RNAseq of human fetal pancreas development
The dataset comprises RNA-seq information of 4 subpopulations sorted from human fetal pancreas of 3 different donors. Low input libraries were generated using the Smart-seq2 protocol after Ampure XP cleanup of the total RNA extracted from the sorted cells. Libraries were multiplexed and sequenced paired-end over 2 lanes of HiSeq4000 each. Raw data was aligned to the human genome refernence GRCh37 using STAR v2.5.1b with GENCODE v19 as transcriptome reference, and unaligned reads were folded into the final uploaded bams.
- 12 samples
- DAC: EGAC00001001039
- Technology: Illumina HiSeq 4000
Foetal pancreas DAC
Policy text
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002051897 | bam | 2.6 GB | ||
| EGAF00002051898 | bam | 2.7 GB | ||
| EGAF00002051899 | bam | 2.2 GB | ||
| EGAF00002051900 | bam | 2.0 GB | ||
| EGAF00002051901 | bam | 2.1 GB | ||
| EGAF00002051902 | bam | 2.3 GB | ||
| EGAF00002051903 | bam | 2.0 GB | ||
| EGAF00002051904 | bam | 2.1 GB | ||
| EGAF00002051905 | bam | 2.1 GB | ||
| EGAF00002051906 | bam | 2.1 GB | ||
| EGAF00002051907 | bam | 2.1 GB | ||
| EGAF00002051908 | bam | 2.0 GB | ||
| 12 Files (26.1 GB) | ||||