Patient-derived neuroblastoma model system OHC-NB1
The dataset is comprised of seven samples, one blood sample (germline control) of the patient, one neuroblastoma metastasis from the bone marrow and five derived cell models. The models include the primary culture, the first xenogenograft passage, a monolayer culture derived from the first xenograft passage and two samples of the fourth xenograft passage, cells and supernatant. For all these samples, whole-exome sequencing data have been generated. The BAM files contain the alignments against the human genome, assembly GRCh37, and also the unaligned reads.
- 7 samples
- DAC: EGAC00001000923
- Technology: Illumina HiSeq 4000
OHC-NB1 data access policy
Access to the raw data is managed by the data access committee. To request access, a principal investigator (PI) needs to provide a brief description (1-2 paragraphs) of the planned research project to the data access committee. PIs that have been granted access by the data access committee may enable members of their research group to access the data but are not allowed to further distribute any of the data files.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00002015496 | bam | 5.2 GB | ||
| EGAF00002015497 | bam | 6.1 GB | ||
| EGAF00002015498 | bam | 6.4 GB | ||
| EGAF00002015499 | bam | 5.2 GB | ||
| EGAF00002015500 | bam | 5.0 GB | ||
| EGAF00002015501 | bam | 7.6 GB | ||
| EGAF00002015502 | bam | 7.2 GB | ||
| 7 Files (42.7 GB) | ||||