MCO colorectal cancer genomics at UNSW
This dataset contains DNA sequencing data from 95 colorectal cancer and matched-normal samples. The dataset contains targeted deep sequencing of selected regulatory elements in 95 cancer and matched-normal samples, and data for one sample that was additionally whole-genome sequenced (cancer and matched-normal).
- 192 samples
- DAC: EGAC00001001122
- Technology: Illumina HiSeq 2000
- HMB DUO:0000006 (version: 2019-01-07)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2019-01-07)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
Data access policy for MCO study at UNSW
Datasets will be made available for research in biology and medicine upon approval by the DAC. File access: Data can be held in unencrypted files on an institutional compute system, with Unix user group read/write access for one or more appropriate groups but not Unix world read/write access behind a secure firewall. Laptops holding these data should have password protected logins and screenlocks (set to lock after 5 min of inactivity). If held on USB keys or other portable hard drives, the data must be encrypted. In any publications based on these data, please describe how the data can be accessed, including the name of the hosting database (e.g., The European Genome-phenome Archive at the European Bioinformatics Institute) and its accession numbers (e.g., EGAS00000000029), and acknowledge its use in a form agreed by the User Institution with ‘DAC for MCO colorectal cancer genomics at UNSW’.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS00001003450 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00002340511 | bam | 6.3 GB | ||
EGAF00002340512 | bam | 4.9 GB | ||
EGAF00002340513 | bam | 7.5 GB | ||
EGAF00002340514 | bam | 5.5 GB | ||
EGAF00002340515 | bam | 6.7 GB | ||
EGAF00002340516 | bam | 5.3 GB | ||
EGAF00002340517 | bam | 5.1 GB | ||
EGAF00002340518 | bam | 7.5 GB | ||
EGAF00002340519 | bam | 4.1 GB | ||
EGAF00002340520 | bam | 5.8 GB | ||
EGAF00002340521 | bam | 6.0 GB | ||
EGAF00002340522 | bam | 4.2 GB | ||
EGAF00002340523 | bam | 5.6 GB | ||
EGAF00002340524 | bam | 5.1 GB | ||
EGAF00002340525 | bam | 5.4 GB | ||
EGAF00002340526 | bam | 5.8 GB | ||
EGAF00002340527 | bam | 5.0 GB | ||
EGAF00002340528 | bam | 4.6 GB | ||
EGAF00002340529 | bam | 5.2 GB | ||
EGAF00002340530 | bam | 6.2 GB | ||
EGAF00002340531 | bam | 4.4 GB | ||
EGAF00002340532 | bam | 5.5 GB | ||
EGAF00002340533 | bam | 4.6 GB | ||
EGAF00002340534 | bam | 5.2 GB | ||
EGAF00002340535 | bam | 5.3 GB | ||
EGAF00002340536 | bam | 4.9 GB | ||
EGAF00002340537 | bam | 4.6 GB | ||
EGAF00002340538 | bam | 5.7 GB | ||
EGAF00002340539 | bam | 5.8 GB | ||
EGAF00002340540 | bam | 5.4 GB | ||
EGAF00002340541 | bam | 5.0 GB | ||
EGAF00002340542 | bam | 5.5 GB | ||
EGAF00002340543 | bam | 4.8 GB | ||
EGAF00002340544 | bam | 5.8 GB | ||
EGAF00002340545 | bam | 4.9 GB | ||
EGAF00002340546 | bam | 3.3 GB | ||
EGAF00002340547 | bam | 6.0 GB | ||
EGAF00002340548 | bam | 5.3 GB | ||
EGAF00002340549 | bam | 6.0 GB | ||
EGAF00002340550 | bam | 4.7 GB | ||
EGAF00002340551 | bam | 4.5 GB | ||
EGAF00002340552 | bam | 5.9 GB | ||
EGAF00002340553 | bam | 5.3 GB | ||
EGAF00002340554 | bam | 2.5 GB | ||
EGAF00002340555 | bam | 7.0 GB | ||
EGAF00002340556 | bam | 5.1 GB | ||
EGAF00002340557 | bam | 5.6 GB | ||
EGAF00002340558 | bam | 5.9 GB | ||
EGAF00002340559 | bam | 5.3 GB | ||
EGAF00002340560 | bam | 5.1 GB | ||
EGAF00002340561 | bam | 5.1 GB | ||
EGAF00002340562 | bam | 5.8 GB | ||
EGAF00002340563 | bam | 4.7 GB | ||
EGAF00002340564 | bam | 5.0 GB | ||
EGAF00002340565 | bam | 3.7 GB | ||
EGAF00002340566 | bam | 6.2 GB | ||
EGAF00002340567 | bam | 5.3 GB | ||
EGAF00002340568 | bam | 5.4 GB | ||
EGAF00002340569 | bam | 5.3 GB | ||
EGAF00002340570 | bam | 6.2 GB | ||
EGAF00002340571 | bam | 5.2 GB | ||
EGAF00002340572 | bam | 4.8 GB | ||
EGAF00002340573 | bam | 5.4 GB | ||
EGAF00002340574 | bam | 4.8 GB | ||
EGAF00002340575 | bam | 5.5 GB | ||
EGAF00002340576 | bam | 4.6 GB | ||
EGAF00002340577 | bam | 4.6 GB | ||
EGAF00002340578 | bam | 4.7 GB | ||
EGAF00002340579 | bam | 3.9 GB | ||
EGAF00002340580 | bam | 4.9 GB | ||
EGAF00002340581 | bam | 4.1 GB | ||
EGAF00002340582 | bam | 4.7 GB | ||
EGAF00002340583 | bam | 5.2 GB | ||
EGAF00002340584 | bam | 6.1 GB | ||
EGAF00002340585 | bam | 4.2 GB | ||
EGAF00002340586 | bam | 6.2 GB | ||
EGAF00002340587 | bam | 4.8 GB | ||
EGAF00002340588 | bam | 6.1 GB | ||
EGAF00002340589 | bam | 5.9 GB | ||
EGAF00002340590 | bam | 3.7 GB | ||
EGAF00002340591 | bam | 6.2 GB | ||
EGAF00002340592 | bam | 7.7 GB | ||
EGAF00002340593 | bam | 4.4 GB | ||
EGAF00002340594 | bam | 102.6 GB | ||
EGAF00002340595 | bam | 23.8 GB | ||
EGAF00002340596 | bam | 2.5 GB | ||
EGAF00002340597 | bam | 3.1 GB | ||
EGAF00002340598 | bam | 2.6 GB | ||
EGAF00002340599 | bam | 2.3 GB | ||
EGAF00002340600 | bam | 2.4 GB | ||
EGAF00002340601 | bam | 2.4 GB | ||
EGAF00002340602 | bam | 2.3 GB | ||
EGAF00002340603 | bam | 2.5 GB | ||
EGAF00002340604 | bam | 2.4 GB | ||
EGAF00002340605 | bam | 3.2 GB | ||
EGAF00002340606 | bam | 2.9 GB | ||
EGAF00002340607 | bam | 2.2 GB | ||
EGAF00002340608 | bam | 2.6 GB | ||
EGAF00002340609 | bam | 3.4 GB | ||
EGAF00002340610 | bam | 2.4 GB | ||
EGAF00002340611 | bam | 2.7 GB | ||
EGAF00002340612 | bam | 2.3 GB | ||
EGAF00002340613 | bam | 2.3 GB | ||
EGAF00002340614 | bam | 2.7 GB | ||
EGAF00002340615 | bam | 2.6 GB | ||
EGAF00002340616 | bam | 2.6 GB | ||
EGAF00002340617 | bam | 2.6 GB | ||
EGAF00002340618 | bam | 2.2 GB | ||
EGAF00002340619 | bam | 2.2 GB | ||
EGAF00002340620 | bam | 2.5 GB | ||
EGAF00002340621 | bam | 2.2 GB | ||
EGAF00002340622 | bam | 2.9 GB | ||
EGAF00002340623 | bam | 4.8 GB | ||
EGAF00002340624 | bam | 2.6 GB | ||
EGAF00002340625 | bam | 2.4 GB | ||
EGAF00002340626 | bam | 1.9 GB | ||
EGAF00002340627 | bam | 2.8 GB | ||
EGAF00002340628 | bam | 2.3 GB | ||
EGAF00002340629 | bam | 2.7 GB | ||
EGAF00002340630 | bam | 3.0 GB | ||
EGAF00002340631 | bam | 1.9 GB | ||
EGAF00002340632 | bam | 2.8 GB | ||
EGAF00002340633 | bam | 2.7 GB | ||
EGAF00002340634 | bam | 2.4 GB | ||
EGAF00002340635 | bam | 2.2 GB | ||
EGAF00002340636 | bam | 2.3 GB | ||
EGAF00002340637 | bam | 2.0 GB | ||
EGAF00002340638 | bam | 2.2 GB | ||
EGAF00002340639 | bam | 2.4 GB | ||
EGAF00002340640 | bam | 1.9 GB | ||
EGAF00002340641 | bam | 2.6 GB | ||
EGAF00002340642 | bam | 2.5 GB | ||
EGAF00002340643 | bam | 2.6 GB | ||
EGAF00002340644 | bam | 2.6 GB | ||
EGAF00002340645 | bam | 2.6 GB | ||
EGAF00002340646 | bam | 2.5 GB | ||
EGAF00002340647 | bam | 2.7 GB | ||
EGAF00002340648 | bam | 2.8 GB | ||
EGAF00002340649 | bam | 2.5 GB | ||
EGAF00002340650 | bam | 2.6 GB | ||
EGAF00002340651 | bam | 2.4 GB | ||
EGAF00002340652 | bam | 2.5 GB | ||
EGAF00002340653 | bam | 2.7 GB | ||
EGAF00002340654 | bam | 2.7 GB | ||
EGAF00002340655 | bam | 2.9 GB | ||
EGAF00002340656 | bam | 2.8 GB | ||
EGAF00002340657 | bam | 2.5 GB | ||
EGAF00002340658 | bam | 2.1 GB | ||
EGAF00002340659 | bam | 1.7 GB | ||
EGAF00002340660 | bam | 2.6 GB | ||
EGAF00002340661 | bam | 2.4 GB | ||
EGAF00002340662 | bam | 2.4 GB | ||
EGAF00002340663 | bam | 2.4 GB | ||
EGAF00002340664 | bam | 2.7 GB | ||
EGAF00002340665 | bam | 3.3 GB | ||
EGAF00002340666 | bam | 3.0 GB | ||
EGAF00002340667 | bam | 6.1 GB | ||
EGAF00002340668 | bam | 2.3 GB | ||
EGAF00002340669 | bam | 2.5 GB | ||
EGAF00002340670 | bam | 2.5 GB | ||
EGAF00002340671 | bam | 2.2 GB | ||
EGAF00002340672 | bam | 2.6 GB | ||
EGAF00002340673 | bam | 2.4 GB | ||
EGAF00002340674 | bam | 2.4 GB | ||
EGAF00002340675 | bam | 2.4 GB | ||
EGAF00002340676 | bam | 3.0 GB | ||
EGAF00002340677 | bam | 2.3 GB | ||
EGAF00002340678 | bam | 2.3 GB | ||
EGAF00002340679 | bam | 2.2 GB | ||
EGAF00002340680 | bam | 3.4 GB | ||
EGAF00002340681 | bam | 2.7 GB | ||
EGAF00002340682 | bam | 2.5 GB | ||
EGAF00002340683 | bam | 2.5 GB | ||
EGAF00002340684 | bam | 2.2 GB | ||
EGAF00002340685 | bam | 2.3 GB | ||
EGAF00002340686 | bam | 2.6 GB | ||
EGAF00002340687 | bam | 2.5 GB | ||
EGAF00002340688 | bam | 1.9 GB | ||
EGAF00002340689 | bam | 3.8 GB | ||
EGAF00002340690 | bam | 2.3 GB | ||
EGAF00002340691 | bam | 5.2 GB | ||
EGAF00002340692 | bam | 7.1 GB | ||
EGAF00002340693 | bam | 4.8 GB | ||
EGAF00002340694 | bam | 5.4 GB | ||
EGAF00002340695 | bam | 5.3 GB | ||
EGAF00002340696 | bam | 6.4 GB | ||
EGAF00002340697 | bam | 6.1 GB | ||
EGAF00002340698 | bam | 5.6 GB | ||
EGAF00002340699 | bam | 4.8 GB | ||
EGAF00002340700 | bam | 5.7 GB | ||
EGAF00002340701 | bam | 6.6 GB | ||
EGAF00002340702 | bam | 6.0 GB | ||
192 Files (878.2 GB) |