About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Whole genome sequencing of Cas9 repaired cystic fibrosis organoids description

Three SpCas9-ABE (R785X/R785X) and three xCas9-ABE-repaired organoid clones (F508del/R553X) and their respective unrepaired control organoids were paired-end whole genome sequenced using Illumina Novaseq 6000 system. The reads were mapped to hg19 genome assembly and data is provided as BAM files.

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DUO:0000007
version: 2019-01-07

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0006517

The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes.

Please contact the DAC for the most up to date policies.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003951 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002799944 bam 46.4 GB
EGAF00002799945 bam 44.9 GB
EGAF00002799946 bam 41.8 GB
EGAF00002799947 bam 47.4 GB
EGAF00002799948 bam 53.3 GB
EGAF00002799949 bam 44.7 GB
EGAF00002799950 bam 40.2 GB
EGAF00002799951 bam 43.5 GB
8 Files (362.3 GB)