DESIGN II HNSCC RNA-Seq
RNA-Seq data of 28 HPV-negative HNSCC specimens from patients treated at the Netherlands Cancer Institute (Amsterdam), VU Medical Centre (Amsterdam) or MAASTRO Clinic (Maastricht) in The Netherlands. HNSCC biopsy samples were obtained prior to treatment (chemo-radiotherapy) for the prospective study within the DESIGN project and used for polyA mRNA sequencing.
- 28 samples
- DAC: EGAC00001001422
- Technology: Illumina HiSeq 2000
DESIGN-NKI Policy
To request access to this dataset, please contact the Data Access Committee HNSCC_DAC_DESIGN. Data Access Requests for this dataset should include the following information: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and EGA Dataset Accession Number(s) - Study objective and brief abstract of the project in which the data will be used (500 words) - List of individuals who will be allowed access to the requested datasets by the Recipient and/or Recipient Institution - Policy name (DESIGN-NKI) assigned to this dataset Data Access Request for this dataset will be reviewed by the Data Access Committee HNSCC_DAC_DESIGN. After receipt and review by the Data Access Committee, a Data Transfer Agreement will have to be completed, signed and returned to the HNSCC_DAC_DESIGN Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the HNSCC_DAC_DESIGN Data Access Committee reserves the right to withhold granting access.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00003029844 | fastq.gz | 1.0 GB | ||
| EGAF00003029846 | fastq.gz | 967.8 MB | ||
| EGAF00003029849 | fastq.gz | 1.1 GB | ||
| EGAF00003029850 | fastq.gz | 1.1 GB | ||
| EGAF00003029853 | fastq.gz | 1.2 GB | ||
| EGAF00003029855 | fastq.gz | 1.0 GB | ||
| EGAF00003029857 | fastq.gz | 1.1 GB | ||
| EGAF00003029858 | fastq.gz | 1.0 GB | ||
| EGAF00003029861 | fastq.gz | 1.2 GB | ||
| EGAF00003029862 | fastq.gz | 1.2 GB | ||
| EGAF00003029865 | fastq.gz | 774.1 MB | ||
| EGAF00003029866 | fastq.gz | 886.6 MB | ||
| EGAF00003029869 | fastq.gz | 1.1 GB | ||
| EGAF00003029871 | fastq.gz | 996.2 MB | ||
| EGAF00003029873 | fastq.gz | 965.7 MB | ||
| EGAF00003029875 | fastq.gz | 1.1 GB | ||
| EGAF00003029881 | fastq.gz | 1.2 GB | ||
| EGAF00003029887 | fastq.gz | 1.3 GB | ||
| EGAF00003029889 | fastq.gz | 1.1 GB | ||
| EGAF00003029891 | fastq.gz | 1.4 GB | ||
| EGAF00003029893 | fastq.gz | 1.5 GB | ||
| EGAF00003029895 | fastq.gz | 1.5 GB | ||
| EGAF00003029897 | fastq.gz | 1.4 GB | ||
| EGAF00003029899 | fastq.gz | 1.5 GB | ||
| EGAF00003029901 | fastq.gz | 1.5 GB | ||
| EGAF00003029903 | fastq.gz | 1.6 GB | ||
| EGAF00003029904 | fastq.gz | 1.3 GB | ||
| EGAF00003029906 | fastq.gz | 1.3 GB | ||
| 28 Files (33.2 GB) | ||||