Sequencing data of primary uveal melanomas and their matched metastases
We performed targeted DNA sequencing of primary uveal melanomas and their matched metastases from 35 patients, analyzing a total of 124 tissues. Sequencing was performed on an Illumina HiSeq 2500 instrument using a panel of 538 genes commonly involved in cancer. 124 BAM files were generated.
- 124 samples
- DAC: EGAC00001001063
- Technology: Illumina HiSeq 2500
Protokol nr.: H-2-2013-064 and 2016-331-1281
Protokol no.: H-2-2013-064 and 2016-331-1281 The Local scientific ethical comittee of the capital region of Denmark approved the conduction of the study and granted a waiver for informed consent, since the majority of the study subjects were allready deceased at the initiation of the study. The Dansih Data protection Agency waived the need for approval to submit study data to the EGA since the data was anonymised.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002233864 | bam | 585.4 MB | ||
| EGAF00002233865 | bam | 1.5 GB | ||
| EGAF00002233866 | bam | 1.3 GB | ||
| EGAF00002233867 | bam | 1.9 GB | ||
| EGAF00002233868 | bam | 4.2 GB | ||
| EGAF00002233869 | bam | 1.3 GB | ||
| EGAF00002233870 | bam | 4.6 GB | ||
| EGAF00002233871 | bam | 2.7 GB | ||
| EGAF00002233872 | bam | 4.6 GB | ||
| EGAF00002233873 | bam | 4.6 GB | ||
| EGAF00002233874 | bam | 2.8 GB | ||
| EGAF00002233875 | bam | 1.6 GB | ||
| EGAF00002233876 | bam | 2.7 GB | ||
| EGAF00002233877 | bam | 2.4 GB | ||
| EGAF00002233878 | bam | 101.1 MB | ||
| EGAF00002233879 | bam | 1.5 GB | ||
| EGAF00002233880 | bam | 2.5 GB | ||
| EGAF00002233881 | bam | 1.3 GB | ||
| EGAF00002233882 | bam | 1.6 GB | ||
| EGAF00002233883 | bam | 2.0 GB | ||
| EGAF00002233884 | bam | 112.7 MB | ||
| EGAF00002233885 | bam | 1.6 GB | ||
| EGAF00002233886 | bam | 1.8 GB | ||
| EGAF00002233887 | bam | 2.1 GB | ||
| EGAF00002233888 | bam | 2.6 GB | ||
| EGAF00002233889 | bam | 709.7 MB | ||
| EGAF00002233890 | bam | 3.9 GB | ||
| EGAF00002233891 | bam | 3.2 GB | ||
| EGAF00002233892 | bam | 399.7 MB | ||
| EGAF00002233893 | bam | 418.8 MB | ||
| EGAF00002233894 | bam | 989.3 MB | ||
| EGAF00002233895 | bam | 4.3 GB | ||
| EGAF00002233896 | bam | 1.7 GB | ||
| EGAF00002233897 | bam | 2.1 GB | ||
| EGAF00002233898 | bam | 1.3 GB | ||
| EGAF00002233899 | bam | 923.2 MB | ||
| EGAF00002233900 | bam | 1.2 GB | ||
| EGAF00002233901 | bam | 1.7 GB | ||
| EGAF00002233902 | bam | 66.9 MB | ||
| EGAF00002233903 | bam | 3.9 GB | ||
| EGAF00002233904 | bam | 2.5 GB | ||
| EGAF00002233905 | bam | 301.8 MB | ||
| EGAF00002233906 | bam | 1.7 GB | ||
| EGAF00002233907 | bam | 600.2 MB | ||
| EGAF00002233908 | bam | 1.7 GB | ||
| EGAF00002233909 | bam | 1.8 GB | ||
| EGAF00002233910 | bam | 1.4 GB | ||
| EGAF00002233911 | bam | 1.2 GB | ||
| EGAF00002233912 | bam | 1.7 GB | ||
| EGAF00002233913 | bam | 3.1 GB | ||
| EGAF00002233914 | bam | 3.6 GB | ||
| EGAF00002233915 | bam | 3.9 GB | ||
| EGAF00002233916 | bam | 415.9 MB | ||
| EGAF00002233917 | bam | 3.2 GB | ||
| EGAF00002233918 | bam | 3.6 GB | ||
| EGAF00002233919 | bam | 2.4 GB | ||
| EGAF00002233920 | bam | 2.8 GB | ||
| EGAF00002233921 | bam | 3.6 GB | ||
| EGAF00002233922 | bam | 1.7 GB | ||
| EGAF00002233923 | bam | 1.1 GB | ||
| EGAF00002233924 | bam | 590.7 MB | ||
| EGAF00002233925 | bam | 698.4 MB | ||
| EGAF00002233926 | bam | 893.8 MB | ||
| EGAF00002233927 | bam | 2.3 GB | ||
| EGAF00002233928 | bam | 4.1 GB | ||
| EGAF00002233929 | bam | 4.1 GB | ||
| EGAF00002233930 | bam | 2.1 GB | ||
| EGAF00002233931 | bam | 438.1 MB | ||
| EGAF00002233932 | bam | 1.1 GB | ||
| EGAF00002233933 | bam | 332.8 MB | ||
| EGAF00002233934 | bam | 1.8 GB | ||
| EGAF00002233935 | bam | 3.1 GB | ||
| EGAF00002233936 | bam | 76.3 MB | ||
| EGAF00002233937 | bam | 515.7 MB | ||
| EGAF00002233938 | bam | 711.2 MB | ||
| EGAF00002233939 | bam | 672.9 MB | ||
| EGAF00002233940 | bam | 568.9 MB | ||
| EGAF00002233941 | bam | 167.6 MB | ||
| EGAF00002233942 | bam | 151.3 MB | ||
| EGAF00002233943 | bam | 92.1 MB | ||
| EGAF00002233944 | bam | 184.2 MB | ||
| EGAF00002233945 | bam | 309.1 MB | ||
| EGAF00002233946 | bam | 1.7 GB | ||
| EGAF00002233947 | bam | 2.2 GB | ||
| EGAF00002233948 | bam | 2.4 GB | ||
| EGAF00002233949 | bam | 114.6 MB | ||
| EGAF00002233950 | bam | 108.5 MB | ||
| EGAF00002233951 | bam | 2.1 GB | ||
| EGAF00002233952 | bam | 1.8 GB | ||
| EGAF00002233953 | bam | 2.1 GB | ||
| EGAF00002233954 | bam | 763.1 MB | ||
| EGAF00002233955 | bam | 1.4 GB | ||
| EGAF00002233956 | bam | 524.4 MB | ||
| EGAF00002233957 | bam | 1.6 GB | ||
| EGAF00002233958 | bam | 1.9 GB | ||
| EGAF00002233959 | bam | 897.9 MB | ||
| EGAF00002233960 | bam | 2.6 GB | ||
| EGAF00002233961 | bam | 1.9 GB | ||
| EGAF00002233962 | bam | 1.6 GB | ||
| EGAF00002233963 | bam | 1.8 GB | ||
| EGAF00002233964 | bam | 2.5 GB | ||
| EGAF00002233965 | bam | 1.5 GB | ||
| EGAF00002233966 | bam | 1.2 GB | ||
| EGAF00002233967 | bam | 2.5 GB | ||
| EGAF00002233968 | bam | 1.3 GB | ||
| EGAF00002233969 | bam | 543.6 MB | ||
| EGAF00002233970 | bam | 1.8 GB | ||
| EGAF00002233971 | bam | 592.2 MB | ||
| EGAF00002233972 | bam | 1.6 GB | ||
| EGAF00002233973 | bam | 2.2 GB | ||
| EGAF00002233974 | bam | 1.9 GB | ||
| EGAF00002233975 | bam | 482.0 MB | ||
| EGAF00002233976 | bam | 451.4 MB | ||
| EGAF00002233977 | bam | 366.6 MB | ||
| EGAF00002233978 | bam | 2.2 GB | ||
| EGAF00002233979 | bam | 3.1 GB | ||
| EGAF00002233980 | bam | 1.4 GB | ||
| EGAF00002233981 | bam | 1.7 GB | ||
| EGAF00002233982 | bam | 2.4 GB | ||
| EGAF00002233983 | bam | 1.3 GB | ||
| EGAF00002233984 | bam | 1.8 GB | ||
| EGAF00002233985 | bam | 1.6 GB | ||
| EGAF00002233986 | bam | 1.9 GB | ||
| EGAF00002233987 | bam | 3.0 GB | ||
| 124 Files (215.2 GB) | ||||