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DESIGN-VUMC RNA-seq

RNA-Seq data of 55 HPV-negative HNSCC specimens from patients treated at the VU medical Centre, Amsterdam, The Netherlands. HNSCC biopsy samples obtained prior to treatment (chemo-radiotherapy) were used for polyA mRNA sequencing.

Request Access

DESIGN-VUMC Policy

To request access to this dataset, please contact the Data Access Committee HNSCC_DAC_DESIGN. Data Access Requests for this dataset should include the following information: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and EGA Dataset Accession Number(s) - Study objective and brief abstract of the project in which the data will be used (500 words) - List of individuals who will be allowed access to the requested datasets by the Recipient and/or Recipient Institution - Policy name (DESIGN-VUMC) assigned to this dataset Data Access Request for this dataset will be reviewed by the Data Access Committee HNSCC_DAC_DESIGN. After receipt and review by the Data Access Committee, a Data Transfer Agreement will have to be completed, signed and returned to the HNSCC_DAC_DESIGN Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the HNSCC_DAC_DESIGN Data Access Committee reserves the right to withhold granting access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003029818 bam 836.7 MB
EGAF00003029819 bam 784.9 MB
EGAF00003029820 bam 857.8 MB
EGAF00003029821 bam 1.1 GB
EGAF00003029822 bam 743.5 MB
EGAF00003029823 bam 889.9 MB
EGAF00003029824 bam 733.5 MB
EGAF00003029825 bam 907.3 MB
EGAF00003029826 bam 687.1 MB
EGAF00003029827 bam 700.6 MB
EGAF00003029828 bam 869.4 MB
EGAF00003029829 bam 877.9 MB
EGAF00003029830 bam 760.7 MB
EGAF00003029831 bam 816.5 MB
EGAF00003029832 bam 717.7 MB
EGAF00003029833 bam 860.6 MB
EGAF00003029834 bam 884.5 MB
EGAF00003029835 bam 845.2 MB
EGAF00003029836 bam 906.9 MB
EGAF00003029837 bam 798.3 MB
EGAF00003029838 bam 351.0 MB
EGAF00003029839 bam 900.3 MB
EGAF00003029840 bam 950.0 MB
EGAF00003029841 bam 900.9 MB
EGAF00003029842 bam 916.3 MB
EGAF00003029843 bam 601.3 MB
EGAF00003029845 bam 175.8 MB
EGAF00003029847 bam 248.9 MB
EGAF00003029848 bam 757.5 MB
EGAF00003029851 bam 617.8 MB
EGAF00003029852 bam 658.8 MB
EGAF00003029854 bam 743.5 MB
EGAF00003029856 bam 788.4 MB
EGAF00003029859 bam 761.5 MB
EGAF00003029860 bam 921.5 MB
EGAF00003029863 bam 646.7 MB
EGAF00003029864 bam 806.6 MB
EGAF00003029867 bam 730.3 MB
EGAF00003029868 bam 791.2 MB
EGAF00003029870 bam 663.2 MB
EGAF00003029872 bam 806.3 MB
EGAF00003029874 bam 903.7 MB
EGAF00003029876 bam 874.9 MB
EGAF00003029878 bam 955.5 MB
EGAF00003029880 bam 525.7 MB
EGAF00003029882 bam 880.5 MB
46 Files (35.4 GB)