.gz 881.6 MB
EGAF00003288712 fastq.gz 894.0 MB
EGAF00003288713 fastq.gz 728.0 MB
EGAF00003288714 fastq.gz 772.0 MB
EGAF00003288715 fastq.gz 928.8 MB
EGAF00003288716 fastq.gz 984.9 MB
EGAF00003288717 fastq.gz 796.2 MB
EGAF00003288718 fastq.gz 862.9 MB
EGAF00003288719 fastq.gz 621.0 MB
EGAF00003288720 fastq.gz 626.9 MB
EGAF00003288721 fastq.gz 671.0 MB
EGAF00003288722 fastq.gz 680.5 MB
EGAF00003288723 fastq.gz 824.2 MB
EGAF00003288724 fastq.gz 830.6 MB
EGAF00003288725 fastq.gz 853.7 MB
EGAF00003288726 fastq.gz 897.1 MB
EGAF00003288727 fastq.gz 826.6 MB
EGAF00003288728 fastq.gz 836.4 MB
EGAF00003288729 fastq.gz 496.1 MB
EGAF00003288730 fastq.gz 487.4 MB
EGAF00003288731 fastq.gz 543.2 MB
EGAF00003288732 fastq.gz 535.5 MB
EGAF00003288733 fastq.gz 595.4 MB
EGAF00003288734 fastq.gz 601.2 MB
EGAF00003288735 fastq.gz 580.7 MB
EGAF00003288736 fastq.gz 583.1 MB
EGAF00003288737 fastq.gz 628.1 MB
EGAF00003288738 fastq.gz 628.9 MB
EGAF00003288739 fastq.gz 612.0 MB
EGAF00003288740 fastq.gz 609.0 MB
EGAF00003288741 fastq.gz 643.2 MB
EGAF00003288742 fastq.gz 643.7 MB
EGAF00003288743 fastq.gz 660.9 MB
EGAF00003288744 fastq.gz 673.7 MB
EGAF00003288745 fastq.gz 611.3 MB
EGAF00003288746 fastq.gz 593.4 MB
EGAF00003288747 fastq.gz 613.8 MB
EGAF00003288748 fastq.gz 612.5 MB
EGAF00003288749 fastq.gz 615.6 MB
EGAF00003288750 fastq.gz 626.5 MB
EGAF00003288751 fastq.gz 581.4 MB
EGAF00003288752 fastq.gz 573.9 MB
EGAF00003288753 fastq.gz 656.4 MB
EGAF00003288754 fastq.gz 661.9 MB
EGAF00003288755 fastq.gz 806.1 MB
EGAF00003288756 fastq.gz 809.9 MB
EGAF00003288757 fastq.gz 385.4 MB
EGAF00003288758 fastq.gz 412.2 MB
EGAF00003288937 fastq.gz 844.9 MB
EGAF00003288938 fastq.gz 847.1 MB
EGAF00003288962 fastq.gz 951.8 MB
EGAF00003288963 fastq.gz 959.5 MB
EGAF00003288964 fastq.gz 841.7 MB
EGAF00003288965 fastq.gz 842.1 MB
EGAF00003288966 fastq.gz 710.0 MB
EGAF00003288967 fastq.gz 712.0 MB
EGAF00003288968 fastq.gz 956.3 MB
EGAF00003288969 fastq.gz 968.1 MB
EGAF00003288970 fastq.gz 896.8 MB
EGAF00003288971 fastq.gz 909.8 MB
EGAF00003288972 fastq.gz 899.9 MB
EGAF00003288973 fastq.gz 915.4 MB
EGAF00003288974 fastq.gz 1.5 GB
EGAF00003288975 fastq.gz 1.6 GB
EGAF00003288976 fastq.gz 795.1 MB
EGAF00003288977 fastq.gz 791.6 MB
EGAF00003288978 fastq.gz 828.8 MB
EGAF00003288979 fastq.gz 828.9 MB
EGAF00003288980 fastq.gz 843.3 MB
EGAF00003288981 fastq.gz 845.6 MB
EGAF00003288982 fastq.gz 820.1 MB
EGAF00003288983 fastq.gz 833.4 MB
EGAF00003288984 fastq.gz 832.8 MB
EGAF00003288985 fastq.gz 840.2 MB
EGAF00003288986 fastq.gz 733.2 MB
EGAF00003288987 fastq.gz 739.3 MB
EGAF00003288988 fastq.gz 792.4 MB
EGAF00003288989 fastq.gz 809.6 MB
EGAF00003288990 fastq.gz 781.1 MB
EGAF00003288991 fastq.gz 805.4 MB
EGAF00003288992 fastq.gz 811.9 MB
EGAF00003288993 fastq.gz 823.5 MB
EGAF00003289017 fastq.gz 840.7 MB
EGAF00003289018 fastq.gz 843.6 MB
EGAF00003289019 fastq.gz 854.1 MB
EGAF00003289020 fastq.gz 854.9 MB
EGAF00003289021 fastq.gz 852.4 MB
EGAF00003289022 fastq.gz 903.5 MB
EGAF00003289023 fastq.gz 954.2 MB
EGAF00003289024 fastq.gz 950.1 MB
EGAF00003289025 fastq.gz 909.9 MB
EGAF00003289026 fastq.gz 908.4 MB
EGAF00003289027 fastq.gz 848.0 MB
EGAF00003289028 fastq.gz 853.2 MB
EGAF00003289029 fastq.gz 898.5 MB
EGAF00003289030 fastq.gz 912.2 MB
EGAF00003289031 fastq.gz 942.1 MB
EGAF00003289032 fastq.gz 953.8 MB
EGAF00003289033 fastq.gz 795.3 MB
EGAF00003289034 fastq.gz 798.3 MB
EGAF00003289035 fastq.gz 894.3 MB
EGAF00003289036 fastq.gz 899.6 MB
EGAF00003289037 fastq.gz 778.5 MB
EGAF00003289038 fastq.gz 782.5 MB
EGAF00003289039 fastq.gz 832.8 MB
EGAF00003289040 fastq.gz 832.4 MB
EGAF00003289041 fastq.gz 869.7 MB
EGAF00003289042 fastq.gz 895.0 MB
EGAF00003289043 fastq.gz 848.6 MB
EGAF00003289044 fastq.gz 857.8 MB
EGAF00003289045 fastq.gz 832.2 MB
EGAF00003289046 fastq.gz 837.1 MB
EGAF00003289047 fastq.gz 742.9 MB
EGAF00003289048 fastq.gz 849.2 MB
234 Files (182.5 GB)