Whole genomes sequencing BAM files (blood and lung brushings) of COPD cases and controls (EvA)
Dataset of 27 whole genome sequencing files (BAM), which cover 12 individuals out of which four suffer from COPD. From 9 individuals, there are sequencing data from blood and from lung brushings at one single site available, from another 3 there is additionally a lung brushing sequencing file from a second site available. Comparison of blood with lung brushings allows the calling of somatic mutations within a tissue.
- 27 samples
- DAC: EGAC00001001103
- Technology: Illumina MiSeq
Access to EvA COPD WGS data set
Applicants will be authorized by the DAC after having submitted a project describing the intended analysis. Users will obtain username and password for access, the credentials will be checked annually. Data are for the use within the approved project only and are not to be passed on to third parties.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002292719 | bam | 47.1 GB | ||
| EGAF00002292720 | bam | 34.5 GB | ||
| EGAF00002292721 | bam | 65.9 GB | ||
| EGAF00002292722 | bam | 17.0 GB | ||
| EGAF00002292723 | bam | 80.0 GB | ||
| EGAF00002292724 | bam | 40.9 GB | ||
| EGAF00002292725 | bam | 94.9 GB | ||
| EGAF00002292726 | bam | 28.9 GB | ||
| EGAF00002292727 | bam | 53.4 GB | ||
| EGAF00002292728 | bam | 46.3 GB | ||
| EGAF00002292729 | bam | 50.3 GB | ||
| EGAF00002292730 | bam | 35.5 GB | ||
| EGAF00002292731 | bam | 56.4 GB | ||
| EGAF00002292732 | bam | 49.4 GB | ||
| EGAF00002292733 | bam | 58.0 GB | ||
| EGAF00002292734 | bam | 53.4 GB | ||
| EGAF00002292735 | bam | 51.4 GB | ||
| EGAF00002292736 | bam | 37.8 GB | ||
| EGAF00002292737 | bam | 61.7 GB | ||
| EGAF00002292738 | bam | 60.6 GB | ||
| EGAF00002292739 | bam | 53.4 GB | ||
| EGAF00002292740 | bam | 72.9 GB | ||
| EGAF00002292741 | bam | 69.9 GB | ||
| EGAF00002292742 | bam | 72.9 GB | ||
| EGAF00002292743 | bam | 72.5 GB | ||
| EGAF00002292744 | bam | 83.5 GB | ||
| EGAF00002292745 | bam | 66.6 GB | ||
| 27 Files (1.5 TB) | ||||