WGS of human colorectal cancer organoid exposed to genotoxic pks+ E. coli
Organoid cultures were exposed to two different E.Coli strains and a dye control with three biological duplicates. Their original culture was harvested as a control. In total 10 organoid cultures were whole-genome sequenced using the Novaseq6000 platforms. The data is deposited as .bam format.
- 20 samples
- DAC: EGAC00001001864
- Technology: Illumina NovaSeq 6000
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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002799058 | bam | 47.1 GB | ||
| EGAF00002799059 | bam | 52.4 GB | ||
| EGAF00002799060 | bam | 46.9 GB | ||
| EGAF00002799061 | bam | 40.5 GB | ||
| EGAF00002799062 | bam | 71.7 GB | ||
| EGAF00002799063 | bam | 42.3 GB | ||
| EGAF00002799064 | bam | 40.6 GB | ||
| EGAF00002799065 | bam | 43.2 GB | ||
| EGAF00002799066 | bam | 46.1 GB | ||
| EGAF00002799067 | bam | 39.1 GB | ||
| EGAF00003446953 | bam | 43.3 GB | ||
| EGAF00003446954 | bam | 43.9 GB | ||
| EGAF00003446955 | bam | 39.3 GB | ||
| EGAF00003446956 | bam | 51.3 GB | ||
| EGAF00003446957 | bam | 45.6 GB | ||
| EGAF00003446958 | bam | 55.4 GB | ||
| EGAF00003446959 | bam | 44.2 GB | ||
| EGAF00003446960 | bam | 55.0 GB | ||
| EGAF00003446961 | bam | 48.2 GB | ||
| EGAF00003446962 | bam | 48.5 GB | ||
| 20 Files (944.6 GB) | ||||