ART-NKI II HNSCC RNA-Seq
RNA-Seq data of 25 HNSCC specimens from patients treated at The Netherlands Cancer Institute, Amsterdam and enrolled in the ARTFORCE trial. HNSCC biopsy samples obtained prior to treatment (chemo-radiotherapy) were used for polyA mRNA sequencing.
- 25 samples
- DAC: EGAC00001001422
- Technology: Illumina HiSeq 2000
DESIGN-NKI Policy
To request access to this dataset, please contact the Data Access Committee HNSCC_DAC_DESIGN. Data Access Requests for this dataset should include the following information: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and EGA Dataset Accession Number(s) - Study objective and brief abstract of the project in which the data will be used (500 words) - List of individuals who will be allowed access to the requested datasets by the Recipient and/or Recipient Institution - Policy name (DESIGN-NKI) assigned to this dataset Data Access Request for this dataset will be reviewed by the Data Access Committee HNSCC_DAC_DESIGN. After receipt and review by the Data Access Committee, a Data Transfer Agreement will have to be completed, signed and returned to the HNSCC_DAC_DESIGN Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the HNSCC_DAC_DESIGN Data Access Committee reserves the right to withhold granting access.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS00001004090 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00003029877 | fastq.gz | 1.1 GB | ||
EGAF00003029883 | fastq.gz | 1.0 GB | ||
EGAF00003029884 | bam | 740.8 MB | ||
EGAF00003029886 | bam | 689.3 MB | ||
EGAF00003029888 | bam | 656.3 MB | ||
EGAF00003029890 | bam | 818.2 MB | ||
EGAF00003029892 | bam | 736.9 MB | ||
EGAF00003029894 | bam | 713.6 MB | ||
EGAF00003029896 | bam | 723.4 MB | ||
EGAF00003029898 | bam | 644.5 MB | ||
EGAF00003029900 | bam | 716.1 MB | ||
EGAF00003029902 | bam | 665.3 MB | ||
EGAF00003029905 | bam | 686.2 MB | ||
EGAF00003029907 | bam | 846.3 MB | ||
EGAF00003029908 | bam | 821.1 MB | ||
EGAF00003029909 | bam | 768.4 MB | ||
EGAF00003029910 | bam | 620.0 MB | ||
EGAF00003029911 | bam | 712.6 MB | ||
EGAF00003029912 | bam | 687.0 MB | ||
EGAF00003029920 | bam | 670.5 MB | ||
EGAF00003029930 | bam | 723.2 MB | ||
EGAF00003029940 | bam | 720.2 MB | ||
EGAF00003029941 | bam | 684.1 MB | ||
EGAF00003029942 | bam | 663.3 MB | ||
EGAF00003029943 | bam | 713.4 MB | ||
25 Files (18.6 GB) |