Validation data for the SV analysis package: GRIDSS, PURPLE, LINX
Validation data containing sequencing data of 13 samples. An hybrid capture approach was used to validate findings of both Manta and GRIDSS for the samples in the validation set. The dataset also contains the reference sequences used.
- 13 samples
- DAC: EGAC00001001398
- Technology: Illumina NovaSeq 6000
Hartwig Medical Foundation data policy
The principles and guidelines and policies of Hartwig Medical Foundation can be found at https://www.hartwigmedicalfoundation.nl/en/data-policy/. Handling data with care Hartwig Medical Foundation applies core values on which its choices are based. For the usage of data provided by patients and institutions, these core values have been translated into basic principles and guidelines in four different fields (social, ethical, legal and contractual). Privacy policy Needless to say, Hartwig Medical Foundation applies a strict privacy policy for the usage of personal data. Publication policy If the data from the database are used for scientific research resulting in publications, or from scientific publications derived from the database, the publication policy of Hartwig Medical Foundation applies.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004034 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002871790 | bam | 4.5 GB | ||
| EGAF00002871791 | bam | 4.1 GB | ||
| EGAF00002871792 | bam | 4.8 GB | ||
| EGAF00002871793 | bam | 5.8 GB | ||
| EGAF00002871794 | bam | 4.4 GB | ||
| EGAF00002871795 | bam | 4.1 GB | ||
| EGAF00002871796 | bam | 5.4 GB | ||
| EGAF00002871797 | bam | 5.5 GB | ||
| EGAF00002871798 | bam | 4.4 GB | ||
| EGAF00002871799 | bam | 4.5 GB | ||
| EGAF00002871800 | bam | 4.3 GB | ||
| EGAF00002871801 | bam | 5.3 GB | ||
| EGAF00002871802 | bam | 5.8 GB | ||
| 13 Files (63.0 GB) | ||||