DESIGN-NKI RNA-seq
RNA-Seq data of 36 HPV-negative HNSCC specimens from patients treated at The Netherlands Cancer Institute, Amsterdam. HNSCC biopsy samples obtained prior to treatment (chemo-radiotherapy) were used for polyA mRNA sequencing.
- 36 samples
- DAC: EGAC00001001422
- Technology: Illumina HiSeq 2000
DESIGN-NKI Policy
To request access to this dataset, please contact the Data Access Committee HNSCC_DAC_DESIGN. Data Access Requests for this dataset should include the following information: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and EGA Dataset Accession Number(s) - Study objective and brief abstract of the project in which the data will be used (500 words) - List of individuals who will be allowed access to the requested datasets by the Recipient and/or Recipient Institution - Policy name (DESIGN-NKI) assigned to this dataset Data Access Request for this dataset will be reviewed by the Data Access Committee HNSCC_DAC_DESIGN. After receipt and review by the Data Access Committee, a Data Transfer Agreement will have to be completed, signed and returned to the HNSCC_DAC_DESIGN Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the HNSCC_DAC_DESIGN Data Access Committee reserves the right to withhold granting access.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00003029765 | bam | 724.2 MB | ||
EGAF00003029766 | bam | 573.7 MB | ||
EGAF00003029767 | bam | 1.1 GB | ||
EGAF00003029768 | bam | 887.9 MB | ||
EGAF00003029773 | bam | 945.6 MB | ||
EGAF00003029774 | bam | 852.6 MB | ||
EGAF00003029775 | bam | 871.1 MB | ||
EGAF00003029776 | bam | 711.5 MB | ||
EGAF00003029777 | bam | 904.0 MB | ||
EGAF00003029778 | bam | 860.3 MB | ||
EGAF00003029779 | bam | 994.2 MB | ||
EGAF00003029780 | bam | 611.4 MB | ||
EGAF00003029782 | bam | 827.9 MB | ||
EGAF00003029783 | bam | 800.1 MB | ||
EGAF00003029784 | bam | 444.5 MB | ||
EGAF00003029785 | bam | 893.9 MB | ||
EGAF00003029787 | bam | 913.6 MB | ||
EGAF00003029788 | bam | 539.0 MB | ||
EGAF00003029790 | bam | 790.2 MB | ||
EGAF00003029791 | bam | 555.8 MB | ||
EGAF00003029793 | bam | 871.4 MB | ||
EGAF00003029795 | bam | 917.0 MB | ||
EGAF00003029797 | bam | 825.9 MB | ||
EGAF00003029798 | bam | 1.2 GB | ||
EGAF00003029799 | bam | 1.3 GB | ||
EGAF00003029800 | bam | 604.4 MB | ||
EGAF00003029802 | bam | 830.2 MB | ||
EGAF00003029805 | bam | 1.7 GB | ||
EGAF00003029807 | bam | 645.5 MB | ||
EGAF00003029809 | bam | 664.7 MB | ||
EGAF00003029810 | bam | 590.7 MB | ||
EGAF00003029811 | bam | 742.7 MB | ||
EGAF00003029812 | bam | 365.1 MB | ||
EGAF00003029813 | bam | 1.2 GB | ||
EGAF00003029816 | bam | 864.0 MB | ||
EGAF00003029817 | bam | 893.9 MB | ||
36 Files (29.9 GB) |