clonealign: direct library preparation+ single-cell DNA-sequencing

Direct library preparation+ single-cell DNA-sequencing of (i) patient derived triple negative breast cancer xenograft (ii) primary tumour and ascites ovarian cancer cell lines at tumour recurrence.

980 samples
DAC: EGAC00000000011
Technology: Illumina HiSeq 2500

Access Policy1 Study Files

Metadata

Request Access

NRES DUO:0000004 (version: 2019-01-07)no restrictionThis data use permission indicates there is no restriction on use.
RS DUO:0000012 (version: 2021-02-23)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
TS DUO:0000025 (version: 2021-02-23)time limit on useThis data use modifier indicates that use is approved for a specific number of months.

BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001003190	Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00002298782	bam	292.7 MB
EGAF00002298783	bam	220.7 MB
EGAF00002298784	bam	383.2 MB
EGAF00002298785	bam	1.4 MB
EGAF00002298786	bam	814.5 kB
EGAF00002298787	bam	393.8 MB
EGAF00002298788	bam	323.1 MB
EGAF00002298789	bam	219.3 MB
EGAF00002298790	bam	284.5 MB
EGAF00002298791	bam	275.1 MB
EGAF00002298792	bam	223.0 MB
EGAF00002298793	bam	2.1 MB
EGAF00002298794	bam	349.7 MB
EGAF00002298795	bam	361.1 MB
EGAF00002298796	bam	346.1 MB
EGAF00002298797	bam	370.0 MB
EGAF00002298798	bam	255.1 MB
EGAF00002298799	bam	350.4 MB
EGAF00002298800	bam	319.6 MB
EGAF00002298801	bam	303.7 MB
EGAF00002298802	bam	273.3 MB
EGAF00002298803	bam	162.2 MB
EGAF00002298804	bam	325.0 MB
EGAF00002298805	bam	332.4 MB
EGAF00002298806	bam	84.1 MB
EGAF00002298807	bam	235.5 MB
EGAF00002298808	bam	390.7 MB
EGAF00002298809	bam	382.6 kB
EGAF00002298810	bam	257.2 MB
EGAF00002298811	bam	304.6 MB
EGAF00002298812	bam	197.0 MB
EGAF00002298813	bam	367.0 MB
EGAF00002298814	bam	1.4 MB
EGAF00002298815	bam	640.8 kB
EGAF00002298816	bam	415.8 MB
EGAF00002298817	bam	437.3 MB
EGAF00002298818	bam	245.8 MB
EGAF00002298819	bam	260.5 MB
EGAF00002298820	bam	414.5 MB
EGAF00002298821	bam	472.6 MB
EGAF00002298822	bam	27.1 MB
EGAF00002298823	bam	204.4 MB
EGAF00002298824	bam	229.5 MB
EGAF00002298825	bam	388.0 MB
EGAF00002298826	bam	276.0 MB
EGAF00002298827	bam	486.0 kB
EGAF00002298828	bam	344.7 MB
EGAF00002298829	bam	14.1 MB
EGAF00002298878	bam	314.1 MB
EGAF00002298879	bam	545.9 kB
EGAF00002298880	bam	249.5 MB
EGAF00002298881	bam	272.8 MB
EGAF00002298882	bam	212.0 MB
EGAF00002298883	bam	289.2 MB
EGAF00002298884	bam	312.9 MB
EGAF00002298885	bam	251.4 MB
EGAF00002298886	bam	18.7 MB
EGAF00002298887	bam	2.8 MB
EGAF00002298888	bam	548.2 kB
EGAF00002298889	bam	117.2 MB
EGAF00002298890	bam	282.5 MB
EGAF00002298891	bam	438.5 MB
EGAF00002298892	bam	313.8 MB
EGAF00002298893	bam	356.0 MB
EGAF00002298894	bam	30.1 MB
EGAF00002298895	bam	676.7 kB
EGAF00002298896	bam	452.9 MB
EGAF00002298897	bam	8.3 MB
EGAF00002298898	bam	1.2 MB
EGAF00002298899	bam	1.1 MB
EGAF00002298900	bam	370.8 MB
EGAF00002298901	bam	997.6 kB
EGAF00002298902	bam	261.4 MB
EGAF00002298903	bam	20.3 MB
EGAF00002298904	bam	46.6 MB
EGAF00002298905	bam	266.7 MB
EGAF00002298906	bam	963.9 kB
EGAF00002298907	bam	271.2 MB
EGAF00002298908	bam	174.5 MB
EGAF00002298909	bam	479.8 kB
EGAF00002298910	bam	312.5 MB
EGAF00002298911	bam	199.5 MB
EGAF00002298912	bam	374.5 MB
EGAF00002298913	bam	203.6 MB
EGAF00002298914	bam	316.0 MB
EGAF00002298915	bam	235.3 MB
EGAF00002298916	bam	293.9 MB
EGAF00002298917	bam	845.6 kB
EGAF00002298918	bam	2.3 MB
EGAF00002298919	bam	250.0 MB
EGAF00002298920	bam	1.5 MB
EGAF00002298921	bam	215.3 MB
EGAF00002298922	bam	16.1 MB
EGAF00002298923	bam	325.8 MB
EGAF00002298924	bam	226.8 MB
EGAF00002298925	bam	41.6 MB
EGAF00002298974	bam	342.9 MB
EGAF00002298975	bam	198.5 MB
EGAF00002298976	bam	399.0 MB
EGAF00002298977	bam	1.8 MB
EGAF00002298978	bam	299.0 MB
EGAF00002298979	bam	473.5 MB
EGAF00002298980	bam	329.5 MB
EGAF00002298981	bam	33.5 MB
EGAF00002298982	bam	273.3 MB
EGAF00002298983	bam	132.3 MB
EGAF00002298984	bam	315.3 MB
EGAF00002298985	bam	243.6 MB
EGAF00002298986	bam	189.3 MB
EGAF00002298987	bam	323.0 MB
EGAF00002298988	bam	278.4 MB
EGAF00002298989	bam	938.8 kB
EGAF00002298990	bam	944.3 kB
EGAF00002298991	bam	3.3 MB
EGAF00002298992	bam	137.9 MB
EGAF00002298993	bam	299.7 MB
EGAF00002298994	bam	402.1 MB
EGAF00002298995	bam	375.3 MB
EGAF00002298996	bam	327.5 MB
EGAF00002298997	bam	318.5 MB
EGAF00002298998	bam	310.3 MB
EGAF00002298999	bam	385.1 MB
EGAF00002299000	bam	311.1 MB
EGAF00002299001	bam	271.2 MB
EGAF00002299002	bam	277.6 MB
EGAF00002299003	bam	32.0 MB
EGAF00002299004	bam	163.4 MB
EGAF00002299005	bam	300.0 MB
EGAF00002299006	bam	394.2 MB
EGAF00002299007	bam	223.6 MB
EGAF00002299008	bam	257.5 MB
EGAF00002299009	bam	124.4 MB
EGAF00002299010	bam	328.3 MB
EGAF00002299011	bam	417.7 MB
EGAF00002299012	bam	1.3 MB
EGAF00002299013	bam	334.2 MB
EGAF00002299014	bam	368.5 MB
EGAF00002299015	bam	269.8 MB
EGAF00002299016	bam	262.9 MB
EGAF00002299017	bam	212.1 MB
EGAF00002299018	bam	222.8 MB
EGAF00002299019	bam	337.3 MB
EGAF00002299020	bam	216.3 MB
EGAF00002299021	bam	346.7 MB
EGAF00002299070	bam	315.8 MB
EGAF00002299071	bam	260.5 MB
EGAF00002299072	bam	259.5 MB
EGAF00002299073	bam	234.2 MB
EGAF00002299074	bam	354.8 MB
EGAF00002299075	bam	413.9 MB
EGAF00002299076	bam	307.1 MB
EGAF00002299077	bam	573.3 kB
EGAF00002299078	bam	305.7 MB
EGAF00002299079	bam	320.3 MB
EGAF00002299080	bam	175.5 MB
EGAF00002299081	bam	443.4 MB
EGAF00002299082	bam	16.6 MB
EGAF00002299083	bam	16.7 MB
EGAF00002299084	bam	279.3 MB
EGAF00002299085	bam	392.4 MB
EGAF00002299086	bam	913.8 kB
EGAF00002299087	bam	46.3 MB
EGAF00002299088	bam	351.0 MB
EGAF00002299089	bam	401.5 MB
EGAF00002299090	bam	209.0 MB
EGAF00002299091	bam	12.3 MB
EGAF00002299092	bam	296.6 MB
EGAF00002299093	bam	256.3 MB
EGAF00002299094	bam	212.3 MB
EGAF00002299095	bam	400.1 MB
EGAF00002299096	bam	312.0 MB
EGAF00002299097	bam	207.1 MB
EGAF00002299098	bam	448.7 MB
EGAF00002299099	bam	333.5 MB
EGAF00002299100	bam	2.7 MB
EGAF00002299101	bam	417.7 MB
EGAF00002299102	bam	400.2 MB
EGAF00002299103	bam	241.6 MB
EGAF00002299104	bam	164.6 MB
EGAF00002299105	bam	383.7 MB
EGAF00002299106	bam	147.6 MB
EGAF00002299107	bam	226.5 MB
EGAF00002299108	bam	223.9 MB
EGAF00002299109	bam	368.8 MB
EGAF00002299110	bam	251.0 MB
EGAF00002299111	bam	344.3 MB
EGAF00002299112	bam	252.4 MB
EGAF00002299113	bam	328.7 MB
EGAF00002299114	bam	246.8 MB
EGAF00002299115	bam	397.4 MB
EGAF00002299116	bam	674.0 kB
EGAF00002299117	bam	207.1 MB
EGAF00002299166	bam	406.1 MB
EGAF00002299167	bam	1.6 MB
EGAF00002299168	bam	315.1 MB
EGAF00002299169	bam	235.5 MB
EGAF00002299170	bam	176.9 MB
EGAF00002299171	bam	761.0 kB
EGAF00002299172	bam	5.4 MB
EGAF00002299173	bam	319.6 MB
EGAF00002299174	bam	78.4 MB
EGAF00002299175	bam	1.6 MB
EGAF00002299176	bam	347.4 MB
EGAF00002299177	bam	1.7 MB
EGAF00002299178	bam	419.2 MB
EGAF00002299179	bam	256.4 MB
EGAF00002299180	bam	184.1 MB
EGAF00002299181	bam	162.1 MB
EGAF00002299182	bam	418.9 MB
EGAF00002299183	bam	2.1 MB
EGAF00002299184	bam	232.7 MB
EGAF00002299185	bam	28.4 MB
EGAF00002299186	bam	336.7 MB
EGAF00002299187	bam	682.0 kB
EGAF00002299188	bam	51.7 MB
EGAF00002299189	bam	142.2 MB
EGAF00002299190	bam	334.4 MB
EGAF00002299191	bam	180.7 MB
EGAF00002299192	bam	308.3 MB
EGAF00002299193	bam	15.2 MB
EGAF00002299194	bam	261.6 MB
EGAF00002299195	bam	56.4 MB
EGAF00002299258	bam	456.2 MB
EGAF00002299259	bam	1.1 MB
EGAF00002299260	bam	296.0 MB
EGAF00002299261	bam	164.7 MB
EGAF00002299262	bam	268.5 MB
EGAF00002299263	bam	267.7 MB
EGAF00002299264	bam	394.0 MB
EGAF00002299265	bam	214.2 MB
EGAF00002299266	bam	1.2 MB
EGAF00002299267	bam	325.7 MB
EGAF00002299268	bam	442.0 kB
EGAF00002299269	bam	282.2 MB
EGAF00002299270	bam	280.6 MB
EGAF00002299271	bam	300.0 MB
EGAF00002299272	bam	321.8 MB
EGAF00002299273	bam	150.8 MB
EGAF00002299274	bam	152.5 MB
EGAF00002299275	bam	121.1 MB
EGAF00002299276	bam	23.3 MB
EGAF00002299277	bam	263.0 MB
EGAF00002299278	bam	60.5 MB
EGAF00002299279	bam	30.3 MB
EGAF00002299280	bam	301.6 MB
EGAF00002299281	bam	346.6 MB
EGAF00002299351	bam	59.2 MB
EGAF00002299352	bam	32.4 MB
EGAF00002299353	bam	416.1 MB
EGAF00002299354	bam	230.9 MB
EGAF00002299355	bam	343.0 MB
EGAF00002299356	bam	28.2 MB
EGAF00002299357	bam	354.1 MB
EGAF00002299358	bam	278.3 MB
EGAF00002299359	bam	12.8 MB
EGAF00002299360	bam	444.4 MB
EGAF00002299361	bam	1.2 MB
EGAF00002299362	bam	259.8 MB
EGAF00002299363	bam	183.9 MB
EGAF00002299364	bam	407.7 MB
EGAF00002299365	bam	16.2 MB
EGAF00002299366	bam	415.9 MB
EGAF00002299367	bam	146.0 MB
EGAF00002299368	bam	403.1 MB
EGAF00002299369	bam	404.1 MB
EGAF00002299370	bam	201.9 MB
EGAF00002299371	bam	10.2 MB
EGAF00002299372	bam	443.4 MB
EGAF00002299373	bam	902.8 kB
EGAF00002299374	bam	176.9 MB
EGAF00002299375	bam	423.3 MB
EGAF00002299376	bam	140.9 MB
EGAF00002299377	bam	360.9 MB
EGAF00002299426	bam	347.5 MB
EGAF00002299427	bam	2.5 MB
EGAF00002299428	bam	889.3 kB
EGAF00002299429	bam	16.2 MB
EGAF00002299430	bam	348.3 MB
EGAF00002299431	bam	410.8 MB
EGAF00002299432	bam	191.6 MB
EGAF00002299433	bam	153.5 MB
EGAF00002299434	bam	261.3 MB
EGAF00002299435	bam	675.8 kB
EGAF00002299436	bam	228.5 MB
EGAF00002299437	bam	319.0 MB
EGAF00002299438	bam	373.7 MB
EGAF00002299439	bam	307.5 MB
EGAF00002299440	bam	265.0 MB
EGAF00002299441	bam	240.4 MB
EGAF00002299442	bam	296.9 MB
EGAF00002299443	bam	24.3 MB
EGAF00002299444	bam	73.1 MB
EGAF00002299445	bam	352.5 MB
EGAF00002299446	bam	295.5 MB
EGAF00002299447	bam	322.7 MB
EGAF00002299448	bam	1.0 MB
EGAF00002299449	bam	234.4 MB
EGAF00002299450	bam	365.6 MB
EGAF00002299451	bam	7.2 MB
EGAF00002299452	bam	167.9 MB
EGAF00002299453	bam	379.1 MB
EGAF00002299454	bam	220.3 MB
EGAF00002299455	bam	247.0 MB
EGAF00002299456	bam	279.5 MB
EGAF00002299457	bam	246.8 MB
EGAF00002299458	bam	314.2 MB
EGAF00002299459	bam	284.9 MB
EGAF00002299460	bam	22.5 MB
EGAF00002299461	bam	26.8 MB
EGAF00002299462	bam	370.8 MB
EGAF00002299463	bam	25.5 MB
EGAF00002299464	bam	394.8 MB
EGAF00002299465	bam	348.6 MB
EGAF00002299466	bam	307.4 MB
EGAF00002299467	bam	170.2 MB
EGAF00002299468	bam	292.9 MB
EGAF00002299469	bam	347.0 MB
EGAF00002299470	bam	17.7 MB
EGAF00002299471	bam	154.6 MB
EGAF00002299472	bam	404.4 MB
EGAF00002299473	bam	494.2 kB
EGAF00002299522	bam	352.7 MB
EGAF00002299523	bam	307.7 MB
EGAF00002299524	bam	18.0 MB
EGAF00002299525	bam	335.0 MB
EGAF00002299526	bam	143.9 MB
EGAF00002299527	bam	415.4 MB
EGAF00002299528	bam	25.3 MB
EGAF00002299529	bam	404.7 kB
EGAF00002299530	bam	143.7 MB
EGAF00002299531	bam	932.6 kB
EGAF00002299532	bam	411.5 MB
EGAF00002299533	bam	253.9 kB
EGAF00002299534	bam	369.7 MB
EGAF00002299535	bam	668.6 kB
EGAF00002299536	bam	267.4 MB
EGAF00002299537	bam	1.7 MB
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EGAF00002299539	bam	338.3 MB
EGAF00002299540	bam	346.7 MB
EGAF00002299541	bam	257.6 MB
EGAF00002299542	bam	403.1 MB
EGAF00002299543	bam	35.1 MB
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EGAF00002299546	bam	220.8 MB
EGAF00002299547	bam	177.7 MB
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EGAF00002299550	bam	3.1 MB
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EGAF00002299553	bam	397.0 MB
EGAF00002299554	bam	285.7 MB
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EGAF00002299557	bam	167.4 MB
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EGAF00002299559	bam	24.8 MB
EGAF00002299560	bam	283.1 MB
EGAF00002299561	bam	40.1 MB
EGAF00002299562	bam	315.8 MB
EGAF00002299563	bam	346.8 MB
EGAF00002299564	bam	21.4 MB
EGAF00002299565	bam	394.3 MB
EGAF00002299566	bam	1.3 MB
EGAF00002299567	bam	139.7 MB
EGAF00002299568	bam	178.8 MB
EGAF00002299569	bam	397.5 MB
EGAF00002299594	bam	244.5 MB
EGAF00002299595	bam	1.1 MB
EGAF00002299596	bam	416.5 MB
EGAF00002299597	bam	383.5 MB
EGAF00002299598	bam	629.8 kB
EGAF00002299599	bam	408.4 MB
EGAF00002299600	bam	584.1 kB
EGAF00002299601	bam	282.3 MB
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EGAF00002299603	bam	854.7 kB
EGAF00002299604	bam	314.6 MB
EGAF00002299605	bam	365.3 MB
EGAF00002299606	bam	395.6 MB
EGAF00002299607	bam	70.2 MB
EGAF00002299608	bam	35.5 MB
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EGAF00002299610	bam	955.3 kB
EGAF00002299611	bam	456.1 kB
EGAF00002299612	bam	330.0 MB
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EGAF00002299614	bam	313.6 MB
EGAF00002299615	bam	387.9 MB
EGAF00002299616	bam	313.4 MB
EGAF00002299617	bam	12.1 MB
EGAF00002299618	bam	297.7 MB
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EGAF00002299621	bam	738.2 kB
EGAF00002299622	bam	246.3 MB
EGAF00002299623	bam	377.7 MB
EGAF00002299624	bam	324.2 MB
EGAF00002299625	bam	275.0 MB
EGAF00002299626	bam	266.8 MB
EGAF00002299627	bam	1.2 MB
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EGAF00002299630	bam	10.5 MB
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EGAF00002299634	bam	298.9 MB
EGAF00002299635	bam	363.7 MB
EGAF00002299636	bam	27.2 MB
EGAF00002299637	bam	14.1 MB
EGAF00002299638	bam	148.2 MB
EGAF00002299639	bam	216.7 MB
EGAF00002299640	bam	406.0 MB
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EGAF00002299645	bam	241.8 MB
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EGAF00002299648	bam	297.4 MB
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EGAF00002299650	bam	392.4 MB
EGAF00002299651	bam	437.6 MB
EGAF00002299652	bam	160.9 MB
EGAF00002299653	bam	425.4 MB
EGAF00002299654	bam	285.9 MB
EGAF00002299655	bam	947.8 kB
EGAF00002299656	bam	427.7 MB
EGAF00002299657	bam	189.2 MB
EGAF00002299658	bam	1.7 MB
EGAF00002299659	bam	374.5 MB
EGAF00002299660	bam	168.7 MB
EGAF00002299661	bam	90.4 MB
EGAF00002299662	bam	349.1 MB
EGAF00002299663	bam	269.6 MB
EGAF00002299664	bam	226.6 MB
EGAF00002299665	bam	335.2 MB
EGAF00002299666	bam	316.1 MB
EGAF00002299667	bam	277.7 MB
EGAF00002299668	bam	318.7 MB
EGAF00002299669	bam	290.1 MB
EGAF00002299670	bam	337.9 MB
EGAF00002299671	bam	308.1 MB
EGAF00002299672	bam	281.4 MB
EGAF00002299673	bam	348.0 MB
EGAF00002299674	bam	456.8 MB
EGAF00002299675	bam	680.9 kB
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EGAF00002301807	bam	156.0 MB
EGAF00002301808	bam	147.2 MB
EGAF00002301809	bam	428.4 MB
EGAF00002301810	bam	331.7 MB
EGAF00002301811	bam	420.0 MB
EGAF00002301812	bam	293.7 kB
EGAF00002301813	bam	368.0 MB
EGAF00002301814	bam	147.3 MB
EGAF00002301815	bam	169.3 MB
EGAF00002301816	bam	37.7 MB
EGAF00002301817	bam	236.3 MB
EGAF00002301818	bam	185.2 MB
EGAF00002301819	bam	199.4 MB
EGAF00002301820	bam	264.5 MB
EGAF00002301821	bam	212.5 MB
EGAF00002301822	bam	443.6 MB
EGAF00002301823	bam	38.0 MB
EGAF00002301824	bam	339.8 MB
EGAF00002301825	bam	336.6 MB
EGAF00002301826	bam	35.7 MB
EGAF00002301827	bam	247.2 MB
EGAF00002301828	bam	346.0 MB
EGAF00002301829	bam	230.4 MB
EGAF00002301830	bam	321.5 MB
EGAF00002301831	bam	248.9 MB
EGAF00002301832	bam	360.6 MB
EGAF00002301833	bam	20.8 MB
EGAF00002301834	bam	244.1 MB
EGAF00002301835	bam	655.8 kB
EGAF00002301836	bam	240.2 MB
EGAF00002301837	bam	372.6 kB
EGAF00002301838	bam	1.0 MB
EGAF00002301839	bam	34.0 MB
EGAF00002301840	bam	151.2 MB
EGAF00002301841	bam	679.1 kB
EGAF00002301842	bam	242.8 MB
EGAF00002301843	bam	319.3 kB
EGAF00002301844	bam	349.5 MB
EGAF00002301845	bam	313.3 MB
EGAF00002301846	bam	272.9 MB
EGAF00002301847	bam	214.0 MB
EGAF00002301848	bam	149.1 MB
EGAF00002301849	bam	136.4 MB
EGAF00002301850	bam	45.9 MB
EGAF00002301851	bam	425.5 MB
EGAF00002301852	bam	1.5 MB
EGAF00002301853	bam	39.1 MB
EGAF00002301854	bam	757.5 kB
EGAF00002301855	bam	1.4 MB
EGAF00002301856	bam	198.5 MB
EGAF00002301857	bam	336.2 MB
EGAF00002301858	bam	407.8 MB
980 Files (207.3 GB)