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Human Biofluid RNA Atlas

This dataset contains small RNA sequencing data and mRNA capture sequencing data from 20 different human biofluids (amniotic fluid, aqueous humor, ascites, bile, bronchial lavage fluid, breast milk, cerebrospinal fluid, colostrum, gastric fluid, pancreatic cyst fluid, plasma, saliva, seminal fluid, serum, sputum, stool, synovial fluid, sweat, tear fluid and urine). In total, 180 samples were sequenced. Files are provided in fastQ format. Samples were sequenced on a NextSeq 500.

Request Access

Human Biofluid RNA Atlas Data Access Policy

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom XXXXX grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: XXXXX and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. XXXXX: Your Institution details here 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify XXXXX within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify XXXXX prior to any significant changes to the protocol for the Project. 14. The User Institution will notify XXXXX as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. XXXXX may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than XXXXX. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002798583 fastq.gz 846.0 MB
EGAF00002798584 fastq.gz 861.4 MB
EGAF00002798585 fastq.gz 825.0 MB
EGAF00002798586 fastq.gz 845.3 MB
EGAF00002798587 fastq.gz 620.3 MB
EGAF00002798588 fastq.gz 629.9 MB
EGAF00002798589 fastq.gz 729.7 MB
EGAF00002798590 fastq.gz 743.3 MB
EGAF00002798591 fastq.gz 612.1 MB
EGAF00002798592 fastq.gz 621.1 MB
EGAF00002798593 fastq.gz 672.1 MB
EGAF00002798594 fastq.gz 692.3 MB
EGAF00002798595 fastq.gz 685.6 MB
EGAF00002798596 fastq.gz 699.0 MB
EGAF00002798597 fastq.gz 807.8 MB
EGAF00002798598 fastq.gz 831.1 MB
EGAF00002798599 fastq.gz 661.1 MB
EGAF00002798600 fastq.gz 679.5 MB
EGAF00002798601 fastq.gz 647.5 MB
EGAF00002798602 fastq.gz 665.7 MB
EGAF00002798603 fastq.gz 659.7 MB
EGAF00002798604 fastq.gz 715.8 MB
EGAF00002798605 fastq.gz 850.7 MB
EGAF00002798606 fastq.gz 867.4 MB
EGAF00002798607 fastq.gz 674.0 MB
EGAF00002798608 fastq.gz 692.8 MB
EGAF00002798609 fastq.gz 635.4 MB
EGAF00002798610 fastq.gz 647.9 MB
EGAF00002798611 fastq.gz 726.1 MB
EGAF00002798612 fastq.gz 739.7 MB
EGAF00002798613 fastq.gz 726.7 MB
EGAF00002798614 fastq.gz 745.0 MB
EGAF00002798615 fastq.gz 751.3 MB
EGAF00002798616 fastq.gz 764.5 MB
EGAF00002798617 fastq.gz 710.3 MB
EGAF00002798618 fastq.gz 728.0 MB
EGAF00002798619 fastq.gz 638.6 MB
EGAF00002798620 fastq.gz 650.8 MB
EGAF00002798621 fastq.gz 646.6 MB
EGAF00002798622 fastq.gz 659.7 MB
EGAF00002798623 fastq.gz 648.7 MB
EGAF00002798624 fastq.gz 673.7 MB
EGAF00002798625 fastq.gz 655.3 MB
EGAF00002798626 fastq.gz 671.5 MB
EGAF00002798627 fastq.gz 602.0 MB
EGAF00002798628 fastq.gz 615.1 MB
EGAF00002798629 fastq.gz 623.1 MB
EGAF00002798630 fastq.gz 635.3 MB
EGAF00002798631 fastq.gz 767.3 MB
EGAF00002798632 fastq.gz 782.6 MB
EGAF00002798633 fastq.gz 951.2 MB
EGAF00002798634 fastq.gz 983.1 MB
EGAF00002798635 fastq.gz 857.9 MB
EGAF00002798636 fastq.gz 879.1 MB
EGAF00002798637 fastq.gz 880.7 MB
EGAF00002798638 fastq.gz 903.1 MB
EGAF00002798639 fastq.gz 912.0 MB
EGAF00002798640 fastq.gz 976.3 MB
EGAF00002798641 fastq.gz 1.0 GB
EGAF00002798642 fastq.gz 1.1 GB
EGAF00002798643 fastq.gz 925.8 MB
EGAF00002798644 fastq.gz 957.8 MB
EGAF00002798645 fastq.gz 928.5 MB
EGAF00002798646 fastq.gz 949.8 MB
EGAF00002798647 fastq.gz 860.8 MB
EGAF00002798648 fastq.gz 905.5 MB
EGAF00002798649 fastq.gz 973.4 MB
EGAF00002798650 fastq.gz 1.0 GB
EGAF00002798651 fastq.gz 851.7 MB
EGAF00002798652 fastq.gz 883.5 MB
EGAF00002798653 fastq.gz 958.3 MB
EGAF00002798654 fastq.gz 993.6 MB
EGAF00002798655 fastq.gz 969.8 MB
EGAF00002798656 fastq.gz 994.0 MB
EGAF00002798657 fastq.gz 954.6 MB
EGAF00002798658 fastq.gz 983.4 MB
EGAF00002798659 fastq.gz 931.9 MB
EGAF00002798660 fastq.gz 956.3 MB
EGAF00002798661 fastq.gz 991.7 MB
EGAF00002798662 fastq.gz 1.0 GB
EGAF00002798663 fastq.gz 851.4 MB
EGAF00002798664 fastq.gz 871.2 MB
EGAF00002798665 fastq.gz 789.1 MB
EGAF00002798666 fastq.gz 809.5 MB
EGAF00002798667 fastq.gz 807.4 MB
EGAF00002798668 fastq.gz 836.2 MB
EGAF00002798669 fastq.gz 918.4 MB
EGAF00002798670 fastq.gz 947.2 MB
EGAF00002798671 fastq.gz 866.0 MB
EGAF00002798672 fastq.gz 892.3 MB
EGAF00002798673 fastq.gz 915.1 MB
EGAF00002798674 fastq.gz 945.5 MB
EGAF00002798675 fastq.gz 954.3 MB
EGAF00002798676 fastq.gz 992.5 MB
EGAF00002798677 fastq.gz 902.4 MB
EGAF00002798678 fastq.gz 931.4 MB
EGAF00002798679 fastq.gz 912.2 MB
EGAF00002798680 fastq.gz 934.8 MB
EGAF00002798681 fastq.gz 831.8 MB
EGAF00002798682 fastq.gz 866.2 MB
EGAF00002798683 fastq.gz 788.4 MB
EGAF00002798684 fastq.gz 809.2 MB
EGAF00002798685 fastq.gz 822.8 MB
EGAF00002798686 fastq.gz 863.9 MB
EGAF00002798687 fastq.gz 873.9 MB
EGAF00002798688 fastq.gz 893.3 MB
EGAF00002798689 fastq.gz 767.0 MB
EGAF00002798690 fastq.gz 790.6 MB
EGAF00002798691 fastq.gz 299.4 MB
EGAF00002798692 fastq.gz 264.1 MB
EGAF00002798693 fastq.gz 205.3 MB
EGAF00002798694 fastq.gz 207.1 MB
EGAF00002798695 fastq.gz 297.6 MB
EGAF00002798696 fastq.gz 191.8 MB
EGAF00002798697 fastq.gz 197.8 MB
EGAF00002798698 fastq.gz 288.6 MB
EGAF00002798699 fastq.gz 337.3 MB
EGAF00002798700 fastq.gz 306.7 MB
EGAF00002798701 fastq.gz 159.5 MB
EGAF00002798702 fastq.gz 318.1 MB
EGAF00002798703 fastq.gz 405.1 MB
EGAF00002798704 fastq.gz 364.5 MB
EGAF00002798705 fastq.gz 168.3 MB
EGAF00002798706 fastq.gz 187.6 MB
EGAF00002798707 fastq.gz 179.7 MB
EGAF00002798708 fastq.gz 206.3 MB
EGAF00002798709 fastq.gz 321.2 MB
EGAF00002798710 fastq.gz 317.7 MB
EGAF00002798711 fastq.gz 132.8 MB
EGAF00002798712 fastq.gz 195.9 MB
EGAF00002798713 fastq.gz 347.9 MB
EGAF00002798714 fastq.gz 263.4 MB
EGAF00002798715 fastq.gz 187.5 MB
EGAF00002798716 fastq.gz 215.1 MB
EGAF00002798717 fastq.gz 124.1 MB
EGAF00002798718 fastq.gz 184.5 MB
EGAF00002798719 fastq.gz 197.6 MB
EGAF00002798720 fastq.gz 119.8 MB
EGAF00002798721 fastq.gz 172.0 MB
EGAF00002798722 fastq.gz 286.3 MB
EGAF00002798723 fastq.gz 194.4 MB
EGAF00002798724 fastq.gz 28.8 MB
EGAF00002798725 fastq.gz 148.3 MB
EGAF00002798726 fastq.gz 202.6 MB
EGAF00002798727 fastq.gz 366.7 MB
EGAF00002798728 fastq.gz 368.0 MB
EGAF00002798729 fastq.gz 1.3 GB
EGAF00002798730 fastq.gz 192.6 MB
EGAF00002798731 fastq.gz 169.9 MB
EGAF00002798732 fastq.gz 308.0 MB
EGAF00002798733 fastq.gz 296.8 MB
EGAF00002798734 fastq.gz 358.8 MB
EGAF00002798735 fastq.gz 352.7 MB
EGAF00002798736 fastq.gz 268.3 MB
EGAF00002798737 fastq.gz 733.8 MB
EGAF00002798738 fastq.gz 745.7 MB
EGAF00002798739 fastq.gz 964.9 MB
EGAF00002798740 fastq.gz 1.1 GB
EGAF00002798741 fastq.gz 691.8 MB
EGAF00002798742 fastq.gz 728.8 MB
EGAF00002798743 fastq.gz 742.5 MB
EGAF00002798744 fastq.gz 761.0 MB
EGAF00002798745 fastq.gz 740.0 MB
EGAF00002798746 fastq.gz 759.6 MB
EGAF00002798747 fastq.gz 677.9 MB
EGAF00002798748 fastq.gz 702.0 MB
EGAF00002798749 fastq.gz 817.9 MB
EGAF00002798750 fastq.gz 830.9 MB
EGAF00002798751 fastq.gz 664.9 MB
EGAF00002798752 fastq.gz 676.1 MB
EGAF00002798753 fastq.gz 658.8 MB
EGAF00002798754 fastq.gz 680.5 MB
EGAF00002798755 fastq.gz 1.1 GB
EGAF00002798756 fastq.gz 1.1 GB
EGAF00002798757 fastq.gz 671.6 MB
EGAF00002798758 fastq.gz 691.7 MB
EGAF00002798759 fastq.gz 597.0 MB
EGAF00002798760 fastq.gz 609.8 MB
EGAF00002798761 fastq.gz 681.0 MB
EGAF00002798762 fastq.gz 693.8 MB
EGAF00002798763 fastq.gz 614.7 MB
EGAF00002798764 fastq.gz 626.2 MB
EGAF00002798765 fastq.gz 670.9 MB
EGAF00002798766 fastq.gz 701.8 MB
EGAF00002798767 fastq.gz 718.2 MB
EGAF00002798768 fastq.gz 731.4 MB
EGAF00002798769 fastq.gz 549.3 MB
EGAF00002798770 fastq.gz 563.7 MB
EGAF00002798771 fastq.gz 572.9 MB
EGAF00002798772 fastq.gz 587.1 MB
EGAF00002798773 fastq.gz 625.0 MB
EGAF00002798774 fastq.gz 643.0 MB
EGAF00002798775 fastq.gz 626.6 MB
EGAF00002798776 fastq.gz 675.0 MB
EGAF00002798777 fastq.gz 628.9 MB
EGAF00002798778 fastq.gz 643.0 MB
EGAF00002798779 fastq.gz 695.0 MB
EGAF00002798780 fastq.gz 717.1 MB
EGAF00002798781 fastq.gz 683.0 MB
EGAF00002798782 fastq.gz 699.7 MB
EGAF00002798783 fastq.gz 694.7 MB
EGAF00002798784 fastq.gz 719.6 MB
EGAF00002798785 fastq.gz 647.3 MB
EGAF00002798786 fastq.gz 659.5 MB
EGAF00002798787 fastq.gz 585.5 MB
EGAF00002798788 fastq.gz 606.2 MB
EGAF00002798789 fastq.gz 571.0 MB
EGAF00002798790 fastq.gz 581.9 MB
EGAF00002798791 fastq.gz 627.3 MB
EGAF00002798792 fastq.gz 641.5 MB
EGAF00002798793 fastq.gz 596.8 MB
EGAF00002798794 fastq.gz 622.9 MB
EGAF00002798795 fastq.gz 557.2 MB
EGAF00002798796 fastq.gz 575.2 MB
EGAF00002798797 fastq.gz 589.9 MB
EGAF00002798798 fastq.gz 602.6 MB
EGAF00002798799 fastq.gz 579.6 MB
EGAF00002798800 fastq.gz 589.6 MB
EGAF00002798801 fastq.gz 583.1 MB
EGAF00002798802 fastq.gz 595.8 MB
EGAF00002798803 fastq.gz 347.3 MB
EGAF00002798804 fastq.gz 354.9 MB
EGAF00002798805 fastq.gz 370.8 MB
EGAF00002798806 fastq.gz 380.4 MB
EGAF00002798807 fastq.gz 359.6 MB
EGAF00002798808 fastq.gz 365.8 MB
EGAF00002798809 fastq.gz 376.8 MB
EGAF00002798810 fastq.gz 382.3 MB
EGAF00002798811 fastq.gz 372.4 MB
EGAF00002798812 fastq.gz 378.8 MB
EGAF00002798813 fastq.gz 358.8 MB
EGAF00002798814 fastq.gz 368.1 MB
EGAF00002798815 fastq.gz 399.4 MB
EGAF00002798816 fastq.gz 407.4 MB
EGAF00002798817 fastq.gz 404.7 MB
EGAF00002798818 fastq.gz 413.3 MB
EGAF00002798819 fastq.gz 371.1 MB
EGAF00002798820 fastq.gz 377.6 MB
EGAF00002798821 fastq.gz 420.7 MB
EGAF00002798822 fastq.gz 429.7 MB
EGAF00002798823 fastq.gz 409.3 MB
EGAF00002798824 fastq.gz 430.3 MB
EGAF00002798825 fastq.gz 366.6 MB
EGAF00002798826 fastq.gz 376.6 MB
EGAF00002798827 fastq.gz 493.3 MB
EGAF00002798828 fastq.gz 507.9 MB
EGAF00002798829 fastq.gz 37.8 MB
EGAF00002798830 fastq.gz 39.7 MB
EGAF00002798831 fastq.gz 448.0 MB
EGAF00002798832 fastq.gz 456.8 MB
EGAF00002798833 fastq.gz 236.5 MB
EGAF00002798834 fastq.gz 242.4 MB
EGAF00002798835 fastq.gz 427.9 MB
EGAF00002798836 fastq.gz 436.2 MB
EGAF00002798837 fastq.gz 308.4 MB
EGAF00002798838 fastq.gz 316.8 MB
EGAF00002798839 fastq.gz 367.6 MB
EGAF00002798840 fastq.gz 373.0 MB
EGAF00002798841 fastq.gz 373.4 MB
EGAF00002798842 fastq.gz 381.2 MB
EGAF00002798843 fastq.gz 386.9 MB
EGAF00002798844 fastq.gz 396.8 MB
EGAF00002798845 fastq.gz 355.2 MB
EGAF00002798846 fastq.gz 365.6 MB
EGAF00002798847 fastq.gz 409.2 MB
EGAF00002798848 fastq.gz 417.4 MB
EGAF00002798849 fastq.gz 554.5 MB
EGAF00002798850 fastq.gz 597.8 MB
EGAF00002798851 fastq.gz 564.5 MB
EGAF00002798852 fastq.gz 613.2 MB
EGAF00002798853 fastq.gz 576.2 MB
EGAF00002798854 fastq.gz 623.5 MB
EGAF00002798855 fastq.gz 615.1 MB
EGAF00002798856 fastq.gz 664.5 MB
EGAF00002798857 fastq.gz 550.3 MB
EGAF00002798858 fastq.gz 592.7 MB
EGAF00002798859 fastq.gz 447.4 MB
EGAF00002798860 fastq.gz 487.0 MB
EGAF00002798861 fastq.gz 506.1 MB
EGAF00002798862 fastq.gz 560.7 MB
EGAF00002798863 fastq.gz 531.7 MB
EGAF00002798864 fastq.gz 580.3 MB
EGAF00002798865 fastq.gz 442.9 MB
EGAF00002798866 fastq.gz 488.2 MB
EGAF00002798867 fastq.gz 687.6 MB
EGAF00002798868 fastq.gz 744.5 MB
EGAF00002798869 fastq.gz 2.5 GB
EGAF00002798870 fastq.gz 2.9 GB
EGAF00002798871 fastq.gz 592.2 MB
EGAF00002798872 fastq.gz 637.9 MB
EGAF00002798873 fastq.gz 753.2 MB
EGAF00002798874 fastq.gz 817.0 MB
EGAF00002798875 fastq.gz 148.7 MB
EGAF00002798876 fastq.gz 170.1 MB
EGAF00002798877 fastq.gz 631.3 MB
EGAF00002798878 fastq.gz 688.2 MB
EGAF00002798879 fastq.gz 644.1 MB
EGAF00002798880 fastq.gz 698.8 MB
EGAF00002798881 fastq.gz 326.5 MB
EGAF00002798882 fastq.gz 360.5 MB
EGAF00002798883 fastq.gz 379.8 MB
EGAF00002798884 fastq.gz 414.7 MB
EGAF00002798885 fastq.gz 571.5 MB
EGAF00002798886 fastq.gz 623.2 MB
EGAF00002798887 fastq.gz 479.6 MB
EGAF00002798888 fastq.gz 539.4 MB
EGAF00002798889 fastq.gz 420.6 MB
EGAF00002798890 fastq.gz 457.2 MB
EGAF00002798891 fastq.gz 265.4 MB
EGAF00002798892 fastq.gz 298.8 MB
EGAF00002798893 fastq.gz 468.7 MB
EGAF00002798894 fastq.gz 505.2 MB
EGAF00002798895 fastq.gz 791.6 MB
EGAF00002798896 fastq.gz 825.0 MB
314 Files (192.6 GB)