Colon Cancer Organoid Cultures and Tumors Whole Exome Sequencing Data
Five hundred fifty nanograms of genomic DNA were input for library preparation after fragmentation by Covaris S2, following the KAPA Hyper Prep Kit (KR0961-V1.14) protocols, with selection for a library size range of 250-450 bp. Three hundred nanograms per library DNA each from 12 samples were normalized and combined into a single pool for exome capture using the xGen Lockdown Probes and Reagents based on their standard protocols
- 117 samples
- DAC: EGAC00001001405
- Technologies: HiSeq X Ten, Illumina HiSeq 1500, Illumina NovaSeq 6000
HKU Colon Cancer Organoids Genomics Study - PI Prof. Suet Yi Leung
Policy.doc
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004063 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00003091293 | bam | 4.8 GB | ||
| EGAF00003091294 | bam | 4.8 GB | ||
| EGAF00003091295 | bam | 5.4 GB | ||
| EGAF00003091296 | bam | 4.8 GB | ||
| EGAF00003091297 | bam | 5.0 GB | ||
| EGAF00003091298 | bam | 4.9 GB | ||
| EGAF00003091299 | bam | 4.8 GB | ||
| EGAF00003091300 | bam | 4.7 GB | ||
| EGAF00003091301 | bam | 4.9 GB | ||
| EGAF00003091302 | bam | 4.8 GB | ||
| EGAF00003091303 | bam | 5.8 GB | ||
| EGAF00003091304 | bam | 4.5 GB | ||
| EGAF00003091305 | bam | 4.6 GB | ||
| EGAF00003091306 | bam | 4.9 GB | ||
| EGAF00003091307 | bam | 5.8 GB | ||
| EGAF00003091308 | bam | 4.6 GB | ||
| EGAF00003091309 | bam | 5.2 GB | ||
| EGAF00003091310 | bam | 5.6 GB | ||
| EGAF00003091311 | bam | 5.7 GB | ||
| EGAF00003091312 | bam | 6.1 GB | ||
| EGAF00003091313 | bam | 8.0 GB | ||
| EGAF00003091314 | bam | 15.6 GB | ||
| EGAF00003091315 | bam | 6.0 GB | ||
| EGAF00003091316 | bam | 5.8 GB | ||
| EGAF00003091317 | bam | 8.8 GB | ||
| EGAF00003091318 | bam | 5.6 GB | ||
| EGAF00003091319 | bam | 6.0 GB | ||
| EGAF00003091320 | bam | 8.5 GB | ||
| EGAF00003091321 | bam | 5.6 GB | ||
| EGAF00003091322 | bam | 6.5 GB | ||
| EGAF00003091323 | bam | 5.5 GB | ||
| EGAF00003091324 | bam | 9.2 GB | ||
| EGAF00003091325 | bam | 5.5 GB | ||
| EGAF00003091326 | bam | 5.7 GB | ||
| EGAF00003091327 | bam | 5.9 GB | ||
| EGAF00003091328 | bam | 6.2 GB | ||
| EGAF00003091329 | bam | 4.6 GB | ||
| EGAF00003091330 | bam | 10.2 GB | ||
| EGAF00003091331 | bam | 5.2 GB | ||
| EGAF00003091332 | bam | 4.9 GB | ||
| EGAF00003091333 | bam | 6.2 GB | ||
| EGAF00003091334 | bam | 4.8 GB | ||
| EGAF00003091335 | bam | 11.7 GB | ||
| EGAF00003091336 | bam | 5.5 GB | ||
| EGAF00003091337 | bam | 9.5 GB | ||
| EGAF00003091338 | bam | 5.5 GB | ||
| EGAF00003091339 | bam | 5.4 GB | ||
| EGAF00003091340 | bam | 6.0 GB | ||
| EGAF00003091341 | bam | 5.2 GB | ||
| EGAF00003091342 | bam | 10.7 GB | ||
| EGAF00003091343 | bam | 5.4 GB | ||
| EGAF00003091344 | bam | 5.2 GB | ||
| EGAF00003091345 | bam | 5.5 GB | ||
| EGAF00003091346 | bam | 5.3 GB | ||
| EGAF00003091347 | bam | 7.1 GB | ||
| EGAF00003091348 | bam | 4.8 GB | ||
| EGAF00003091349 | bam | 10.3 GB | ||
| EGAF00003091350 | bam | 4.9 GB | ||
| EGAF00003091351 | bam | 5.1 GB | ||
| EGAF00003091352 | bam | 11.5 GB | ||
| EGAF00003091353 | bam | 5.5 GB | ||
| EGAF00003091354 | bam | 5.9 GB | ||
| EGAF00003091355 | bam | 4.9 GB | ||
| EGAF00003091356 | bam | 9.8 GB | ||
| EGAF00003091357 | bam | 4.9 GB | ||
| EGAF00003091358 | bam | 5.1 GB | ||
| EGAF00003091359 | bam | 6.4 GB | ||
| EGAF00003091360 | bam | 5.1 GB | ||
| EGAF00003091361 | bam | 9.6 GB | ||
| EGAF00003091362 | bam | 5.2 GB | ||
| EGAF00003091363 | bam | 5.3 GB | ||
| EGAF00003091364 | bam | 5.5 GB | ||
| EGAF00003091365 | bam | 5.5 GB | ||
| EGAF00003091366 | bam | 5.3 GB | ||
| EGAF00003091367 | bam | 9.9 GB | ||
| EGAF00003091368 | bam | 5.5 GB | ||
| EGAF00003091369 | bam | 5.3 GB | ||
| EGAF00003091370 | bam | 7.1 GB | ||
| EGAF00003091371 | bam | 5.4 GB | ||
| EGAF00003091372 | bam | 10.1 GB | ||
| EGAF00003091373 | bam | 5.2 GB | ||
| EGAF00003091374 | bam | 10.8 GB | ||
| EGAF00003091375 | bam | 5.5 GB | ||
| EGAF00003091376 | bam | 5.0 GB | ||
| EGAF00003091377 | bam | 10.0 GB | ||
| EGAF00003091378 | bam | 4.5 GB | ||
| EGAF00003091379 | bam | 5.1 GB | ||
| EGAF00003091380 | bam | 11.4 GB | ||
| EGAF00003091381 | bam | 4.6 GB | ||
| EGAF00003091382 | bam | 6.0 GB | ||
| EGAF00003091383 | bam | 5.7 GB | ||
| EGAF00003091384 | bam | 8.4 GB | ||
| EGAF00003091385 | bam | 5.3 GB | ||
| EGAF00003091386 | bam | 11.3 GB | ||
| EGAF00003091387 | bam | 6.1 GB | ||
| EGAF00003091388 | bam | 5.3 GB | ||
| EGAF00003091389 | bam | 10.9 GB | ||
| EGAF00003091390 | bam | 5.5 GB | ||
| EGAF00003091391 | bam | 10.4 GB | ||
| EGAF00003091392 | bam | 10.4 GB | ||
| EGAF00003091393 | bam | 5.6 GB | ||
| EGAF00003091394 | bam | 11.6 GB | ||
| EGAF00003091395 | bam | 5.6 GB | ||
| EGAF00003091396 | bam | 10.0 GB | ||
| EGAF00003091397 | bam | 10.7 GB | ||
| EGAF00003091398 | bam | 12.1 GB | ||
| EGAF00003091399 | bam | 10.5 GB | ||
| EGAF00003091400 | bam | 5.4 GB | ||
| EGAF00003091401 | bam | 10.7 GB | ||
| EGAF00003091402 | bam | 5.8 GB | ||
| EGAF00003091403 | bam | 9.4 GB | ||
| EGAF00003091404 | bam | 9.8 GB | ||
| EGAF00003091405 | bam | 5.6 GB | ||
| EGAF00003091406 | bam | 12.1 GB | ||
| EGAF00003091407 | bam | 5.6 GB | ||
| EGAF00003091408 | bam | 7.6 GB | ||
| EGAF00003091409 | bam | 15.6 GB | ||
| 117 Files (805.1 GB) | ||||