Genetic vulnerability of knockout cancer lines (2019-04-01)
Genome-wide CRISPR/Cas9 library screen was performed in isogenic cell lines. Three biological replicates were used. Cells were harvested at initiation of screen and at specific time points following cell culture. Using this approach we aim to identify genes specifically important in cell survival in engineered cell lines. Please perform 72, instead of 36, PCR reactions as the screen performed at 200x coverage. . This dataset contains all the data available for this study on 2019-04-01.
- 18 samples
- DAC: EGAC00001000205
- Technology: Illumina HiSeq 2500
Wellcome Trust Sanger Institute Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001995379 | cram | 299.2 MB | ||
| EGAF00001995380 | cram | 283.4 MB | ||
| EGAF00001995381 | cram | 312.8 MB | ||
| EGAF00001995382 | cram | 302.8 MB | ||
| EGAF00001995383 | cram | 260.6 MB | ||
| EGAF00001995384 | cram | 285.8 MB | ||
| EGAF00001995385 | cram | 299.4 MB | ||
| EGAF00001995386 | cram | 283.7 MB | ||
| EGAF00001995387 | cram | 313.5 MB | ||
| EGAF00001995388 | cram | 303.4 MB | ||
| EGAF00001995389 | cram | 260.8 MB | ||
| EGAF00001995390 | cram | 286.0 MB | ||
| EGAF00001995391 | cram | 350.5 MB | ||
| EGAF00001995392 | cram | 329.9 MB | ||
| EGAF00001995393 | cram | 310.4 MB | ||
| EGAF00001995394 | cram | 358.3 MB | ||
| EGAF00001995395 | cram | 324.8 MB | ||
| EGAF00001995396 | cram | 328.4 MB | ||
| EGAF00001995397 | cram | 360.1 MB | ||
| EGAF00001995398 | cram | 338.7 MB | ||
| EGAF00001995399 | cram | 319.4 MB | ||
| EGAF00001995400 | cram | 368.4 MB | ||
| EGAF00001995401 | cram | 334.3 MB | ||
| EGAF00001995402 | cram | 336.6 MB | ||
| EGAF00001995403 | cram | 301.3 MB | ||
| EGAF00001995404 | cram | 340.3 MB | ||
| EGAF00001995405 | cram | 301.8 MB | ||
| EGAF00001995406 | cram | 294.7 MB | ||
| EGAF00001995407 | cram | 314.5 MB | ||
| EGAF00001995453 | cram | 290.3 MB | ||
| EGAF00001995454 | cram | 300.0 MB | ||
| EGAF00001995455 | cram | 339.2 MB | ||
| EGAF00001995456 | cram | 301.2 MB | ||
| EGAF00001995457 | cram | 293.8 MB | ||
| EGAF00001995458 | cram | 314.3 MB | ||
| EGAF00001995459 | cram | 289.1 MB | ||
| 36 Files (11.2 GB) | ||||