Peripheral clonal expansion of T cells (scTCR-seq)
Single-cell TCR-seq of tumor-infiltrating lymphocytes from 14 cancer patients before treatment, taken from tumor, normal adjacent tissue, and peripheral blood. Dataset consists of paired-end FASTQ files, including replicate libraries and runs.
- 88 samples
- DAC: EGAC00001000055
- Technology: Illumina HiSeq 2500
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Any invention or discovery made by User and/or User Organization arising out of the use of the Data (each a “Data Invention”) shall be promptly disclosed to Genentech in writing. User Organization hereby grants to Genentech a royalty-free, fully-paid, non-exclusive license (i) to make, use and import such Data Invention for internal research purposes; and (ii) to make, use, offer to sell, sell and import such Data Invention to the extent necessary to commercialize Genentech product(s), which license shall be sublicensable to Genentech’s affiliates and development and commercialization collaborators on such product(s). 10.You agree that you will submit a report to the Genentech Data Access Committee, if requested, on completion of the agreed purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Organization.11.(a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws.(b) The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 12.This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 13 below.13.You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. Either Party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination: Sections 1 – 10, 11(a), and 13. For and on behalf of User/Applicant:___________________________Signature of User/Applicant___________________________Print Name of User/Applicant___________________________Title___________________________DateFor and on behalf of User Organization:___________________________Signature of Organizational or Administrative Authority___________________________Print Name___________________________Title___________________________Name of User Organization___________________________DateFor Genentech, Inc.:___________________________Signature___________________________Print Name___________________________Title___________________________Date
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002839058 | fastq.gz | 2.2 GB | ||
| EGAF00002839059 | fastq.gz | 2.3 GB | ||
| EGAF00002839060 | fastq.gz | 2.1 GB | ||
| EGAF00002839061 | fastq.gz | 2.2 GB | ||
| EGAF00002839062 | fastq.gz | 2.2 GB | ||
| EGAF00002839063 | fastq.gz | 2.3 GB | ||
| EGAF00002839064 | fastq.gz | 2.1 GB | ||
| EGAF00002839065 | fastq.gz | 2.2 GB | ||
| EGAF00002839066 | fastq.gz | 2.2 GB | ||
| EGAF00002839067 | fastq.gz | 2.3 GB | ||
| EGAF00002839068 | fastq.gz | 2.2 GB | ||
| EGAF00002839069 | fastq.gz | 2.3 GB | ||
| EGAF00002839070 | fastq.gz | 4.6 GB | ||
| EGAF00002839071 | fastq.gz | 4.8 GB | ||
| EGAF00002839072 | fastq.gz | 4.4 GB | ||
| EGAF00002839073 | fastq.gz | 4.7 GB | ||
| EGAF00002839074 | fastq.gz | 4.9 GB | ||
| EGAF00002839075 | fastq.gz | 5.1 GB | ||
| EGAF00002839076 | fastq.gz | 4.7 GB | ||
| EGAF00002839077 | fastq.gz | 4.9 GB | ||
| EGAF00002839078 | fastq.gz | 3.6 GB | ||
| EGAF00002839079 | fastq.gz | 3.8 GB | ||
| EGAF00002839080 | fastq.gz | 3.5 GB | ||
| EGAF00002839081 | fastq.gz | 3.7 GB | ||
| EGAF00002839082 | fastq.gz | 3.7 GB | ||
| EGAF00002839083 | fastq.gz | 3.8 GB | ||
| EGAF00002839084 | fastq.gz | 3.5 GB | ||
| EGAF00002839085 | fastq.gz | 3.7 GB | ||
| EGAF00002839086 | fastq.gz | 3.7 GB | ||
| EGAF00002839087 | fastq.gz | 3.9 GB | ||
| EGAF00002839088 | fastq.gz | 3.2 GB | ||
| EGAF00002839089 | fastq.gz | 3.5 GB | ||
| EGAF00002839090 | fastq.gz | 3.4 GB | ||
| EGAF00002839091 | fastq.gz | 3.6 GB | ||
| EGAF00002839092 | fastq.gz | 3.5 GB | ||
| EGAF00002839093 | fastq.gz | 3.8 GB | ||
| EGAF00002839094 | fastq.gz | 4.3 GB | ||
| EGAF00002839095 | fastq.gz | 4.6 GB | ||
| EGAF00002839096 | fastq.gz | 4.4 GB | ||
| EGAF00002839097 | fastq.gz | 4.7 GB | ||
| EGAF00002839098 | fastq.gz | 4.4 GB | ||
| EGAF00002839099 | fastq.gz | 4.7 GB | ||
| EGAF00002839100 | fastq.gz | 4.4 GB | ||
| EGAF00002839101 | fastq.gz | 4.7 GB | ||
| EGAF00002839102 | fastq.gz | 3.9 GB | ||
| EGAF00002839103 | fastq.gz | 4.1 GB | ||
| EGAF00002839104 | fastq.gz | 4.0 GB | ||
| EGAF00002839105 | fastq.gz | 4.2 GB | ||
| EGAF00002839106 | fastq.gz | 3.9 GB | ||
| EGAF00002839107 | fastq.gz | 4.2 GB | ||
| EGAF00002839108 | fastq.gz | 4.0 GB | ||
| EGAF00002839109 | fastq.gz | 4.2 GB | ||
| EGAF00002839110 | fastq.gz | 2.7 GB | ||
| EGAF00002839111 | fastq.gz | 2.8 GB | ||
| EGAF00002839112 | fastq.gz | 2.7 GB | ||
| EGAF00002839113 | fastq.gz | 2.8 GB | ||
| EGAF00002839114 | fastq.gz | 2.9 GB | ||
| EGAF00002839115 | fastq.gz | 2.9 GB | ||
| EGAF00002839116 | fastq.gz | 2.8 GB | ||
| EGAF00002839117 | fastq.gz | 2.9 GB | ||
| EGAF00002839118 | fastq.gz | 692.0 MB | ||
| EGAF00002839119 | fastq.gz | 756.3 MB | ||
| EGAF00002839120 | fastq.gz | 694.6 MB | ||
| EGAF00002839121 | fastq.gz | 758.7 MB | ||
| EGAF00002839122 | fastq.gz | 2.0 GB | ||
| EGAF00002839123 | fastq.gz | 2.1 GB | ||
| EGAF00002839124 | fastq.gz | 2.0 GB | ||
| EGAF00002839125 | fastq.gz | 2.1 GB | ||
| EGAF00002839126 | fastq.gz | 762.3 MB | ||
| EGAF00002839127 | fastq.gz | 819.9 MB | ||
| EGAF00002839128 | fastq.gz | 764.2 MB | ||
| EGAF00002839129 | fastq.gz | 822.2 MB | ||
| EGAF00002839130 | fastq.gz | 2.1 GB | ||
| EGAF00002839131 | fastq.gz | 2.2 GB | ||
| EGAF00002839132 | fastq.gz | 2.1 GB | ||
| EGAF00002839133 | fastq.gz | 2.1 GB | ||
| EGAF00002839134 | fastq.gz | 716.8 MB | ||
| EGAF00002839135 | fastq.gz | 772.1 MB | ||
| EGAF00002839136 | fastq.gz | 718.8 MB | ||
| EGAF00002839137 | fastq.gz | 774.8 MB | ||
| EGAF00002839138 | fastq.gz | 2.0 GB | ||
| EGAF00002839139 | fastq.gz | 2.1 GB | ||
| EGAF00002839140 | fastq.gz | 1.9 GB | ||
| EGAF00002839141 | fastq.gz | 2.0 GB | ||
| EGAF00002839142 | fastq.gz | 1.2 GB | ||
| EGAF00002839143 | fastq.gz | 1.2 GB | ||
| EGAF00002839144 | fastq.gz | 1.2 GB | ||
| EGAF00002839145 | fastq.gz | 1.3 GB | ||
| EGAF00002839146 | fastq.gz | 1.2 GB | ||
| EGAF00002839147 | fastq.gz | 1.2 GB | ||
| EGAF00002839148 | fastq.gz | 1.2 GB | ||
| EGAF00002839149 | fastq.gz | 1.3 GB | ||
| EGAF00002839150 | fastq.gz | 1.1 GB | ||
| EGAF00002839151 | fastq.gz | 1.1 GB | ||
| EGAF00002839152 | fastq.gz | 1.1 GB | ||
| EGAF00002839153 | fastq.gz | 1.1 GB | ||
| EGAF00002839154 | fastq.gz | 827.6 MB | ||
| EGAF00002839155 | fastq.gz | 862.1 MB | ||
| EGAF00002839156 | fastq.gz | 853.8 MB | ||
| EGAF00002839157 | fastq.gz | 890.0 MB | ||
| EGAF00002839158 | fastq.gz | 1.2 GB | ||
| EGAF00002839159 | fastq.gz | 1.2 GB | ||
| EGAF00002839160 | fastq.gz | 1.2 GB | ||
| EGAF00002839161 | fastq.gz | 1.3 GB | ||
| EGAF00002839162 | fastq.gz | 1.2 GB | ||
| EGAF00002839163 | fastq.gz | 1.2 GB | ||
| EGAF00002839164 | fastq.gz | 1.2 GB | ||
| EGAF00002839165 | fastq.gz | 1.3 GB | ||
| EGAF00002839166 | fastq.gz | 1.2 GB | ||
| EGAF00002839167 | fastq.gz | 1.2 GB | ||
| EGAF00002839168 | fastq.gz | 1.2 GB | ||
| EGAF00002839169 | fastq.gz | 1.3 GB | ||
| EGAF00002839170 | fastq.gz | 5.8 GB | ||
| EGAF00002839171 | fastq.gz | 6.0 GB | ||
| EGAF00002839172 | fastq.gz | 6.0 GB | ||
| EGAF00002839173 | fastq.gz | 6.2 GB | ||
| EGAF00002839174 | fastq.gz | 5.7 GB | ||
| EGAF00002839175 | fastq.gz | 5.9 GB | ||
| EGAF00002839176 | fastq.gz | 5.9 GB | ||
| EGAF00002839177 | fastq.gz | 6.1 GB | ||
| EGAF00002839178 | fastq.gz | 5.6 GB | ||
| EGAF00002839179 | fastq.gz | 5.9 GB | ||
| EGAF00002839180 | fastq.gz | 5.8 GB | ||
| EGAF00002839181 | fastq.gz | 6.0 GB | ||
| EGAF00002839182 | fastq.gz | 3.9 GB | ||
| EGAF00002839183 | fastq.gz | 4.1 GB | ||
| EGAF00002839184 | fastq.gz | 3.9 GB | ||
| EGAF00002839185 | fastq.gz | 4.1 GB | ||
| EGAF00002839186 | fastq.gz | 3.1 GB | ||
| EGAF00002839187 | fastq.gz | 3.2 GB | ||
| EGAF00002839188 | fastq.gz | 3.1 GB | ||
| EGAF00002839189 | fastq.gz | 3.2 GB | ||
| EGAF00002839190 | fastq.gz | 3.2 GB | ||
| EGAF00002839191 | fastq.gz | 3.4 GB | ||
| EGAF00002839192 | fastq.gz | 3.2 GB | ||
| EGAF00002839193 | fastq.gz | 3.4 GB | ||
| EGAF00002839194 | fastq.gz | 3.0 GB | ||
| EGAF00002839195 | fastq.gz | 3.2 GB | ||
| EGAF00002839196 | fastq.gz | 3.0 GB | ||
| EGAF00002839197 | fastq.gz | 3.2 GB | ||
| EGAF00002839198 | fastq.gz | 4.9 GB | ||
| EGAF00002839199 | fastq.gz | 5.0 GB | ||
| EGAF00002839200 | fastq.gz | 4.9 GB | ||
| EGAF00002839201 | fastq.gz | 5.0 GB | ||
| EGAF00002839202 | fastq.gz | 3.6 GB | ||
| EGAF00002839203 | fastq.gz | 3.7 GB | ||
| EGAF00002839204 | fastq.gz | 3.6 GB | ||
| EGAF00002839205 | fastq.gz | 3.7 GB | ||
| EGAF00002839206 | fastq.gz | 3.8 GB | ||
| EGAF00002839207 | fastq.gz | 3.9 GB | ||
| EGAF00002839208 | fastq.gz | 3.8 GB | ||
| EGAF00002839209 | fastq.gz | 3.9 GB | ||
| EGAF00002839210 | fastq.gz | 7.3 GB | ||
| EGAF00002839211 | fastq.gz | 7.6 GB | ||
| EGAF00002839212 | fastq.gz | 7.2 GB | ||
| EGAF00002839213 | fastq.gz | 7.5 GB | ||
| EGAF00002839214 | fastq.gz | 9.7 GB | ||
| EGAF00002839215 | fastq.gz | 10.0 GB | ||
| EGAF00002839216 | fastq.gz | 9.6 GB | ||
| EGAF00002839217 | fastq.gz | 9.9 GB | ||
| EGAF00002839218 | fastq.gz | 7.3 GB | ||
| EGAF00002839219 | fastq.gz | 7.6 GB | ||
| EGAF00002839220 | fastq.gz | 7.2 GB | ||
| EGAF00002839221 | fastq.gz | 7.5 GB | ||
| EGAF00002839222 | fastq.gz | 3.3 GB | ||
| EGAF00002839223 | fastq.gz | 3.4 GB | ||
| EGAF00002839224 | fastq.gz | 3.2 GB | ||
| EGAF00002839225 | fastq.gz | 3.3 GB | ||
| EGAF00002839226 | fastq.gz | 3.0 GB | ||
| EGAF00002839227 | fastq.gz | 3.1 GB | ||
| EGAF00002839228 | fastq.gz | 2.9 GB | ||
| EGAF00002839229 | fastq.gz | 3.0 GB | ||
| EGAF00002839230 | fastq.gz | 3.1 GB | ||
| EGAF00002839231 | fastq.gz | 3.2 GB | ||
| EGAF00002839232 | fastq.gz | 3.0 GB | ||
| EGAF00002839233 | fastq.gz | 3.1 GB | ||
| 176 Files (590.7 GB) | ||||