Targeted gene panel sequencing of matched diagnosis-remission-relapse B cell precursor acute lymphoblastic leukemia samples
Bone marrow mononuclear cells from patients diagnosed with B cell precursor acute lymphoblastic leukemia were obtained at three sequential time points: first diagnosis, remission after chemotherapy and relapse. Genomic DNA was isolated and targeted gene panel sequencing was performed using a customized biotinylated RNA oligo pool (SureSelect, Agilent, Santa Clara, California) to hybridize the target regions comprising 362 kbp on a HiSeq2000. Target regions were selected to validate mutations previously identified in these samples using whole exome sequencing.
- 150 samples
- DAC: EGAC00001001181
- Technology: Illumina HiSeq 2000
Data will be made available for well defined research-purposes in a form which does not allow re-identification of individuals. Recipients are required to adhere to the Data Transfer Agreement.
Data will be made available for well defined research-purposes in a form which does not allow re-identification of individuals. Recipients are required to adhere to the Data Transfer Agreement.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002447974 | bam | 3.5 GB | ||
| EGAF00002447975 | bam | 2.2 GB | ||
| EGAF00002447976 | bam | 3.6 GB | ||
| EGAF00002447977 | bam | 3.6 GB | ||
| EGAF00002447978 | bam | 1.8 GB | ||
| EGAF00002447979 | bam | 4.1 GB | ||
| EGAF00002447980 | bam | 5.4 GB | ||
| EGAF00002447981 | bam | 8.3 GB | ||
| EGAF00002447982 | bam | 6.1 GB | ||
| EGAF00002447983 | bam | 3.6 GB | ||
| EGAF00002447984 | bam | 7.2 GB | ||
| EGAF00002447985 | bam | 4.7 GB | ||
| EGAF00002447986 | bam | 1.8 GB | ||
| EGAF00002447987 | bam | 2.0 GB | ||
| EGAF00002447988 | bam | 2.7 GB | ||
| EGAF00002447989 | bam | 3.2 GB | ||
| EGAF00002447990 | bam | 3.9 GB | ||
| EGAF00002447991 | bam | 5.2 GB | ||
| EGAF00002447992 | bam | 1.7 GB | ||
| EGAF00002447993 | bam | 1.7 GB | ||
| EGAF00002447994 | bam | 2.0 GB | ||
| EGAF00002447995 | bam | 1.4 GB | ||
| EGAF00002447996 | bam | 2.5 GB | ||
| EGAF00002447997 | bam | 2.8 GB | ||
| EGAF00002447998 | bam | 3.9 GB | ||
| EGAF00002447999 | bam | 8.4 GB | ||
| EGAF00002448000 | bam | 3.3 GB | ||
| EGAF00002448001 | bam | 1.9 GB | ||
| EGAF00002448002 | bam | 3.5 GB | ||
| EGAF00002448003 | bam | 2.5 GB | ||
| EGAF00002448004 | bam | 1.7 GB | ||
| EGAF00002448005 | bam | 1.8 GB | ||
| EGAF00002448006 | bam | 3.3 GB | ||
| EGAF00002448007 | bam | 1.8 GB | ||
| EGAF00002448008 | bam | 9.9 GB | ||
| EGAF00002448009 | bam | 2.5 GB | ||
| EGAF00002448010 | bam | 1.5 GB | ||
| EGAF00002448011 | bam | 1.9 GB | ||
| EGAF00002448012 | bam | 2.6 GB | ||
| EGAF00002448013 | bam | 1.7 GB | ||
| EGAF00002448014 | bam | 1.6 GB | ||
| EGAF00002448015 | bam | 2.6 GB | ||
| EGAF00002448016 | bam | 1.6 GB | ||
| EGAF00002448017 | bam | 1.7 GB | ||
| EGAF00002448018 | bam | 2.9 GB | ||
| EGAF00002448019 | bam | 2.3 GB | ||
| EGAF00002448020 | bam | 2.8 GB | ||
| EGAF00002448021 | bam | 3.1 GB | ||
| EGAF00002448022 | bam | 3.6 GB | ||
| EGAF00002448023 | bam | 1.3 GB | ||
| EGAF00002448024 | bam | 2.4 GB | ||
| EGAF00002448025 | bam | 4.6 GB | ||
| EGAF00002448026 | bam | 8.2 GB | ||
| EGAF00002448027 | bam | 3.7 GB | ||
| EGAF00002448028 | bam | 2.0 GB | ||
| EGAF00002448029 | bam | 1.8 GB | ||
| EGAF00002448030 | bam | 2.3 GB | ||
| EGAF00002448031 | bam | 1.9 GB | ||
| EGAF00002448032 | bam | 2.1 GB | ||
| EGAF00002448033 | bam | 2.2 GB | ||
| EGAF00002448034 | bam | 1.7 GB | ||
| EGAF00002448035 | bam | 2.8 GB | ||
| EGAF00002448036 | bam | 2.1 GB | ||
| EGAF00002448037 | bam | 2.4 GB | ||
| EGAF00002448038 | bam | 1.8 GB | ||
| EGAF00002448039 | bam | 3.5 GB | ||
| EGAF00002448040 | bam | 2.9 GB | ||
| EGAF00002448041 | bam | 1.6 GB | ||
| EGAF00002448042 | bam | 1.7 GB | ||
| EGAF00002448043 | bam | 1.3 GB | ||
| EGAF00002448044 | bam | 1.5 GB | ||
| EGAF00002448045 | bam | 3.7 GB | ||
| EGAF00002448046 | bam | 3.5 GB | ||
| EGAF00002448047 | bam | 2.6 GB | ||
| EGAF00002448048 | bam | 2.3 GB | ||
| EGAF00002448049 | bam | 1.9 GB | ||
| EGAF00002448050 | bam | 1.4 GB | ||
| EGAF00002448051 | bam | 2.9 GB | ||
| EGAF00002448052 | bam | 1.5 GB | ||
| EGAF00002448053 | bam | 3.1 GB | ||
| EGAF00002448054 | bam | 2.3 GB | ||
| EGAF00002448055 | bam | 2.2 GB | ||
| EGAF00002448056 | bam | 1.9 GB | ||
| EGAF00002448057 | bam | 2.7 GB | ||
| EGAF00002448058 | bam | 2.1 GB | ||
| EGAF00002448059 | bam | 1.7 GB | ||
| EGAF00002448060 | bam | 3.4 GB | ||
| EGAF00002448061 | bam | 2.1 GB | ||
| EGAF00002448062 | bam | 2.4 GB | ||
| EGAF00002448063 | bam | 2.1 GB | ||
| EGAF00002448064 | bam | 1.9 GB | ||
| EGAF00002448065 | bam | 2.1 GB | ||
| EGAF00002448066 | bam | 2.1 GB | ||
| EGAF00002448067 | bam | 1.6 GB | ||
| EGAF00002448068 | bam | 2.7 GB | ||
| EGAF00002448069 | bam | 2.2 GB | ||
| EGAF00002448070 | bam | 2.5 GB | ||
| EGAF00002448071 | bam | 2.3 GB | ||
| EGAF00002448072 | bam | 2.1 GB | ||
| EGAF00002448073 | bam | 2.1 GB | ||
| EGAF00002448074 | bam | 2.9 GB | ||
| EGAF00002448075 | bam | 2.0 GB | ||
| EGAF00002448076 | bam | 3.0 GB | ||
| EGAF00002448077 | bam | 3.3 GB | ||
| EGAF00002448078 | bam | 1.9 GB | ||
| EGAF00002448079 | bam | 2.5 GB | ||
| EGAF00002448080 | bam | 1.7 GB | ||
| EGAF00002448081 | bam | 1.6 GB | ||
| EGAF00002448082 | bam | 2.7 GB | ||
| EGAF00002448083 | bam | 1.8 GB | ||
| EGAF00002448084 | bam | 1.8 GB | ||
| EGAF00002448085 | bam | 2.5 GB | ||
| EGAF00002448086 | bam | 3.1 GB | ||
| EGAF00002448087 | bam | 2.7 GB | ||
| EGAF00002448088 | bam | 3.7 GB | ||
| EGAF00002448089 | bam | 4.4 GB | ||
| EGAF00002448090 | bam | 2.1 GB | ||
| EGAF00002448091 | bam | 4.6 GB | ||
| EGAF00002448092 | bam | 6.0 GB | ||
| EGAF00002448093 | bam | 4.1 GB | ||
| EGAF00002448094 | bam | 2.0 GB | ||
| EGAF00002448095 | bam | 2.1 GB | ||
| EGAF00002448096 | bam | 2.5 GB | ||
| EGAF00002448097 | bam | 3.0 GB | ||
| EGAF00002448098 | bam | 1.6 GB | ||
| EGAF00002448099 | bam | 2.6 GB | ||
| EGAF00002448100 | bam | 1.8 GB | ||
| EGAF00002448101 | bam | 3.3 GB | ||
| EGAF00002448102 | bam | 4.8 GB | ||
| EGAF00002448103 | bam | 3.7 GB | ||
| EGAF00002448104 | bam | 1.4 GB | ||
| EGAF00002448105 | bam | 4.6 GB | ||
| EGAF00002448106 | bam | 2.1 GB | ||
| EGAF00002448107 | bam | 1.9 GB | ||
| EGAF00002448108 | bam | 4.9 GB | ||
| EGAF00002448109 | bam | 3.2 GB | ||
| EGAF00002448110 | bam | 3.3 GB | ||
| EGAF00002448111 | bam | 11.1 GB | ||
| EGAF00002448112 | bam | 3.0 GB | ||
| EGAF00002448113 | bam | 1.7 GB | ||
| EGAF00002448114 | bam | 1.1 GB | ||
| EGAF00002448115 | bam | 2.1 GB | ||
| EGAF00002448116 | bam | 1.1 GB | ||
| EGAF00002448117 | bam | 1.4 GB | ||
| EGAF00002448118 | bam | 2.5 GB | ||
| EGAF00002448119 | bam | 1.6 GB | ||
| EGAF00002448120 | bam | 1.5 GB | ||
| EGAF00002448121 | bam | 2.3 GB | ||
| EGAF00002448122 | bam | 1.6 GB | ||
| EGAF00002448123 | bam | 1.6 GB | ||
| 150 Files (421.5 GB) | ||||