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Utility of ctDNA to support patient selection for early phase clinical trials: The TARGET Study

The TARGET Study consists of 200 BAM files, for the 100 patients discussed in the publication. Each patient has a normal control BAM file and a ctDNA BAM file.

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CRUK Clinical and Experimental Pharmacology Group (CEP) EGA Policy for The TARGET Study.

CR-UK Manchester Institute Clinical and Experimental Pharmacology Group DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the genomic data generated by the Clinical and Experimental Pharmacology Laboratory, CR-UK Manchester Institute. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly. Definitions: CEP means the Clinical and Experimental Pharmacology Laboratory, a CR-UK funded laboratory within the CR-UK Manchester Institute. Data means all and any human genetic data obtained from CEP. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to abide by the terms outlined in the 'Publications Policy' as set out in Schedule 1. 9. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of CEP and the relevant primary collectors and their funders. Suitable wording is provided in the Publications Policy given in Schedule 1. 10. You accept that CEP, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 11. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 12. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 13. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 14. You accept that it may be necessary for CEP or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, CEP or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 15. You agree that you will submit a report to the Data Access Committee, if requested, on completion of the agreed purpose. The Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 16. You accept that the Data is protected by and subject to international laws, including but not limited to the UK Data Protection Act 1998, and that You are responsible for ensuring compliance with any such applicable law. The Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA. 17. This agreement shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the non-exclusive jurisdiction of the English courts. SCHEDULE 1 Publications Policy The primary aim of CEP is to gain a greater understanding of the fundamental basis of how cancer develops and apply that knowledge to develop new diagnostic tests, potential treatments and better ways to predict the outcomes. Authors who use data from the project must acknowledge CEP using the following wording "This study makes use of data generated by Clinical and Experimental Pharmacology Group, CR-UK Manchester Institute (http://www.cruk.manchester.ac.uk). Funding for the project was provided by core funding to CRUK Manchester Institute (C5759/A27412), the Manchester CRUK Centre Award (C5759/A25254) and via the CRUK Manchester Experimental Cancer Medicines Centre (A20465)" and cite the relevant primary publication. Users should note that CEP bears no responsibility for the further analysis or interpretation of these data, over and above that published by CEP.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002398888 bam 24.7 GB
EGAF00002398889 bam 75.9 GB
EGAF00002398890 bam 18.7 GB
EGAF00002398891 bam 50.2 GB
EGAF00002398892 bam 20.7 GB
EGAF00002398893 bam 51.6 GB
EGAF00002398894 bam 18.1 GB
EGAF00002398895 bam 59.2 GB
EGAF00002398896 bam 20.4 GB
EGAF00002398897 bam 60.9 GB
EGAF00002398898 bam 17.4 GB
EGAF00002398899 bam 45.4 GB
EGAF00002398900 bam 23.5 GB
EGAF00002398901 bam 68.1 GB
EGAF00002398902 bam 20.6 GB
EGAF00002398903 bam 50.2 GB
EGAF00002398904 bam 16.5 GB
EGAF00002398905 bam 30.1 GB
EGAF00002398906 bam 11.1 GB
EGAF00002398907 bam 33.4 GB
EGAF00002398908 bam 8.4 GB
EGAF00002398909 bam 19.3 GB
EGAF00002398910 bam 14.9 GB
EGAF00002398911 bam 32.6 GB
EGAF00002398912 bam 18.3 GB
EGAF00002398913 bam 52.9 GB
EGAF00002398914 bam 14.7 GB
EGAF00002398915 bam 41.6 GB
EGAF00002398916 bam 8.3 GB
EGAF00002398917 bam 27.2 GB
EGAF00002398918 bam 11.9 GB
EGAF00002398919 bam 31.3 GB
EGAF00002398920 bam 18.2 GB
EGAF00002398921 bam 41.4 GB
EGAF00002398922 bam 20.7 GB
EGAF00002398923 bam 49.3 GB
EGAF00002398924 bam 9.8 GB
EGAF00002398925 bam 30.2 GB
EGAF00002398926 bam 14.0 GB
EGAF00002398927 bam 31.3 GB
EGAF00002398928 bam 37.7 GB
EGAF00002398929 bam 24.1 GB
EGAF00002398930 bam 31.2 GB
EGAF00002398931 bam 35.1 GB
EGAF00002398932 bam 29.8 GB
EGAF00002398933 bam 30.5 GB
EGAF00002398934 bam 14.4 GB
EGAF00002398935 bam 8.2 GB
EGAF00002398936 bam 8.7 GB
EGAF00002398937 bam 7.8 GB
EGAF00002398938 bam 28.3 GB
EGAF00002398939 bam 26.4 GB
EGAF00002398940 bam 9.9 GB
EGAF00002398941 bam 8.7 GB
EGAF00002398942 bam 12.7 GB
EGAF00002398943 bam 10.1 GB
EGAF00002398944 bam 26.6 GB
EGAF00002398945 bam 12.4 GB
EGAF00002398946 bam 10.9 GB
EGAF00002398947 bam 6.5 GB
EGAF00002398948 bam 11.8 GB
EGAF00002398949 bam 6.4 GB
EGAF00002398950 bam 22.8 GB
EGAF00002398951 bam 14.3 GB
EGAF00002398952 bam 16.1 GB
EGAF00002398953 bam 14.8 GB
EGAF00002398954 bam 32.3 GB
EGAF00002398955 bam 22.3 GB
EGAF00002398956 bam 13.7 GB
EGAF00002398957 bam 12.0 GB
EGAF00002398958 bam 17.1 GB
EGAF00002398959 bam 15.3 GB
EGAF00002398960 bam 29.6 GB
EGAF00002398961 bam 23.2 GB
EGAF00002398962 bam 15.3 GB
EGAF00002398963 bam 9.2 GB
EGAF00002398964 bam 12.9 GB
EGAF00002398965 bam 10.2 GB
EGAF00002398966 bam 14.3 GB
EGAF00002398967 bam 10.5 GB
EGAF00002398968 bam 14.2 GB
EGAF00002398969 bam 10.3 GB
EGAF00002398970 bam 16.4 GB
EGAF00002398971 bam 14.3 GB
EGAF00002398972 bam 15.5 GB
EGAF00002398973 bam 11.7 GB
EGAF00002398974 bam 16.3 GB
EGAF00002398975 bam 12.9 GB
EGAF00002398976 bam 12.1 GB
EGAF00002398977 bam 9.7 GB
EGAF00002398978 bam 12.4 GB
EGAF00002398979 bam 7.7 GB
EGAF00002398980 bam 30.6 GB
EGAF00002398981 bam 8.3 GB
EGAF00002398982 bam 11.3 GB
EGAF00002398983 bam 9.6 GB
EGAF00002398984 bam 13.7 GB
EGAF00002398985 bam 11.7 GB
EGAF00002398986 bam 12.4 GB
EGAF00002398987 bam 14.0 GB
EGAF00002398988 bam 13.1 GB
EGAF00002398989 bam 9.2 GB
EGAF00002398990 bam 13.8 GB
EGAF00002398991 bam 9.5 GB
EGAF00002398992 bam 16.7 GB
EGAF00002398993 bam 12.3 GB
EGAF00002398994 bam 16.9 GB
EGAF00002398995 bam 11.4 GB
EGAF00002398996 bam 19.5 GB
EGAF00002398997 bam 13.2 GB
EGAF00002398998 bam 15.5 GB
EGAF00002398999 bam 17.2 GB
EGAF00002399000 bam 18.6 GB
EGAF00002399001 bam 12.5 GB
EGAF00002399002 bam 15.2 GB
EGAF00002399003 bam 13.9 GB
EGAF00002399004 bam 19.8 GB
EGAF00002399005 bam 10.8 GB
EGAF00002399006 bam 17.4 GB
EGAF00002399007 bam 12.2 GB
EGAF00002399008 bam 15.9 GB
EGAF00002399009 bam 11.6 GB
EGAF00002399010 bam 16.6 GB
EGAF00002399011 bam 13.7 GB
EGAF00002399012 bam 14.6 GB
EGAF00002399013 bam 12.9 GB
EGAF00002399014 bam 19.2 GB
EGAF00002399015 bam 13.5 GB
EGAF00002399016 bam 15.8 GB
EGAF00002399017 bam 12.3 GB
EGAF00002399018 bam 18.0 GB
EGAF00002399019 bam 11.2 GB
EGAF00002399020 bam 14.0 GB
EGAF00002399021 bam 10.0 GB
EGAF00002399022 bam 13.5 GB
EGAF00002399023 bam 9.3 GB
EGAF00002399024 bam 14.4 GB
EGAF00002399025 bam 10.9 GB
EGAF00002399026 bam 10.6 GB
EGAF00002399027 bam 8.7 GB
EGAF00002399028 bam 14.5 GB
EGAF00002399029 bam 8.5 GB
EGAF00002399030 bam 11.1 GB
EGAF00002399031 bam 7.9 GB
EGAF00002399032 bam 8.8 GB
EGAF00002399033 bam 7.0 GB
EGAF00002399034 bam 9.3 GB
EGAF00002399035 bam 7.8 GB
EGAF00002399036 bam 8.6 GB
EGAF00002399037 bam 6.2 GB
EGAF00002399038 bam 15.9 GB
EGAF00002399039 bam 11.7 GB
EGAF00002399040 bam 14.1 GB
EGAF00002399041 bam 9.9 GB
EGAF00002399042 bam 12.7 GB
EGAF00002399043 bam 9.1 GB
EGAF00002399044 bam 13.9 GB
EGAF00002399045 bam 8.0 GB
EGAF00002399046 bam 18.8 GB
EGAF00002399047 bam 13.4 GB
EGAF00002399048 bam 17.3 GB
EGAF00002399049 bam 11.7 GB
EGAF00002399050 bam 17.5 GB
EGAF00002399051 bam 14.2 GB
EGAF00002399052 bam 27.1 GB
EGAF00002399053 bam 15.5 GB
EGAF00002399054 bam 14.9 GB
EGAF00002399055 bam 10.2 GB
EGAF00002399056 bam 13.6 GB
EGAF00002399057 bam 9.6 GB
EGAF00002399058 bam 26.2 GB
EGAF00002399059 bam 20.0 GB
EGAF00002399060 bam 21.7 GB
EGAF00002399061 bam 10.5 GB
EGAF00002399062 bam 14.6 GB
EGAF00002399063 bam 10.1 GB
EGAF00002399064 bam 12.9 GB
EGAF00002399065 bam 10.8 GB
EGAF00002399066 bam 9.5 GB
EGAF00002399067 bam 9.1 GB
EGAF00002399068 bam 21.0 GB
EGAF00002399069 bam 11.6 GB
EGAF00002399070 bam 11.4 GB
EGAF00002399071 bam 7.7 GB
EGAF00002399072 bam 9.8 GB
EGAF00002399073 bam 10.5 GB
EGAF00002399074 bam 14.5 GB
EGAF00002399075 bam 8.8 GB
EGAF00002399076 bam 16.9 GB
EGAF00002399077 bam 11.7 GB
EGAF00002399078 bam 18.1 GB
EGAF00002399079 bam 11.9 GB
EGAF00002399080 bam 16.8 GB
EGAF00002399081 bam 11.0 GB
EGAF00002399082 bam 23.6 GB
EGAF00002399083 bam 14.5 GB
EGAF00002399084 bam 13.0 GB
EGAF00002399085 bam 10.8 GB
EGAF00002399086 bam 12.4 GB
EGAF00002399087 bam 12.2 GB
200 Files (3.5 TB)