Peripheral clonal expansion of T cells (scTCR-seq)
Single-cell TCR-seq of tumor-infiltrating lymphocytes from 14 cancer patients before treatment, taken from tumor, normal adjacent tissue, and peripheral blood. Dataset consists of paired-end FASTQ files, including replicate libraries and runs.
- 88 samples
- DAC: EGAC00001000055
- Technology: Illumina HiSeq 2500
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In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.3.You agree not to attempt to link the Data provided under this Agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees.4.You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or program management. 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You agree to acknowledge in any such publication that the research makes use of Data generated by Genentech/gRED.7.You accept that Genentech:a.bears no legal responsibility for the accuracy or comprehensiveness of the Data; and b.accepts no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason.8.You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted.9.You recognize that nothing in this Agreement shall operate to transfer to the User Organization any intellectual property rights relating to the Data. The User Organization has the right to develop intellectual property based on the comparisons with their own data. Any invention or discovery made by User and/or User Organization arising out of the use of the Data (each a “Data Invention”) shall be promptly disclosed to Genentech in writing. User Organization hereby grants to Genentech a royalty-free, fully-paid, non-exclusive license (i) to make, use and import such Data Invention for internal research purposes; and (ii) to make, use, offer to sell, sell and import such Data Invention to the extent necessary to commercialize Genentech product(s), which license shall be sublicensable to Genentech’s affiliates and development and commercialization collaborators on such product(s). 10.You agree that you will submit a report to the Genentech Data Access Committee, if requested, on completion of the agreed purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Organization.11.(a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws.(b) The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 12.This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 13 below.13.You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. Either Party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination: Sections 1 – 10, 11(a), and 13. For and on behalf of User/Applicant:___________________________Signature of User/Applicant___________________________Print Name of User/Applicant___________________________Title___________________________DateFor and on behalf of User Organization:___________________________Signature of Organizational or Administrative Authority___________________________Print Name___________________________Title___________________________Name of User Organization___________________________DateFor Genentech, Inc.:___________________________Signature___________________________Print Name___________________________Title___________________________Date
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001003994 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002839058 | fastq.gz | 2.2 GB | ||
| EGAF00002839059 | fastq.gz | 2.3 GB | ||
| EGAF00002839060 | fastq.gz | 2.1 GB | ||
| EGAF00002839061 | fastq.gz | 2.2 GB | ||
| EGAF00002839062 | fastq.gz | 2.2 GB | ||
| EGAF00002839063 | fastq.gz | 2.3 GB | ||
| EGAF00002839064 | fastq.gz | 2.1 GB | ||
| EGAF00002839065 | fastq.gz | 2.2 GB | ||
| EGAF00002839066 | fastq.gz | 2.2 GB | ||
| EGAF00002839067 | fastq.gz | 2.3 GB | ||
| EGAF00002839068 | fastq.gz | 2.2 GB | ||
| EGAF00002839069 | fastq.gz | 2.3 GB | ||
| EGAF00002839070 | fastq.gz | 4.6 GB | ||
| EGAF00002839071 | fastq.gz | 4.8 GB | ||
| EGAF00002839072 | fastq.gz | 4.4 GB | ||
| EGAF00002839073 | fastq.gz | 4.7 GB | ||
| EGAF00002839074 | fastq.gz | 4.9 GB | ||
| EGAF00002839075 | fastq.gz | 5.1 GB | ||
| EGAF00002839076 | fastq.gz | 4.7 GB | ||
| EGAF00002839077 | fastq.gz | 4.9 GB | ||
| EGAF00002839078 | fastq.gz | 3.6 GB | ||
| EGAF00002839079 | fastq.gz | 3.8 GB | ||
| EGAF00002839080 | fastq.gz | 3.5 GB | ||
| EGAF00002839081 | fastq.gz | 3.7 GB | ||
| EGAF00002839082 | fastq.gz | 3.7 GB | ||
| EGAF00002839083 | fastq.gz | 3.8 GB | ||
| EGAF00002839084 | fastq.gz | 3.5 GB | ||
| EGAF00002839085 | fastq.gz | 3.7 GB | ||
| EGAF00002839086 | fastq.gz | 3.7 GB | ||
| EGAF00002839087 | fastq.gz | 3.9 GB | ||
| EGAF00002839088 | fastq.gz | 3.2 GB | ||
| EGAF00002839089 | fastq.gz | 3.5 GB | ||
| EGAF00002839090 | fastq.gz | 3.4 GB | ||
| EGAF00002839091 | fastq.gz | 3.6 GB | ||
| EGAF00002839092 | fastq.gz | 3.5 GB | ||
| EGAF00002839093 | fastq.gz | 3.8 GB | ||
| EGAF00002839094 | fastq.gz | 4.3 GB | ||
| EGAF00002839095 | fastq.gz | 4.6 GB | ||
| EGAF00002839096 | fastq.gz | 4.4 GB | ||
| EGAF00002839097 | fastq.gz | 4.7 GB | ||
| EGAF00002839098 | fastq.gz | 4.4 GB | ||
| EGAF00002839099 | fastq.gz | 4.7 GB | ||
| EGAF00002839100 | fastq.gz | 4.4 GB | ||
| EGAF00002839101 | fastq.gz | 4.7 GB | ||
| EGAF00002839102 | fastq.gz | 3.9 GB | ||
| EGAF00002839103 | fastq.gz | 4.1 GB | ||
| EGAF00002839104 | fastq.gz | 4.0 GB | ||
| EGAF00002839105 | fastq.gz | 4.2 GB | ||
| EGAF00002839106 | fastq.gz | 3.9 GB | ||
| EGAF00002839107 | fastq.gz | 4.2 GB | ||
| EGAF00002839108 | fastq.gz | 4.0 GB | ||
| EGAF00002839109 | fastq.gz | 4.2 GB | ||
| EGAF00002839110 | fastq.gz | 2.7 GB | ||
| EGAF00002839111 | fastq.gz | 2.8 GB | ||
| EGAF00002839112 | fastq.gz | 2.7 GB | ||
| EGAF00002839113 | fastq.gz | 2.8 GB | ||
| EGAF00002839114 | fastq.gz | 2.9 GB | ||
| EGAF00002839115 | fastq.gz | 2.9 GB | ||
| EGAF00002839116 | fastq.gz | 2.8 GB | ||
| EGAF00002839117 | fastq.gz | 2.9 GB | ||
| EGAF00002839118 | fastq.gz | 692.0 MB | ||
| EGAF00002839119 | fastq.gz | 756.3 MB | ||
| EGAF00002839120 | fastq.gz | 694.6 MB | ||
| EGAF00002839121 | fastq.gz | 758.7 MB | ||
| EGAF00002839122 | fastq.gz | 2.0 GB | ||
| EGAF00002839123 | fastq.gz | 2.1 GB | ||
| EGAF00002839124 | fastq.gz | 2.0 GB | ||
| EGAF00002839125 | fastq.gz | 2.1 GB | ||
| EGAF00002839126 | fastq.gz | 762.3 MB | ||
| EGAF00002839127 | fastq.gz | 819.9 MB | ||
| EGAF00002839128 | fastq.gz | 764.2 MB | ||
| EGAF00002839129 | fastq.gz | 822.2 MB | ||
| EGAF00002839130 | fastq.gz | 2.1 GB | ||
| EGAF00002839131 | fastq.gz | 2.2 GB | ||
| EGAF00002839132 | fastq.gz | 2.1 GB | ||
| EGAF00002839133 | fastq.gz | 2.1 GB | ||
| EGAF00002839134 | fastq.gz | 716.8 MB | ||
| EGAF00002839135 | fastq.gz | 772.1 MB | ||
| EGAF00002839136 | fastq.gz | 718.8 MB | ||
| EGAF00002839137 | fastq.gz | 774.8 MB | ||
| EGAF00002839138 | fastq.gz | 2.0 GB | ||
| EGAF00002839139 | fastq.gz | 2.1 GB | ||
| EGAF00002839140 | fastq.gz | 1.9 GB | ||
| EGAF00002839141 | fastq.gz | 2.0 GB | ||
| EGAF00002839142 | fastq.gz | 1.2 GB | ||
| EGAF00002839143 | fastq.gz | 1.2 GB | ||
| EGAF00002839144 | fastq.gz | 1.2 GB | ||
| EGAF00002839145 | fastq.gz | 1.3 GB | ||
| EGAF00002839146 | fastq.gz | 1.2 GB | ||
| EGAF00002839147 | fastq.gz | 1.2 GB | ||
| EGAF00002839148 | fastq.gz | 1.2 GB | ||
| EGAF00002839149 | fastq.gz | 1.3 GB | ||
| EGAF00002839150 | fastq.gz | 1.1 GB | ||
| EGAF00002839151 | fastq.gz | 1.1 GB | ||
| EGAF00002839152 | fastq.gz | 1.1 GB | ||
| EGAF00002839153 | fastq.gz | 1.1 GB | ||
| EGAF00002839154 | fastq.gz | 827.6 MB | ||
| EGAF00002839155 | fastq.gz | 862.1 MB | ||
| EGAF00002839156 | fastq.gz | 853.8 MB | ||
| EGAF00002839157 | fastq.gz | 890.0 MB | ||
| EGAF00002839158 | fastq.gz | 1.2 GB | ||
| EGAF00002839159 | fastq.gz | 1.2 GB | ||
| EGAF00002839160 | fastq.gz | 1.2 GB | ||
| EGAF00002839161 | fastq.gz | 1.3 GB | ||
| EGAF00002839162 | fastq.gz | 1.2 GB | ||
| EGAF00002839163 | fastq.gz | 1.2 GB | ||
| EGAF00002839164 | fastq.gz | 1.2 GB | ||
| EGAF00002839165 | fastq.gz | 1.3 GB | ||
| EGAF00002839166 | fastq.gz | 1.2 GB | ||
| EGAF00002839167 | fastq.gz | 1.2 GB | ||
| EGAF00002839168 | fastq.gz | 1.2 GB | ||
| EGAF00002839169 | fastq.gz | 1.3 GB | ||
| EGAF00002839170 | fastq.gz | 5.8 GB | ||
| EGAF00002839171 | fastq.gz | 6.0 GB | ||
| EGAF00002839172 | fastq.gz | 6.0 GB | ||
| EGAF00002839173 | fastq.gz | 6.2 GB | ||
| EGAF00002839174 | fastq.gz | 5.7 GB | ||
| EGAF00002839175 | fastq.gz | 5.9 GB | ||
| EGAF00002839176 | fastq.gz | 5.9 GB | ||
| EGAF00002839177 | fastq.gz | 6.1 GB | ||
| EGAF00002839178 | fastq.gz | 5.6 GB | ||
| EGAF00002839179 | fastq.gz | 5.9 GB | ||
| EGAF00002839180 | fastq.gz | 5.8 GB | ||
| EGAF00002839181 | fastq.gz | 6.0 GB | ||
| EGAF00002839182 | fastq.gz | 3.9 GB | ||
| EGAF00002839183 | fastq.gz | 4.1 GB | ||
| EGAF00002839184 | fastq.gz | 3.9 GB | ||
| EGAF00002839185 | fastq.gz | 4.1 GB | ||
| EGAF00002839186 | fastq.gz | 3.1 GB | ||
| EGAF00002839187 | fastq.gz | 3.2 GB | ||
| EGAF00002839188 | fastq.gz | 3.1 GB | ||
| EGAF00002839189 | fastq.gz | 3.2 GB | ||
| EGAF00002839190 | fastq.gz | 3.2 GB | ||
| EGAF00002839191 | fastq.gz | 3.4 GB | ||
| EGAF00002839192 | fastq.gz | 3.2 GB | ||
| EGAF00002839193 | fastq.gz | 3.4 GB | ||
| EGAF00002839194 | fastq.gz | 3.0 GB | ||
| EGAF00002839195 | fastq.gz | 3.2 GB | ||
| EGAF00002839196 | fastq.gz | 3.0 GB | ||
| EGAF00002839197 | fastq.gz | 3.2 GB | ||
| EGAF00002839198 | fastq.gz | 4.9 GB | ||
| EGAF00002839199 | fastq.gz | 5.0 GB | ||
| EGAF00002839200 | fastq.gz | 4.9 GB | ||
| EGAF00002839201 | fastq.gz | 5.0 GB | ||
| EGAF00002839202 | fastq.gz | 3.6 GB | ||
| EGAF00002839203 | fastq.gz | 3.7 GB | ||
| EGAF00002839204 | fastq.gz | 3.6 GB | ||
| EGAF00002839205 | fastq.gz | 3.7 GB | ||
| EGAF00002839206 | fastq.gz | 3.8 GB | ||
| EGAF00002839207 | fastq.gz | 3.9 GB | ||
| EGAF00002839208 | fastq.gz | 3.8 GB | ||
| EGAF00002839209 | fastq.gz | 3.9 GB | ||
| EGAF00002839210 | fastq.gz | 7.3 GB | ||
| EGAF00002839211 | fastq.gz | 7.6 GB | ||
| EGAF00002839212 | fastq.gz | 7.2 GB | ||
| EGAF00002839213 | fastq.gz | 7.5 GB | ||
| EGAF00002839214 | fastq.gz | 9.7 GB | ||
| EGAF00002839215 | fastq.gz | 10.0 GB | ||
| EGAF00002839216 | fastq.gz | 9.6 GB | ||
| EGAF00002839217 | fastq.gz | 9.9 GB | ||
| EGAF00002839218 | fastq.gz | 7.3 GB | ||
| EGAF00002839219 | fastq.gz | 7.6 GB | ||
| EGAF00002839220 | fastq.gz | 7.2 GB | ||
| EGAF00002839221 | fastq.gz | 7.5 GB | ||
| EGAF00002839222 | fastq.gz | 3.3 GB | ||
| EGAF00002839223 | fastq.gz | 3.4 GB | ||
| EGAF00002839224 | fastq.gz | 3.2 GB | ||
| EGAF00002839225 | fastq.gz | 3.3 GB | ||
| EGAF00002839226 | fastq.gz | 3.0 GB | ||
| EGAF00002839227 | fastq.gz | 3.1 GB | ||
| EGAF00002839228 | fastq.gz | 2.9 GB | ||
| EGAF00002839229 | fastq.gz | 3.0 GB | ||
| EGAF00002839230 | fastq.gz | 3.1 GB | ||
| EGAF00002839231 | fastq.gz | 3.2 GB | ||
| EGAF00002839232 | fastq.gz | 3.0 GB | ||
| EGAF00002839233 | fastq.gz | 3.1 GB | ||
| 176 Files (590.7 GB) | ||||