Anaplastic Thyroid Cancer aligned whole exome sequence data
Whole exome sequence data in fastq format was aligned to the GRCH38 reference genome. Aligned sequence was preprocessed with GATK for Indel Realignment and Base Quality Score Recalibration. Duplicates were marked with Picard Mark Duplicates. Aligned sequence is in bam format. Details of the alignment can be found in he bam header. Tumour samples were classified as Anaplastic Thyroid, Poorly-differentiated or well-differentiated cancers.
- DAC: EGAC00001002164
Data Access Agreement for the Nichols Group
Data will be available to qualified investigators upon request.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002007909 | bam | 25.1 GB | ||
| EGAF00002007910 | bam | 11.9 GB | ||
| EGAF00002007911 | bam | 21.9 GB | ||
| EGAF00002007912 | bam | 14.4 GB | ||
| EGAF00002007913 | bam | 28.2 GB | ||
| EGAF00002007914 | bam | 16.6 GB | ||
| EGAF00002007915 | bam | 15.7 GB | ||
| EGAF00002007916 | bam | 13.6 GB | ||
| EGAF00002007917 | bam | 16.5 GB | ||
| EGAF00002007918 | bam | 14.7 GB | ||
| EGAF00002007919 | bam | 16.7 GB | ||
| EGAF00002007920 | bam | 15.9 GB | ||
| EGAF00002007921 | bam | 15.6 GB | ||
| EGAF00002007922 | bam | 19.3 GB | ||
| EGAF00002007923 | bam | 14.3 GB | ||
| EGAF00002007924 | bam | 17.0 GB | ||
| EGAF00002007925 | bam | 18.1 GB | ||
| EGAF00002007926 | bam | 12.3 GB | ||
| EGAF00002007927 | bam | 20.2 GB | ||
| EGAF00002007928 | bam | 22.8 GB | ||
| EGAF00002007929 | bam | 15.3 GB | ||
| EGAF00002007930 | bam | 15.7 GB | ||
| EGAF00002007931 | bam | 17.0 GB | ||
| EGAF00002007932 | bam | 19.3 GB | ||
| EGAF00002007933 | bam | 15.8 GB | ||
| EGAF00002007934 | bam | 16.5 GB | ||
| EGAF00002007935 | bam | 19.9 GB | ||
| EGAF00002007936 | bam | 18.5 GB | ||
| EGAF00002007937 | bam | 14.2 GB | ||
| EGAF00002007938 | bam | 16.5 GB | ||
| EGAF00002007939 | bam | 16.1 GB | ||
| EGAF00002007940 | bam | 15.5 GB | ||
| EGAF00002007941 | bam | 17.1 GB | ||
| EGAF00002007942 | bam | 15.3 GB | ||
| EGAF00002007943 | bam | 20.9 GB | ||
| EGAF00002007944 | bam | 17.1 GB | ||
| EGAF00002007945 | bam | 18.4 GB | ||
| EGAF00002007946 | bam | 15.1 GB | ||
| EGAF00002007947 | bam | 10.5 GB | ||
| EGAF00002007948 | bam | 10.1 GB | ||
| EGAF00002007949 | bam | 10.5 GB | ||
| EGAF00002007950 | bam | 12.9 GB | ||
| EGAF00002007951 | bam | 10.8 GB | ||
| EGAF00002007954 | bam | 13.3 GB | ||
| EGAF00002007955 | bam | 9.8 GB | ||
| EGAF00002007956 | bam | 12.4 GB | ||
| EGAF00002007957 | bam | 16.8 GB | ||
| EGAF00002007958 | bam | 16.0 GB | ||
| EGAF00002007959 | bam | 12.6 GB | ||
| EGAF00002007960 | bam | 12.6 GB | ||
| EGAF00002007961 | bam | 12.9 GB | ||
| EGAF00002007962 | bam | 13.6 GB | ||
| EGAF00002007963 | bam | 13.6 GB | ||
| EGAF00002007964 | bam | 12.7 GB | ||
| EGAF00002007965 | bam | 12.4 GB | ||
| EGAF00002007966 | bam | 12.7 GB | ||
| EGAF00002007967 | bam | 12.8 GB | ||
| EGAF00002007968 | bam | 13.2 GB | ||
| EGAF00002007969 | bam | 12.4 GB | ||
| EGAF00002007970 | bam | 13.6 GB | ||
| EGAF00002007971 | bam | 15.3 GB | ||
| EGAF00002007972 | bam | 15.5 GB | ||
| EGAF00002007973 | bam | 15.1 GB | ||
| EGAF00002007974 | bam | 14.6 GB | ||
| EGAF00002007975 | bam | 16.4 GB | ||
| EGAF00002007976 | bam | 13.7 GB | ||
| EGAF00002007977 | bam | 14.9 GB | ||
| EGAF00002007978 | bam | 14.1 GB | ||
| EGAF00002007979 | bam | 15.4 GB | ||
| EGAF00002007980 | bam | 12.8 GB | ||
| EGAF00002007981 | bam | 15.2 GB | ||
| EGAF00002007982 | bam | 11.6 GB | ||
| EGAF00002007983 | bam | 11.5 GB | ||
| EGAF00002007984 | bam | 12.2 GB | ||
| EGAF00002007985 | bam | 14.0 GB | ||
| EGAF00002007986 | bam | 14.0 GB | ||
| EGAF00002007987 | bam | 12.4 GB | ||
| EGAF00002007988 | bam | 13.7 GB | ||
| EGAF00002007989 | bam | 13.2 GB | ||
| EGAF00002007990 | bam | 13.4 GB | ||
| EGAF00002007991 | bam | 9.9 GB | ||
| EGAF00002007992 | bam | 4.4 GB | ||
| EGAF00002007993 | bam | 4.2 GB | ||
| EGAF00002007994 | bam | 7.8 GB | ||
| EGAF00002007995 | bam | 7.5 GB | ||
| EGAF00002007996 | bam | 12.5 GB | ||
| EGAF00002007997 | bam | 14.6 GB | ||
| EGAF00002007998 | bam | 8.6 GB | ||
| EGAF00002007999 | bam | 13.4 GB | ||
| EGAF00002008000 | bam | 8.5 GB | ||
| EGAF00002008001 | bam | 4.8 GB | ||
| EGAF00002008002 | bam | 17.0 GB | ||
| EGAF00002008003 | bam | 15.5 GB | ||
| EGAF00002008004 | bam | 13.6 GB | ||
| EGAF00002008005 | bam | 14.7 GB | ||
| EGAF00002008006 | bam | 13.9 GB | ||
| EGAF00002008007 | bam | 12.4 GB | ||
| EGAF00002008008 | bam | 12.2 GB | ||
| EGAF00002008009 | bam | 11.1 GB | ||
| EGAF00002008010 | bam | 11.8 GB | ||
| EGAF00002008011 | bam | 11.4 GB | ||
| EGAF00002008012 | bam | 13.2 GB | ||
| EGAF00002008013 | bam | 13.3 GB | ||
| EGAF00002008014 | bam | 12.8 GB | ||
| EGAF00002008015 | bam | 12.4 GB | ||
| EGAF00002008016 | bam | 14.8 GB | ||
| EGAF00002008017 | bam | 10.3 GB | ||
| EGAF00002008018 | bam | 15.3 GB | ||
| EGAF00002008019 | bam | 16.1 GB | ||
| EGAF00002008020 | bam | 17.7 GB | ||
| EGAF00002008021 | bam | 17.4 GB | ||
| EGAF00002008022 | bam | 23.1 GB | ||
| EGAF00002008023 | bam | 23.2 GB | ||
| EGAF00002008024 | bam | 21.2 GB | ||
| EGAF00002008025 | bam | 22.4 GB | ||
| EGAF00002008026 | bam | 23.2 GB | ||
| EGAF00002008027 | bam | 16.4 GB | ||
| EGAF00002008028 | bam | 17.3 GB | ||
| EGAF00002008029 | bam | 17.3 GB | ||
| EGAF00002008030 | bam | 20.0 GB | ||
| EGAF00002008031 | bam | 15.2 GB | ||
| EGAF00002008032 | bam | 13.6 GB | ||
| EGAF00002008033 | bam | 13.5 GB | ||
| EGAF00002008034 | bam | 14.1 GB | ||
| EGAF00002008035 | bam | 12.6 GB | ||
| EGAF00002008036 | bam | 12.7 GB | ||
| EGAF00002008037 | bam | 11.5 GB | ||
| EGAF00002008038 | bam | 13.6 GB | ||
| EGAF00002008039 | bam | 11.5 GB | ||
| EGAF00002008040 | bam | 14.2 GB | ||
| EGAF00002008041 | bam | 13.7 GB | ||
| EGAF00002008042 | bam | 12.0 GB | ||
| EGAF00002008043 | bam | 12.1 GB | ||
| EGAF00002008044 | bam | 12.3 GB | ||
| EGAF00002008045 | bam | 16.8 GB | ||
| EGAF00002008046 | bam | 17.0 GB | ||
| EGAF00002008047 | bam | 16.6 GB | ||
| EGAF00002008048 | bam | 17.2 GB | ||
| EGAF00002008049 | bam | 23.8 GB | ||
| EGAF00002008050 | bam | 21.4 GB | ||
| EGAF00002008051 | bam | 22.3 GB | ||
| EGAF00002008052 | bam | 18.7 GB | ||
| EGAF00002008053 | bam | 19.2 GB | ||
| EGAF00002008054 | bam | 17.4 GB | ||
| EGAF00002008055 | bam | 19.3 GB | ||
| EGAF00002008056 | bam | 15.9 GB | ||
| EGAF00002008057 | bam | 17.9 GB | ||
| EGAF00002008058 | bam | 17.2 GB | ||
| EGAF00002008059 | bam | 11.9 GB | ||
| EGAF00002008060 | bam | 15.3 GB | ||
| EGAF00002008061 | bam | 11.5 GB | ||
| EGAF00002008062 | bam | 17.0 GB | ||
| EGAF00002008063 | bam | 14.6 GB | ||
| EGAF00002008064 | bam | 15.1 GB | ||
| EGAF00002008065 | bam | 14.5 GB | ||
| EGAF00002008066 | bam | 13.8 GB | ||
| EGAF00002008067 | bam | 12.6 GB | ||
| EGAF00002008068 | bam | 15.9 GB | ||
| EGAF00002008069 | bam | 14.8 GB | ||
| EGAF00002008070 | bam | 14.2 GB | ||
| EGAF00002008071 | bam | 14.0 GB | ||
| EGAF00002008072 | bam | 13.1 GB | ||
| EGAF00002008073 | bam | 19.6 GB | ||
| EGAF00002008074 | bam | 19.6 GB | ||
| EGAF00002008075 | bam | 24.9 GB | ||
| EGAF00002008076 | bam | 18.4 GB | ||
| EGAF00002008077 | bam | 17.1 GB | ||
| EGAF00002008078 | bam | 20.8 GB | ||
| EGAF00002008079 | bam | 21.1 GB | ||
| EGAF00002008080 | bam | 22.5 GB | ||
| EGAF00002008081 | bam | 23.4 GB | ||
| EGAF00002008082 | bam | 19.0 GB | ||
| EGAF00002008083 | bam | 19.9 GB | ||
| EGAF00002008084 | bam | 36.6 GB | ||
| EGAF00002008085 | bam | 22.4 GB | ||
| EGAF00002008086 | bam | 10.1 GB | ||
| EGAF00002008087 | bam | 15.8 GB | ||
| EGAF00002008088 | bam | 15.2 GB | ||
| EGAF00002008089 | bam | 15.1 GB | ||
| EGAF00002008090 | bam | 12.8 GB | ||
| EGAF00002008091 | bam | 15.9 GB | ||
| EGAF00002008092 | bam | 14.3 GB | ||
| EGAF00002008093 | bam | 13.8 GB | ||
| EGAF00002008094 | bam | 13.6 GB | ||
| EGAF00002008095 | bam | 14.5 GB | ||
| EGAF00002008096 | bam | 14.9 GB | ||
| EGAF00002008097 | bam | 12.6 GB | ||
| EGAF00002008098 | bam | 12.7 GB | ||
| EGAF00002008099 | bam | 12.2 GB | ||
| EGAF00002008100 | bam | 12.0 GB | ||
| EGAF00002008101 | bam | 13.4 GB | ||
| EGAF00002008102 | bam | 17.5 GB | ||
| EGAF00002008103 | bam | 16.7 GB | ||
| EGAF00002008104 | bam | 16.4 GB | ||
| EGAF00002008105 | bam | 12.8 GB | ||
| EGAF00002008106 | bam | 14.5 GB | ||
| EGAF00002008107 | bam | 18.7 GB | ||
| EGAF00002008108 | bam | 17.0 GB | ||
| EGAF00002008109 | bam | 11.5 GB | ||
| EGAF00002008110 | bam | 18.4 GB | ||
| EGAF00002008111 | bam | 17.4 GB | ||
| EGAF00002008112 | bam | 20.4 GB | ||
| EGAF00002008113 | bam | 17.4 GB | ||
| EGAF00002008114 | bam | 10.2 GB | ||
| EGAF00002008115 | bam | 12.8 GB | ||
| EGAF00002008116 | bam | 12.2 GB | ||
| EGAF00002008117 | bam | 16.2 GB | ||
| EGAF00002008118 | bam | 15.2 GB | ||
| EGAF00002008119 | bam | 10.4 GB | ||
| EGAF00002008120 | bam | 9.8 GB | ||
| EGAF00002008121 | bam | 10.4 GB | ||
| EGAF00002008122 | bam | 10.1 GB | ||
| EGAF00002008123 | bam | 9.5 GB | ||
| EGAF00002008124 | bam | 10.6 GB | ||
| EGAF00002008125 | bam | 9.3 GB | ||
| EGAF00002008126 | bam | 33.7 GB | ||
| EGAF00002008127 | bam | 19.2 GB | ||
| EGAF00002008128 | bam | 35.6 GB | ||
| EGAF00002008129 | bam | 21.7 GB | ||
| EGAF00002008130 | bam | 40.5 GB | ||
| EGAF00002008131 | bam | 18.1 GB | ||
| EGAF00002008132 | bam | 36.4 GB | ||
| EGAF00002008133 | bam | 20.9 GB | ||
| EGAF00002008134 | bam | 29.2 GB | ||
| EGAF00002008135 | bam | 19.3 GB | ||
| EGAF00002008136 | bam | 33.1 GB | ||
| EGAF00002008137 | bam | 20.2 GB | ||
| EGAF00002008138 | bam | 34.6 GB | ||
| EGAF00002008139 | bam | 18.8 GB | ||
| EGAF00002008140 | bam | 38.9 GB | ||
| EGAF00002008141 | bam | 13.6 GB | ||
| EGAF00002008142 | bam | 36.5 GB | ||
| EGAF00002008143 | bam | 13.3 GB | ||
| EGAF00002008144 | bam | 41.2 GB | ||
| EGAF00002008145 | bam | 12.8 GB | ||
| EGAF00002008146 | bam | 54.7 GB | ||
| EGAF00002008147 | bam | 10.6 GB | ||
| EGAF00002008148 | bam | 33.0 GB | ||
| EGAF00002008149 | bam | 16.3 GB | ||
| EGAF00002008150 | bam | 35.4 GB | ||
| EGAF00002008151 | bam | 13.1 GB | ||
| EGAF00002008152 | bam | 46.8 GB | ||
| EGAF00002008153 | bam | 19.6 GB | ||
| EGAF00002008154 | bam | 48.1 GB | ||
| EGAF00002008155 | bam | 18.0 GB | ||
| EGAF00002008156 | bam | 41.7 GB | ||
| EGAF00002008157 | bam | 22.5 GB | ||
| EGAF00002008158 | bam | 45.5 GB | ||
| EGAF00002008159 | bam | 27.4 GB | ||
| EGAF00002008160 | bam | 35.2 GB | ||
| EGAF00002008161 | bam | 13.9 GB | ||
| EGAF00002008162 | bam | 30.4 GB | ||
| EGAF00002008163 | bam | 12.3 GB | ||
| EGAF00002008164 | bam | 49.2 GB | ||
| EGAF00002008165 | bam | 15.6 GB | ||
| EGAF00002008166 | bam | 41.9 GB | ||
| EGAF00002008167 | bam | 14.6 GB | ||
| EGAF00002008168 | bam | 19.0 GB | ||
| EGAF00002008169 | bam | 14.0 GB | ||
| EGAF00002008170 | bam | 19.8 GB | ||
| EGAF00002008171 | bam | 26.3 GB | ||
| EGAF00002008172 | bam | 17.1 GB | ||
| EGAF00002008173 | bam | 22.3 GB | ||
| EGAF00002008174 | bam | 14.3 GB | ||
| EGAF00002008175 | bam | 19.9 GB | ||
| EGAF00002008176 | bam | 11.5 GB | ||
| EGAF00002008177 | bam | 16.6 GB | ||
| EGAF00002008178 | bam | 21.5 GB | ||
| EGAF00002008179 | bam | 26.6 GB | ||
| EGAF00002008180 | bam | 32.0 GB | ||
| EGAF00002008181 | bam | 17.8 GB | ||
| EGAF00002008182 | bam | 27.9 GB | ||
| EGAF00002008183 | bam | 32.1 GB | ||
| EGAF00003091575 | bam | 11.0 GB | ||
| EGAF00003091576 | bam | 10.4 GB | ||
| 275 Files (4.8 TB) | ||||