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Targeted and exome sequencing data from 24 prostate cancer patients with somatic hypermutation

This dataset contains all available targeted and exome sequencing paired fastq files from our study, "Identification of hypermutation and defective mismatch repair in ctDNA from metastatic prostate cancer". Patient identifiers are denoted by the first three characters of the sample aliases (e.g. "P01"), and additional information is appended to reflect the panel used (targeted 73 gene panel: "PC", or whole-exome panel: "WXS"), and whether the sample represents cell-free DNA ("cfdna") or paired white-blood cell control ("wbc"). Several patients have multiple serial collections available, and these are denoted by the characters "C1, C2, C3," etc. All samples were sequenced using Illumina technology.

Request Access

Data Access Committee for the DNA sequencing data included in the study "Identification of hypermutation and defective mismatch repair in ctDNA from metastatic prostate cancer”.

A data access agreement (DAA), based on the example DAA provided by EGA, is to be filled out by the requester and Hypermutation / MMRd Data Access Committee.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002847530 fq.gz 849.1 MB
EGAF00002847531 fq.gz 884.9 MB
EGAF00002847532 fq.gz 775.5 MB
EGAF00002847533 fq.gz 782.9 MB
EGAF00002847534 fq.gz 357.8 MB
EGAF00002847535 fq.gz 398.6 MB
EGAF00002847536 fq.gz 871.2 MB
EGAF00002847537 fq.gz 885.1 MB
EGAF00002847538 fq.gz 581.5 MB
EGAF00002847539 fq.gz 589.3 MB
EGAF00002847540 fq.gz 491.6 MB
EGAF00002847541 fq.gz 489.4 MB
EGAF00002847542 fq.gz 792.8 MB
EGAF00002847543 fq.gz 813.3 MB
EGAF00002847544 fq.gz 1.0 GB
EGAF00002847545 fq.gz 1.1 GB
EGAF00002847546 fq.gz 434.2 MB
EGAF00002847547 fq.gz 436.5 MB
EGAF00002847548 fq.gz 1.1 GB
EGAF00002847549 fq.gz 1.1 GB
EGAF00002847550 fq.gz 491.0 MB
EGAF00002847551 fq.gz 503.5 MB
EGAF00002847552 fq.gz 1.1 GB
EGAF00002847553 fq.gz 1.1 GB
EGAF00002847554 fq.gz 621.4 MB
EGAF00002847555 fq.gz 635.0 MB
EGAF00002847556 fq.gz 598.5 MB
EGAF00002847557 fq.gz 599.3 MB
EGAF00002847558 fq.gz 583.7 MB
EGAF00002847559 fq.gz 584.3 MB
EGAF00002847560 fq.gz 580.0 MB
EGAF00002847561 fq.gz 582.0 MB
EGAF00002847562 fq.gz 500.7 MB
EGAF00002847563 fq.gz 560.6 MB
EGAF00002847564 fq.gz 773.9 MB
EGAF00002847565 fq.gz 804.6 MB
EGAF00002847566 fq.gz 496.9 MB
EGAF00002847567 fq.gz 544.9 MB
EGAF00002847568 fq.gz 758.7 MB
EGAF00002847569 fq.gz 861.4 MB
EGAF00002847570 fq.gz 763.7 MB
EGAF00002847571 fq.gz 777.9 MB
EGAF00002847572 fq.gz 530.5 MB
EGAF00002847573 fq.gz 583.0 MB
EGAF00002847574 fq.gz 580.5 MB
EGAF00002847575 fq.gz 592.3 MB
EGAF00002847576 fq.gz 603.6 MB
EGAF00002847577 fq.gz 613.3 MB
EGAF00002847578 fq.gz 586.3 MB
EGAF00002847579 fq.gz 601.9 MB
EGAF00002847580 fq.gz 483.6 MB
EGAF00002847581 fq.gz 491.9 MB
EGAF00002847582 fq.gz 549.7 MB
EGAF00002847583 fq.gz 559.3 MB
EGAF00002847584 fq.gz 451.3 MB
EGAF00002847585 fq.gz 503.6 MB
EGAF00002847586 fq.gz 566.2 MB
EGAF00002847587 fq.gz 582.3 MB
EGAF00002847588 fq.gz 395.0 MB
EGAF00002847589 fq.gz 398.4 MB
EGAF00002847590 fq.gz 783.4 MB
EGAF00002847591 fq.gz 801.9 MB
EGAF00002847592 fq.gz 1.1 GB
EGAF00002847593 fq.gz 1.1 GB
EGAF00002847594 fq.gz 600.3 MB
EGAF00002847595 fq.gz 616.9 MB
EGAF00002847596 fq.gz 531.5 MB
EGAF00002847597 fq.gz 537.7 MB
EGAF00002847598 fq.gz 520.8 MB
EGAF00002847599 fq.gz 528.0 MB
EGAF00002847600 fq.gz 484.0 MB
EGAF00002847601 fq.gz 569.0 MB
EGAF00002847602 fq.gz 300.2 MB
EGAF00002847603 fq.gz 306.9 MB
EGAF00002847604 fq.gz 705.5 MB
EGAF00002847605 fq.gz 710.7 MB
EGAF00002847606 fq.gz 616.8 MB
EGAF00002847607 fq.gz 624.7 MB
EGAF00002847608 fq.gz 702.3 MB
EGAF00002847609 fq.gz 797.7 MB
EGAF00002847610 fq.gz 508.3 MB
EGAF00002847611 fq.gz 559.0 MB
EGAF00002847612 fq.gz 476.4 MB
EGAF00002847613 fq.gz 536.0 MB
EGAF00002847614 fq.gz 583.3 MB
EGAF00002847615 fq.gz 626.0 MB
EGAF00002847616 fq.gz 659.9 MB
EGAF00002847617 fq.gz 733.7 MB
EGAF00002847618 fq.gz 784.9 MB
EGAF00002847619 fq.gz 797.7 MB
EGAF00002847620 fq.gz 6.8 GB
EGAF00002847621 fq.gz 7.0 GB
EGAF00002847622 fq.gz 11.5 GB
EGAF00002847623 fq.gz 11.8 GB
EGAF00002847624 fq.gz 8.1 GB
EGAF00002847625 fq.gz 8.4 GB
EGAF00002847626 fq.gz 7.5 GB
EGAF00002847627 fq.gz 7.9 GB
EGAF00002847628 fq.gz 9.2 GB
EGAF00002847629 fq.gz 9.4 GB
EGAF00002847630 fq.gz 2.6 GB
EGAF00002847631 fq.gz 2.7 GB
EGAF00002847632 fq.gz 7.1 GB
EGAF00002847633 fq.gz 7.3 GB
EGAF00002847634 fq.gz 7.5 GB
EGAF00002847635 fq.gz 7.6 GB
EGAF00002847636 fq.gz 11.2 GB
EGAF00002847637 fq.gz 11.5 GB
EGAF00002847638 fq.gz 11.4 GB
EGAF00002847639 fq.gz 11.6 GB
EGAF00002847640 fq.gz 3.5 GB
EGAF00002847641 fq.gz 3.6 GB
EGAF00002847642 fq.gz 3.7 GB
EGAF00002847643 fq.gz 3.8 GB
EGAF00002847644 fq.gz 7.3 GB
EGAF00002847645 fq.gz 7.4 GB
EGAF00002847646 fq.gz 12.0 GB
EGAF00002847647 fq.gz 11.9 GB
EGAF00002847648 fq.gz 9.2 GB
EGAF00002847649 fq.gz 9.4 GB
EGAF00002847650 fq.gz 7.9 GB
EGAF00002847651 fq.gz 8.1 GB
EGAF00002847652 fq.gz 12.3 GB
EGAF00002847653 fq.gz 12.6 GB
EGAF00002847654 fq.gz 12.1 GB
EGAF00002847655 fq.gz 12.4 GB
EGAF00002847656 fq.gz 3.7 GB
EGAF00002847657 fq.gz 3.8 GB
EGAF00002847658 fq.gz 8.2 GB
EGAF00002847659 fq.gz 8.5 GB
EGAF00002847660 fq.gz 14.4 GB
EGAF00002847661 fq.gz 14.8 GB
EGAF00002847662 fq.gz 7.5 GB
EGAF00002847663 fq.gz 7.6 GB
EGAF00002847664 fq.gz 6.8 GB
EGAF00002847665 fq.gz 7.1 GB
EGAF00002847666 fq.gz 8.5 GB
EGAF00002847667 fq.gz 8.7 GB
EGAF00002847668 fq.gz 7.7 GB
EGAF00002847669 fq.gz 7.9 GB
EGAF00002847670 fq.gz 8.5 GB
EGAF00002847671 fq.gz 8.7 GB
EGAF00002847672 fq.gz 6.9 GB
EGAF00002847673 fq.gz 7.1 GB
EGAF00002847674 fq.gz 6.3 GB
EGAF00002847675 fq.gz 6.5 GB
EGAF00002847676 fq.gz 19.5 GB
EGAF00002847677 fq.gz 20.0 GB
EGAF00002847678 fq.gz 9.1 GB
EGAF00002847679 fq.gz 9.5 GB
EGAF00002847680 fq.gz 8.5 GB
EGAF00002847681 fq.gz 8.9 GB
EGAF00002847682 fq.gz 20.9 GB
EGAF00002847683 fq.gz 21.5 GB
EGAF00002847684 fq.gz 438.6 MB
EGAF00002847685 fq.gz 452.8 MB
EGAF00002847686 fq.gz 281.0 MB
EGAF00002847687 fq.gz 283.4 MB
EGAF00002847688 fq.gz 470.3 MB
EGAF00002847689 fq.gz 433.1 MB
EGAF00002847690 fq.gz 171.8 MB
EGAF00002847691 fq.gz 199.7 MB
EGAF00002847692 fq.gz 171.8 MB
EGAF00002847693 fq.gz 199.7 MB
EGAF00002847694 fq.gz 347.5 MB
EGAF00002847695 fq.gz 354.3 MB
EGAF00002847696 fq.gz 347.5 MB
EGAF00002847697 fq.gz 354.3 MB
EGAF00002847698 fq.gz 175.1 MB
EGAF00002847699 fq.gz 176.3 MB
EGAF00002847700 fq.gz 242.1 MB
EGAF00002847701 fq.gz 250.7 MB
EGAF00002847702 fq.gz 242.1 MB
EGAF00002847703 fq.gz 250.7 MB
EGAF00002847704 fq.gz 262.2 MB
EGAF00002847705 fq.gz 268.1 MB
EGAF00002847706 fq.gz 262.2 MB
EGAF00002847707 fq.gz 268.1 MB
EGAF00002847708 fq.gz 262.2 MB
EGAF00002847709 fq.gz 268.1 MB
EGAF00002847710 fq.gz 177.6 MB
EGAF00002847711 fq.gz 192.3 MB
EGAF00002847712 fq.gz 177.6 MB
EGAF00002847713 fq.gz 192.3 MB
EGAF00002847714 fq.gz 177.6 MB
EGAF00002847715 fq.gz 192.3 MB
EGAF00002847716 fq.gz 273.1 MB
EGAF00002847717 fq.gz 314.4 MB
EGAF00002847718 fq.gz 273.1 MB
EGAF00002847719 fq.gz 314.4 MB
EGAF00002847720 fq.gz 246.1 MB
EGAF00002847721 fq.gz 274.9 MB
EGAF00002847722 fq.gz 289.9 MB
EGAF00002847723 fq.gz 335.1 MB
EGAF00002847724 fq.gz 170.0 MB
EGAF00002847725 fq.gz 172.0 MB
EGAF00002847726 fq.gz 278.5 MB
EGAF00002847727 fq.gz 306.8 MB
EGAF00002847728 fq.gz 303.7 MB
EGAF00002847729 fq.gz 308.6 MB
EGAF00002847730 fq.gz 303.7 MB
EGAF00002847731 fq.gz 308.6 MB
EGAF00002847732 fq.gz 303.7 MB
EGAF00002847733 fq.gz 308.6 MB
EGAF00002847734 fq.gz 262.4 MB
EGAF00002847735 fq.gz 274.8 MB
EGAF00002847736 fq.gz 262.4 MB
EGAF00002847737 fq.gz 274.8 MB
EGAF00002847738 fq.gz 100.0 MB
EGAF00002847739 fq.gz 119.3 MB
EGAF00002847740 fq.gz 100.0 MB
EGAF00002847741 fq.gz 119.3 MB
EGAF00002847742 fq.gz 100.0 MB
EGAF00002847743 fq.gz 119.3 MB
EGAF00002847744 fq.gz 27.5 MB
EGAF00002847745 fq.gz 28.4 MB
EGAF00002847746 fq.gz 27.5 MB
EGAF00002847747 fq.gz 28.4 MB
EGAF00002847748 fq.gz 180.4 MB
EGAF00002847749 fq.gz 194.9 MB
EGAF00002847750 fq.gz 180.4 MB
EGAF00002847751 fq.gz 194.9 MB
EGAF00002847752 fq.gz 180.4 MB
EGAF00002847753 fq.gz 194.9 MB
EGAF00002847754 fq.gz 43.4 MB
EGAF00002847755 fq.gz 52.5 MB
EGAF00002847756 fq.gz 43.4 MB
EGAF00002847757 fq.gz 52.5 MB
EGAF00002847758 fq.gz 43.4 MB
EGAF00002847759 fq.gz 52.5 MB
EGAF00002847760 fq.gz 293.7 MB
EGAF00002847761 fq.gz 295.9 MB
EGAF00002847762 fq.gz 283.4 MB
EGAF00002847763 fq.gz 326.8 MB
EGAF00002847764 fq.gz 299.8 MB
EGAF00002847765 fq.gz 328.0 MB
EGAF00002847766 fq.gz 320.5 MB
EGAF00002847767 fq.gz 324.4 MB
EGAF00002847768 fq.gz 320.5 MB
EGAF00002847769 fq.gz 324.4 MB
EGAF00002847770 fq.gz 320.5 MB
EGAF00002847771 fq.gz 324.4 MB
EGAF00002847772 fq.gz 320.5 MB
EGAF00002847773 fq.gz 324.4 MB
EGAF00002847774 fq.gz 2.4 GB
EGAF00002847775 fq.gz 2.4 GB
EGAF00002847776 fq.gz 5.5 GB
EGAF00002847777 fq.gz 5.6 GB
EGAF00002847778 fq.gz 8.3 GB
EGAF00002847779 fq.gz 8.6 GB
EGAF00002847780 fq.gz 5.9 GB
EGAF00002847781 fq.gz 6.1 GB
EGAF00002847782 fq.gz 5.9 GB
EGAF00002847783 fq.gz 6.1 GB
EGAF00002847784 fq.gz 2.8 GB
EGAF00002847785 fq.gz 2.9 GB
EGAF00002847786 fq.gz 2.8 GB
EGAF00002847787 fq.gz 2.9 GB
EGAF00002847788 fq.gz 5.9 GB
EGAF00002847789 fq.gz 6.0 GB
EGAF00002847790 fq.gz 4.9 GB
EGAF00002847791 fq.gz 5.1 GB
EGAF00002847792 fq.gz 4.9 GB
EGAF00002847793 fq.gz 5.1 GB
EGAF00002847794 fq.gz 1.7 GB
EGAF00002847795 fq.gz 1.7 GB
EGAF00002847796 fq.gz 1.7 GB
EGAF00002847797 fq.gz 1.7 GB
EGAF00002847798 fq.gz 1.7 GB
EGAF00002847799 fq.gz 1.7 GB
EGAF00002847800 fq.gz 5.6 GB
EGAF00002847801 fq.gz 5.8 GB
EGAF00002847802 fq.gz 5.6 GB
EGAF00002847803 fq.gz 5.8 GB
EGAF00002847804 fq.gz 5.6 GB
EGAF00002847805 fq.gz 5.8 GB
EGAF00002847806 fq.gz 5.1 GB
EGAF00002847807 fq.gz 5.1 GB
EGAF00002847808 fq.gz 5.1 GB
EGAF00002847809 fq.gz 5.1 GB
EGAF00002847810 fq.gz 1.5 GB
EGAF00002847811 fq.gz 1.6 GB
EGAF00002847812 fq.gz 3.9 GB
EGAF00002847813 fq.gz 4.1 GB
EGAF00002847814 fq.gz 7.1 GB
EGAF00002847815 fq.gz 7.2 GB
EGAF00002847816 fq.gz 8.3 GB
EGAF00002847817 fq.gz 8.4 GB
EGAF00002847818 fq.gz 3.6 GB
EGAF00002847819 fq.gz 3.5 GB
EGAF00002847820 fq.gz 428.9 MB
EGAF00002847821 fq.gz 448.3 MB
EGAF00002847822 fq.gz 3.8 GB
EGAF00002847823 fq.gz 3.9 GB
EGAF00002847824 fq.gz 3.8 GB
EGAF00002847825 fq.gz 3.9 GB
EGAF00002847826 fq.gz 3.8 GB
EGAF00002847827 fq.gz 3.9 GB
EGAF00002847828 fq.gz 4.8 GB
EGAF00002847829 fq.gz 4.9 GB
EGAF00002847830 fq.gz 6.6 GB
EGAF00002847831 fq.gz 6.8 GB
EGAF00002847832 fq.gz 4.1 GB
EGAF00002847833 fq.gz 4.3 GB
EGAF00002847834 fq.gz 3.8 GB
EGAF00002847835 fq.gz 3.9 GB
EGAF00002847836 fq.gz 5.9 GB
EGAF00002847837 fq.gz 5.9 GB
308 Files (950.6 GB)